17-79994910-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79994910
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79994910
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 17808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.166-21A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000584318
  gene symbol: DCXR
  hgvsc: ENST00000584318.1:n.142+55A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.172-21A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.308A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.250-21A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585085
  gene symbol: DCXR
  hgvsc: ENST00000585085.1:n.309A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.565A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.70-21A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.146-21A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.151-21A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000582613
  gene symbol: DCXR
  hgvsc: ENST00000582613.1:n.276A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.51-21A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.150-21A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.145-21A>C
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 34818
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-79994918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79994918
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79994918
    reference: chr 17
allele count: 2
allele frequency: 1.159151501101194e-4
allele num: 17254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.51-29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000582613
  gene symbol: DCXR
  hgvsc: ENST00000582613.1:n.268C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000584318
  gene symbol: DCXR
  hgvsc: ENST00000584318.1:n.142+47C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.150-29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.145-29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.146-29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.166-29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.70-29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.300C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585085
  gene symbol: DCXR
  hgvsc: ENST00000585085.1:n.301C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.151-29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.557C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.250-29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.172-29C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

17-79994939-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79994939
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79994939
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 16440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.279G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.166-50G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.51-50G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585085
  gene symbol: DCXR
  hgvsc: ENST00000585085.1:n.280G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000582613
  gene symbol: DCXR
  hgvsc: ENST00000582613.1:n.247G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.145-50G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000584318
  gene symbol: DCXR
  hgvsc: ENST00000584318.1:n.142+26G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.536G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.70-50G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.172-50G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.250-50G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.151-50G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.146-50G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.150-50G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-79995290-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995290
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995290
    reference: chr 17
allele count: 1
allele frequency: 9.423294383716548e-5
allele num: 10612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+217G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.185G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+200G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+36G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24228
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

17-79995292-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995292
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995292
    reference: chr 17
allele count: 2
allele frequency: 1.882530120481928e-4
allele num: 10624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+198G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.183G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+215G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+34G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS

17-79995293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995293
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995293
    reference: chr 17
allele count: 1
allele frequency: 9.40379913485048e-5
allele num: 10634
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+33G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+33G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+33G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.182G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+33G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+197G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+33G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+33G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+33G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+214G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+33G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

17-79995298-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995298
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995298
    reference: chr 17
allele count: 16
allele frequency: 1.50065653723504e-3
allele num: 10662
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+28G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+28G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+28G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+209G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+28G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+28G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+192G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.177G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+28G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+28G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+28G>C
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

17-79995304-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995304
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995304
    reference: chr 17
allele count: 1
allele frequency: 9.324878776575905e-5
allele num: 10724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+186C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+22C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+22C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+22C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+22C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+22C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.171C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+203C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+22C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+22C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+22C>A
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

17-79995305-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995305
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995305
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 10734
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+21G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+21G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+202G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+21G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+21G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+21G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+185G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+21G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.170G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+21G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+21G>C
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28088
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/17-79995313-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995313
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995313
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 10794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+13G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+13G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+13G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+13G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.162G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+13G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+177G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+13G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+13G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+194G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+13G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 30141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

17-79995315-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995315
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995314
    reference: chr 17
allele count: 1
allele frequency: 9.250693802035152e-5
allele num: 10810
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+10delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+10delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.159delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+10delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+10delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+10delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+10delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+191delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+10delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+10delG
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+174delG
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: GC
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/17-79995316-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995316
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995316
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 10806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+10G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+191G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+10G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+10G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+10G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+174G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.159G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+10G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+10G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+10G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+10G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

17-79995320-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995320
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995320
    reference: chr 17
allele count: 624
allele frequency: 5.655247417074497e-2
allele num: 11034
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.150+6T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+187T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.149+6T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.253+6T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.249+6T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.171+6T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.144+6T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+170T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.145+6T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.165+6T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.155T>C
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 7.5e0
  variant carriers: 746
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 29182
  bin: 2.5e0
  variant carriers: 815
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
hgvs: c.150+6T>C
num of homozygotes: 65
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-79995328-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995328
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995328
    reference: chr 17
allele count: 1
allele frequency: 9.053050878145935e-5
allele num: 11046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.147G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.148G>T
  hgvsp: ENSP00000303356.2:p.Glu50Ter
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.247G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.143G>T
  hgvsp: ENSP00000464507.1:p.Glu49Ter
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+162G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.163G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.169G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.142G>T
  hgvsp: ENSP00000462272.1:p.Glu48Ter
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.251G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.147G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+179G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu50Ter
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-79995330-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995330
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995330
    reference: chr 17
allele count: 1
allele frequency: 9.041591320072333e-5
allele num: 11060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.161G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.145G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.146G>T
  hgvsp: ENSP00000303356.2:p.Arg49Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.140G>T
  hgvsp: ENSP00000462272.1:p.Arg47Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.249G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.141G>T
  hgvsp: ENSP00000464507.1:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+177G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.245G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+160G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.145G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.167G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34893
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg49Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

17-79995342-T-TCAAGATCCGCCTGAGTCCGGCTCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995342
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995366
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 11260
alternate allele: TCAAGATCCGCCTGAGTCCGGCTCA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsp: ENSP00000464507.1:p.Val36_Leu43dup
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsp: ENSP00000462272.1:p.Val35_Leu42dup
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsp: ENSP00000303356.2:p.Val37_Leu44dup
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: inframe insertion
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7955
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val37_Leu44dup
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

17-79995348-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995348
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995348
    reference: chr 17
allele count: 1
allele frequency: 8.805917576611483e-5
allele num: 11356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.231A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.123A>G
  hgvsp: ENSP00000464507.1:p.Asp42Gly
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.127A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.128A>G
  hgvsp: ENSP00000303356.2:p.Asp43Gly
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.122A>G
  hgvsp: ENSP00000462272.1:p.Asp41Gly
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+142A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.143A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.227A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.149A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.127A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+159A>G
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Asp43Gly
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-79995349-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995349
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995349
    reference: chr 17
allele count: 3
allele frequency: 2.638058389025677e-4
allele num: 11372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+158G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.230G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.148G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.121G>T
  hgvsp: ENSP00000462272.1:p.Asp41Tyr
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.127G>T
  hgvsp: ENSP00000303356.2:p.Asp43Tyr
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.142G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.122G>T
  hgvsp: ENSP00000464507.1:p.Asp42Tyr
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.126G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+141G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.226G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.126G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35036
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10351
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp43Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

17-79995356-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995356
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995356
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 11618
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.119T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.114T>C
  hgvsp: ENST00000582900.1:c.114T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.119T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.115T>C
  hgvsp: ENST00000581584.1:c.115T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.120T>C
  hgvsp: ENST00000306869.2:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.223T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.135T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.141T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+151T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+134T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.219T>C
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13316
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr40Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

17-79995358-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995358
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995358
    reference: chr 17
allele count: 10
allele frequency: 8.595495960116899e-4
allele num: 11634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.113A>G
  hgvsp: ENSP00000464507.1:p.Thr39Ala
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.118A>G
  hgvsp: ENSP00000303356.2:p.Thr40Ala
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.221A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.139A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+149A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.133A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.117A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.112A>G
  hgvsp: ENSP00000462272.1:p.Thr38Ala
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.117A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+132A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.217A>G
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32845
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13922
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr40Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

17-79995358-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995358
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995358
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 11634
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.113A>C
  hgvsp: ENSP00000464507.1:p.Thr39Pro
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+149A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.117A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+132A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.133A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.221A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.118A>C
  hgvsp: ENSP00000303356.2:p.Thr40Pro
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.117A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.112A>C
  hgvsp: ENSP00000462272.1:p.Thr38Pro
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.217A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.139A>C
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13922
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32845
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr40Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

17-79995358-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995358
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995358
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 11634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.139A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.117A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.221A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.112A>T
  hgvsp: ENSP00000462272.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.133A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.118A>T
  hgvsp: ENSP00000303356.2:p.Thr40Ser
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.217A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+132A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.113A>T
  hgvsp: ENSP00000464507.1:p.Thr39Ser
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+149A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.117A>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13922
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32845
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr40Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

17-79995361-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995361
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995361
    reference: chr 17
allele count: 1
allele frequency: 8.530967411704488e-5
allele num: 11722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+146C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.115C>T
  hgvsp: ENSP00000303356.2:p.Arg39Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.109C>T
  hgvsp: ENSP00000462272.1:p.Arg37Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.110C>T
  hgvsp: ENSP00000464507.1:p.Arg38Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.218C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.136C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.114C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.114C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.214C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.130C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+129C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg39Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

17-79995361-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995361
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995361
    reference: chr 17
allele count: 1
allele frequency: 8.530967411704488e-5
allele num: 11722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.214C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.114C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+129C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.130C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+146C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.114C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.110C>A
  hgvsp: ENST00000581584.1:c.110C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.115C>A
  hgvsp: ENST00000306869.2:c.115C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.218C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.109C>A
  hgvsp: ENST00000582900.1:c.109C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.136C>A
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15166
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Arg39Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-79995362-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995362
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995362
    reference: chr 17
allele count: 1
allele frequency: 8.528057308545113e-5
allele num: 11726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.113C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.217C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.109C>T
  hgvsp: ENST00000581584.1:c.109C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.113C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.213C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+128C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.108C>T
  hgvsp: ENST00000582900.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.129C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.114C>T
  hgvsp: ENST00000306869.2:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+145C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.135C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31644
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser38Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-79995376-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995376
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995376
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 12286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.95G>C
  hgvsp: ENSP00000464507.1:p.Val33Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.203G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.115G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.94G>C
  hgvsp: ENSP00000462272.1:p.Val32Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.99G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.100G>C
  hgvsp: ENSP00000303356.2:p.Val34Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.121G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.199G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+131G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.99G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+114G>C
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29557
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17886
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val34Leu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-79995378-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995378
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995378
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 12360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.92G>T
  hgvsp: ENSP00000462272.1:p.Arg31Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.97G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.98G>T
  hgvsp: ENSP00000303356.2:p.Arg33Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.97G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.113G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.201G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+112G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.197G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.93G>T
  hgvsp: ENSP00000464507.1:p.Arg32Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.119G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+129G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18333
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg33Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

17-79995387-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995387
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995387
    reference: chr 17
allele count: 2
allele frequency: 1.586294416243655e-4
allele num: 12608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.192C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+120C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.84C>T
  hgvsp: ENSP00000464507.1:p.Thr29Met
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.110C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.83C>T
  hgvsp: ENSP00000462272.1:p.Thr28Met
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.88C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.88C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.89C>T
  hgvsp: ENSP00000303356.2:p.Thr30Met
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.188C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+103C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.104C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19342
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr30Met
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

17-79995429-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995429
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995429
    reference: chr 17
allele count: 1
allele frequency: 7.335680751173709e-5
allele num: 13632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.150C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.53-6C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.48-6C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+61C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.146C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.52-6C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+78C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.80-12C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.68-6C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.52-6C>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.53-12C>G
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27979
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.53-6C>G
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

17-79995431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995431
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995431
    reference: chr 17
allele count: 106
allele frequency: 7.688959814304367e-3
allele num: 13786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.68-8C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.52-8C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.52-8C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.48-8C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.53-8C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.53-14C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.144C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.148C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+76C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+59C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.80-14C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27695
  bin: 2.5e0
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20736
  bin: 7.5e0
  variant carriers: 254
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.53-8C>T
num of homozygotes: 7
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

17-79995454-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995454
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995454
    reference: chr 17
allele count: 7
allele frequency: 4.576958284294494e-4
allele num: 15294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.53-37G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.125G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.52-31G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.52-31G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.121G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.53-31G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.48-31G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+36G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.68-31G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+53G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.80-37G>C
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23474
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

17-79995457-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995457
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995457
    reference: chr 17
allele count: 1
allele frequency: 6.555657532450504e-5
allele num: 15254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.118C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+50C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.68-34C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.52-34C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.80-40C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.53-40C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.52-34C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.122C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+33C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.48-34C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.53-34C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24060
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/17-79995459-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995459
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995459
    reference: chr 17
allele count: 4
allele frequency: 2.362669816893089e-4
allele num: 16930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.80-42G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.120G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.53-42G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.116G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.52-36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.52-36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+31G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.48-36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+48G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.68-36G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.53-36G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24169
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

17-79995461-GCCTCTGCCCGCCGCCGGCCTTTGCCCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995461
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995434
    reference: chr 17
allele count: 2
allele frequency: 1.141813199360585e-4
allele num: 17516
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: splice donor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2927
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: GCCTCTGCCCGCCGCCGGCCTTTGCCCA
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD

17-79995466-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995466
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995466
    reference: chr 17
allele count: 258
allele frequency: 1.376734258271078e-2
allele num: 18740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51+41A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47+41A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52+41A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67+41A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52+41A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51+41A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+24A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79+41A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+41A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.109A>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.113A>C
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20595
  bin: 2.5e0
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26168
  bin: 7.5e0
  variant carriers: 385
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 1.25e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21471
  bin: 2.25e1
  variant carriers: 37
num of homozygotes: 16
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

17-79995471-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995471
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995471
    reference: chr 17
allele count: 1
allele frequency: 5.092686901609289e-5
allele num: 19636
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51+36C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52+36C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52+36C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.108C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+19C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.104C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79+36C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51+36C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67+36C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47+36C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+36C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18834
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

17-79995487-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995487
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995487
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 24612
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52+20G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52+20G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+20G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51+20G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47+20G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.92G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.69+3G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67+20G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79+20G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.88G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51+20G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 12652
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28576
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 8.25e1
  variant carriers: 0
hgvs: c.69+3G>A
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

17-79995490-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995490
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995492
    reference: chr 17
allele count: 6858
allele frequency: 1.990942344539279e-1
allele num: 34446
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51+15_51+16dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.67_68dupAA
  hgvsp: ENSP00000462226.1:p.Cys24SerfsTer5
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.83_84dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51+15_51+16dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+15_50+16dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.87_88dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67+15_67+16dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47+15_47+16dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79+15_79+16dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52+15_52+16dupAA
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52+15_52+16dupAA
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 2.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.25e1
  variant carriers: 410
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 1.75e1
  variant carriers: 1596
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 1.25e1
  variant carriers: 3614
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 29288
  bin: 7.5e0
  variant carriers: 3529
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 2.5e0
  variant carriers: 487
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 1.25e1
  variant carriers: 174
hgvs: p.Cys24SerfsTer5
num of homozygotes: 728
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum

17-79995493-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995493
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995493
    reference: chr 17
allele count: 3
allele frequency: 8.486082824168364e-5
allele num: 35352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51+14A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.82A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.66A>G
  hgvsp: ENST00000579155.1:c.66A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+14A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79+14A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67+14A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51+14A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52+14A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47+14A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.86A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52+14A>G
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29523
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly22Gly
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

17-79995494-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995494
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995494
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 35506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.65G>A
  hgvsp: ENSP00000462226.1:p.Gly22Glu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52+13G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+13G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47+13G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51+13G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.85G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67+13G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79+13G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51+13G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.81G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52+13G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10129
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29507
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly22Glu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

17-79995498-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995498
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995498
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 37760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51+9C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51+9C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+9C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67+9C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.77C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47+9C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79+9C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.81C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.61C>T
  hgvsp: ENSP00000462226.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52+9C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52+9C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29348
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg21Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

17-79995506-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995506
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995506
    reference: chr 17
allele count: 18
allele frequency: 4.137360364087712e-4
allele num: 43506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47+1G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52+1G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51+1G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.73G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.69G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51+1G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79+1G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.53G>A
  hgvsp: ENSP00000462226.1:p.Gly18Asp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52+1G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67+1G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50+1G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7475
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28829
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7522
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7237
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 2.5e0
  variant carriers: 0
hgvs: c.52+1G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-79995507-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995507
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995507
    reference: chr 17
allele count: 3
allele frequency: 6.818801709246295e-5
allele num: 43996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.52G>T
  hgvsp: ENSP00000462226.1:p.Gly18Cys
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.50G>T
  hgvsp: ENSP00000462725.1:p.Lys17Asn
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.47G>T
  hgvsp: ENSP00000464507.1:p.Gly17Cys
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.67G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.51G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.79G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.68G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.52G>T
  hgvsp: ENSP00000303356.2:p.Gly18Cys
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.51G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.52G>T
  hgvsp: ENSP00000462272.1:p.Gly18Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.72G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28655
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly18Cys
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-79995519-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995519
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995519
    reference: chr 17
allele count: 1
allele frequency: 1.98294665873488e-5
allele num: 50430
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.39G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.56G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.35G>C
  hgvsp: ENSP00000464507.1:p.Gly13Arg
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.38G>C
  hgvsp: ENST00000577712.1:c.38G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.60G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.40G>C
  hgvsp: ENSP00000462272.1:p.Gly14Arg
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.39G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.40G>C
  hgvsp: ENSP00000462226.1:p.Gly14Arg
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.40G>C
  hgvsp: ENSP00000303356.2:p.Gly14Arg
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.55G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.67G>C
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11831
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly14Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

17-79995519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995519
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995519
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 50430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.39G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.39G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.56G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.35G>A
  hgvsp: ENSP00000464507.1:p.Gly13Arg
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.40G>A
  hgvsp: ENSP00000462272.1:p.Gly14Arg
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.40G>A
  hgvsp: ENSP00000462226.1:p.Gly14Arg
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.55G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.60G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.40G>A
  hgvsp: ENSP00000303356.2:p.Gly14Arg
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.38G>A
  hgvsp: ENST00000577712.1:c.38G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.67G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26618
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly14Arg
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

17-79995528-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995528
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995528
    reference: chr 17
allele count: 1
allele frequency: 1.887575974932991e-5
allele num: 52978
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.31C>A
  hgvsp: ENSP00000462272.1:p.Leu11Met
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.30C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.31C>A
  hgvsp: ENSP00000462226.1:p.Leu11Met
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.31C>A
  hgvsp: ENSP00000303356.2:p.Leu11Met
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.58C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.51C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.29C>A
  hgvsp: ENSP00000462725.1:p.Cys10Ter
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.30C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.26C>A
  hgvsp: ENSP00000464507.1:p.Leu10Met
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.47C>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.46C>A
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25650
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6414
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys10Ter
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-79995531-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995531
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995531
    reference: chr 17
allele count: 1
allele frequency: 1.863446630888491e-5
allele num: 53664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.28G>T
  hgvsp: ENSP00000462272.1:p.Val10Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.23G>T
  hgvsp: ENSP00000464507.1:p.Val9Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.27G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.26G>T
  hgvsp: ENST00000577712.1:c.26G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.44G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.55G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.28G>T
  hgvsp: ENSP00000462226.1:p.Val10Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.27G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.48G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.43G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.28G>T
  hgvsp: ENSP00000303356.2:p.Val10Leu
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5919
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val10Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

17-79995534-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995534
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995534
    reference: chr 17
allele count: 2
allele frequency: 3.681342953909586e-5
allele num: 54328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.24C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.45C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.40C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.52C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.25C>T
  hgvsp: ENSP00000303356.2:p.Arg9Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.25C>T
  hgvsp: ENSP00000462272.1:p.Arg9Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.23C>T
  hgvsp: ENST00000577712.1:c.23C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.25C>T
  hgvsp: ENSP00000462226.1:p.Arg9Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.20C>T
  hgvsp: ENSP00000464507.1:p.Arg8Trp
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.24C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.41C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg9Trp
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

17-79995535-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995535
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995535
    reference: chr 17
allele count: 476
allele frequency: 8.662105109914107e-3
allele num: 54952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.24C>T
  hgvsp: ENST00000579155.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.39C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.51C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.24C>T
  hgvsp: ENST00000306869.2:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.44C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.23C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.24C>T
  hgvsp: ENST00000582900.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.40C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.22C>T
  hgvsp: ENSP00000462725.1:p.Ala8Val
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.19C>T
  hgvsp: ENST00000581584.1:c.19C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.23C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 1.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 1.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 2.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5800
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13145
  bin: 2.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24837
  bin: 7.5e0
  variant carriers: 75
genotype quality: GenotypeQuality
hgvs: p.Ala8Val
num of homozygotes: 22
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

17-79995537-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995537
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995537
    reference: chr 17
allele count: 2
allele frequency: 3.628052098828139e-5
allele num: 55126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.22C>T
  hgvsp: ENSP00000462226.1:p.Arg8Cys
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.49C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.21C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.22C>T
  hgvsp: ENSP00000303356.2:p.Arg8Cys
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.42C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.20C>T
  hgvsp: ENST00000577712.1:c.20C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.37C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.21C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.38C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.22C>T
  hgvsp: ENSP00000462272.1:p.Arg8Cys
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.17C>T
  hgvsp: ENSP00000464507.1:p.Arg7Cys
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13159
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg8Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

17-79995538-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995538
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995538
    reference: chr 17
allele count: 142
allele frequency: 2.565028901734104e-3
allele num: 55360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.48C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.20C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.41C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.19C>T
  hgvsp: ENSP00000462725.1:p.Ala7Val
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.36C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.21C>T
  hgvsp: ENST00000306869.2:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.20C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.21C>T
  hgvsp: ENST00000582900.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.16C>T
  hgvsp: ENST00000581584.1:c.16C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.21C>T
  hgvsp: ENST00000579155.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.37C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 1.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24617
  bin: 7.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 13323
  bin: 2.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala7Val
num of homozygotes: 1
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: QD

17-79995540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995540
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995540
    reference: chr 17
allele count: 1
allele frequency: 1.797397368610252e-5
allele num: 55636
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.19G>A
  hgvsp: ENSP00000462226.1:p.Gly7Ser
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.18G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.19G>A
  hgvsp: ENSP00000462272.1:p.Gly7Ser
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.39G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.35G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.14G>A
  hgvsp: ENSP00000464507.1:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.19G>A
  hgvsp: ENSP00000303356.2:p.Gly7Ser
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.18G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.46G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.17G>A
  hgvsp: ENST00000577712.1:c.17G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly7Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

17-79995541-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995541
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995541
    reference: chr 17
allele count: 2
allele frequency: 3.586286042174724e-5
allele num: 55768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.17G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.33G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.16G>A
  hgvsp: ENSP00000462725.1:p.Arg6Gln
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.18G>A
  hgvsp: ENST00000579155.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.13G>A
  hgvsp: ENST00000581584.1:c.13G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.18G>A
  hgvsp: ENST00000582900.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.45G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.34G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.17G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.18G>A
  hgvsp: ENST00000306869.2:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.38G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13259
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg6Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

17-79995544-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995544
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995544
    reference: chr 17
allele count: 3
allele frequency: 5.363847666726265e-5
allele num: 55930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.30C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.15C>T
  hgvsp: ENST00000306869.2:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.13C>T
  hgvsp: ENSP00000462725.1:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.15C>T
  hgvsp: ENST00000579155.1:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.14C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.10C>T
  hgvsp: ENST00000581584.1:c.10C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.15C>T
  hgvsp: ENST00000582900.1:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.35C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.14C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.42C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.31C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser5Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS

17-79995545-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995545
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995544
    reference: chr 17
allele count: 1
allele frequency: 1.780309773900659e-5
allele num: 56170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.29delC
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.12delC
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.13delC
  hgvsp: ENSP00000303356.2:p.Leu5SerfsTer15
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.8delC
  hgvsp: ENSP00000464507.1:p.Leu4SerfsTer15
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.28delC
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.11delC
  hgvsp: ENSP00000462725.1:p.Ser5ArgfsTer17
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.40delC
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.13delC
  hgvsp: ENSP00000462272.1:p.Leu5SerfsTer31
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.12delC
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.13delC
  hgvsp: ENSP00000462226.1:p.Leu5SerfsTer23
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.33delC
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu5SerfsTer15
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: AG
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

17-79995546-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995546
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995546
    reference: chr 17
allele count: 2
allele frequency: 3.560239248077471e-5
allele num: 56176
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.13C>T
  hgvsp: ENSP00000303356.2:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.13C>T
  hgvsp: ENSP00000462226.1:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.11C>T
  hgvsp: ENST00000577712.1:c.11C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.29C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.12C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.8C>T
  hgvsp: ENSP00000464507.1:p.Leu4Phe
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.12C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.33C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.13C>T
  hgvsp: ENSP00000462272.1:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.40C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.28C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu5Phe
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

17-79995547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995547
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995547
    reference: chr 17
allele count: 2
allele frequency: 3.565189489821384e-5
allele num: 56098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.12C>T
  hgvsp: ENST00000579155.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.28C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.11C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.32C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.39C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.7C>T
  hgvsp: ENST00000581584.1:c.7C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.12C>T
  hgvsp: ENST00000306869.2:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.27C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.12C>T
  hgvsp: ENST00000582900.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.11C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.10C>T
  hgvsp: ENSP00000462725.1:p.Ser4Phe
  variant of: http://identifiers.org/hgnc/18985
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12952
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser4Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

17-79995549-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995549
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995549
    reference: chr 17
allele count: 36
allele frequency: 6.422378420808506e-4
allele num: 56054
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.9T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.30T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.25T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.10T>C
  hgvsp: ENSP00000462226.1:p.Phe4Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.26T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000464507
  ensembl transcript: ENST00000581584
  gene symbol: DCXR
  hgvsc: ENST00000581584.1:c.5T>C
  hgvsp: ENSP00000464507.1:p.Phe3Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.10T>C
  hgvsp: ENSP00000303356.2:p.Phe4Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.10T>C
  hgvsp: ENSP00000462272.1:p.Phe4Leu
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.37T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.9T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.8T>C
  hgvsp: ENST00000577712.1:c.8T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7645
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12570
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24199
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe4Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

17-79995554-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995554
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995554
    reference: chr 17
allele count: 1
allele frequency: 1.818115704883459e-5
allele num: 55002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.25A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.5A>G
  hgvsp: ENSP00000303356.2:p.Glu2Gly
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.5A>G
  hgvsp: ENSP00000462272.1:p.Glu2Gly
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.32A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.5A>G
  hgvsp: ENSP00000462226.1:p.Glu2Gly
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.21A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.4A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462725
  ensembl transcript: ENST00000577712
  gene symbol: DCXR
  hgvsc: ENST00000577712.1:c.3A>G
  hgvsp: ENSP00000462725.1:p.Ser2Gly
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.20A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.4A>G
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29647
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu2Gly
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

17-79995557-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995557
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995557
    reference: chr 17
allele count: 5
allele frequency: 9.237704615157226e-5
allele num: 54126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.18T>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578885
  gene symbol: DCXR
  hgvsc: ENST00000578885.1:n.1T>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000579334
  gene symbol: DCXR
  hgvsc: ENST00000579334.1:n.1T>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.29T>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.22T>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.2T>A
  hgvsp: ENSP00000462272.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.2T>A
  hgvsp: ENSP00000462226.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.17T>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.2T>A
  hgvsp: ENSP00000303356.2:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24125
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6917
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9185
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9889
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1516
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30275
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

17-79995558-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995558
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995558
    reference: chr 17
allele count: 1
allele frequency: 1.846517468055248e-5
allele num: 54156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.17A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.21A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.1A>T
  hgvsp: ENSP00000303356.2:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.16A>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.1A>T
  hgvsp: ENSP00000462272.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.1A>T
  hgvsp: ENSP00000462226.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.28A>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24118
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9908
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD

17-79995558-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995558
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995558
    reference: chr 17
allele count: 1
allele frequency: 1.846517468055248e-5
allele num: 54156
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.1A>G
  hgvsp: ENSP00000303356.2:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.1A>G
  hgvsp: ENSP00000462272.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.28A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.16A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.1A>G
  hgvsp: ENSP00000462226.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.21A>G
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.17A>G
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24118
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9908
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30363
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6909
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

17-79995561-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995561
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995561
    reference: chr 17
allele count: 1
allele frequency: 1.875539217525038e-5
allele num: 53318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.13G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.-3G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.18G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.-3G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462272
  ensembl transcript: ENST00000582900
  gene symbol: DCXR
  hgvsc: ENST00000582900.1:c.-3G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.14G>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.25G>C
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23966
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10627
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7283
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30648
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-79995564-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995564
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995564
    reference: chr 17
allele count: 1
allele frequency: 1.932068472506666e-5
allele num: 51758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.15G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.10G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.22G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.11G>A
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.-6G>A
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7973
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30873
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8014
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

17-79995565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995565
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995565
    reference: chr 17
allele count: 9
allele frequency: 1.755481001794492e-4
allele num: 51268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.14C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.9C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000462226
  ensembl transcript: ENST00000579155
  gene symbol: DCXR
  hgvsc: ENST00000579155.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.10C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.-7C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.21C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12311
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23640
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1794
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6559
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

17-79995567-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995567
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995567
    reference: chr 17
allele count: 1
allele frequency: 1.935508845275423e-5
allele num: 51666
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.7T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.8T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.19T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.-9T>C
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.12T>C
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31439
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6349
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8279
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

17-79995568-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995568
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995568
    reference: chr 17
allele count: 1
allele frequency: 1.947192148921256e-5
allele num: 51356
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.-10C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.18C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.6C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.11C>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.7C>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23635
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1901
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5907
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31413
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8452
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/17-79995570-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995570
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995570
    reference: chr 17
allele count: 4
allele frequency: 8.087016295337835e-5
allele num: 49462
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169738
  ensembl protein: ENSP00000303356
  ensembl transcript: ENST00000306869
  gene symbol: DCXR
  hgvsc: ENST00000306869.2:c.-12G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000578273
  gene symbol: DCXR
  hgvsc: ENST00000578273.1:n.9G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580320
  gene symbol: DCXR
  hgvsc: ENST00000580320.1:n.5G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000580750
  gene symbol: DCXR
  hgvsc: ENST00000580750.1:n.4G>T
  variant of: http://identifiers.org/hgnc/18985
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169738
  ensembl transcript: ENST00000585164
  gene symbol: DCXR
  hgvsc: ENST00000585164.2:n.16G>T
  variant of: http://identifiers.org/hgnc/18985
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22997
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13837
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2388
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29709
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9381
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

17-79995580-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79995580
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 79995580
    reference: chr 17
allele count: 3
allele frequency: 6.460783046905285e-5
allele num: 46434
alternate allele: G
canonical: true
consequence: 5' UTR
filter: PASS
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 72
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1134
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 537
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5019
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 32508
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2701
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 4.50181e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.218e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.439999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeDepth
all individuals: 213
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 294
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1116
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1919
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3760
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30848
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4256
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 271
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.105590062111801e-4
allele num: 6440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.67e0

MQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

DP
type: SiteQuality
SIO_000300: 4.34584e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.69e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.159e1

GenotypeDepth
all individuals: 213
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 959
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22857
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 520
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10282
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2693
bin: 9.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.62e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.557e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 4.13116e5

QD
type: SiteQuality
SIO_000300: 9.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

GenotypeQuality
all individuals: 202
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7418
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 280
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16627
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 6.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7390
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 8.333333333333333e-3
allele num: 120
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.63797e5

VQSLOD
type: SiteQuality
SIO_000300: -1.311e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 2.341e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.939999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.115e1

GenotypeQuality
all individuals: 195
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17728
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6697
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2421
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.704895861509332e-4
allele num: 7394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2676
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.76e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

VQSLOD
type: SiteQuality
SIO_000300: -2.196e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.66382e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

QD
type: SiteQuality
SIO_000300: 1.048e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6554
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2423
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.854368932038835e-3
allele num: 206
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 2.593e0

MQRankSum
type: SiteQuality
SIO_000300: 5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

VQSLOD
type: SiteQuality
SIO_000300: -1.091e0

QD
type: SiteQuality
SIO_000300: 6.62e0

DP
type: SiteQuality
SIO_000300: 2.67216e5

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 250
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 9.75e1
variant carriers: 15

GenotypeQuality
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GenotypeQuality
all individuals: 786
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

South Asian
type: Population
allele count: 16
allele frequency: 2.159244264507422e-3
allele num: 7410
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.868e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.550000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.289e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.488e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 2.72966e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 253
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 443
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.34661998384056e-4
allele num: 7426
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 1.43e0

InbreedingCoeff
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MQRankSum
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SIO_000300: -8.59e-1

ClippingRankSum
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QD
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VQSLOD
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BaseQRankSum
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FS
type: SiteQuality
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MQ
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SIO_000300: 5.907e1

DP
type: SiteQuality
SIO_000300: 2.79802e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

FS
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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MQRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: NaN
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 2784
num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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DP
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MQRankSum
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QD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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MQ
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DP
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QD
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GenotypeDepth
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 533

Latino
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allele frequency: 7.000000000000001e-2
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European (Non-Finnish)
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allele num: 2904
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African
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allele frequency: 5.408805031446541e-1
allele num: 318
num of homozygotes: 44

European (Finnish)
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East Asian
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allele frequency: 9.420289855072464e-2
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Other
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South Asian
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allele frequency: 2.657004830917874e-2
allele num: 7452
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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QD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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European (Non-Finnish)
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Latino
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African
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East Asian
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South Asian
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ClippingRankSum
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MQRankSum
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FS
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MQ
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QD
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BaseQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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African
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -8.19e-2

VQSLOD
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MQRankSum
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SIO_000300: -2.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

FS
type: SiteQuality
SIO_000300: 6.137e0

ReadPosRankSum
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SIO_000300: 7.23e-1

DP
type: SiteQuality
SIO_000300: 3.3792e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.45e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7482
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3054
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -7.779999999999999e-2

ClippingRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

QD
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SIO_000300: 2.77e0

BaseQRankSum
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SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 3.47e1

DP
type: SiteQuality
SIO_000300: 3.66484e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.229974160206718e-4
allele num: 3096
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.591e0

QD
type: SiteQuality
SIO_000300: 8.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.480000000000001e-2

ReadPosRankSum
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SIO_000300: 1.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

DP
type: SiteQuality
SIO_000300: 3.79503e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 2.666666666666667e-4
allele num: 7500
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.813953488372093e-3
allele num: 172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3102
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.42e-2

BaseQRankSum
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SIO_000300: -1.517e0

VQSLOD
type: SiteQuality
SIO_000300: -8.120000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.918e0

QD
type: SiteQuality
SIO_000300: 6.75e0

MQRankSum
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SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 3.82357e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7514
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3248
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -6.87e-2

ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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SIO_000300: 4.01217e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.356e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele count: 10
allele frequency: 1.330140994945464e-3
allele num: 7518
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
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FS
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VQSLOD
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

Latino
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African
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East Asian
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BaseQRankSum
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InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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allele count: 0
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African
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

DP
type: SiteQuality
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BaseQRankSum
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.328021248339973e-4
allele num: 7530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3302
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.908e-1

FS
type: SiteQuality
SIO_000300: 6.412e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

DP
type: SiteQuality
SIO_000300: 4.12936e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 1.147e1

GenotypeQuality
all individuals: 245
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3302
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.328021248339973e-4
allele num: 7530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

FS
type: SiteQuality
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QD
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-2

DP
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.908e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.019323671497584e-4
allele num: 3312
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.124e0

InbreedingCoeff
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SIO_000300: -6.64e-2

BaseQRankSum
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DP
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SIO_000300: 4.14807e5

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.115e0

QD
type: SiteQuality
SIO_000300: 3.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3662
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.333e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.12e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.31497e5

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.522e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 4.35105e5

QD
type: SiteQuality
SIO_000300: 3.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.05e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.103e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.633658151171978e-4
allele num: 7594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.87e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

QD
type: SiteQuality
SIO_000300: 1.316e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

DP
type: SiteQuality
SIO_000300: 4.43837e5

FS
type: SiteQuality
SIO_000300: 2.1161e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.855e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 369
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.296680497925311e-4
allele num: 7712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4494
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.82e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

DP
type: SiteQuality
SIO_000300: 4.61026e5

QD
type: SiteQuality
SIO_000300: 1.056e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 55
bin: 3.75e1
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GenotypeQuality
all individuals: 260
bin: 7.25e1
variant carriers: 6

African
type: Population
allele count: 98
allele frequency: 1.781818181818182e-1
allele num: 550
num of homozygotes: 7

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 1.388888888888889e-2
allele num: 432
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.296680497925311e-4
allele num: 7712
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 7.352941176470588e-3
allele num: 136
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.89e-2

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.452e1

DP
type: SiteQuality
SIO_000300: 4.62048e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
all individuals: 2756
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24902
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16783
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 8.885503935008886e-4
allele num: 7878
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.28e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.79e-1

DP
type: SiteQuality
SIO_000300: 4.88296e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.62e-1

FS
type: SiteQuality
SIO_000300: 2.939e0

QD
type: SiteQuality
SIO_000300: 1.409e1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
all individuals: 343
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2832
bin: 2.5e0
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GenotypeQuality
all individuals: 5641
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.820167455405897e-4
allele num: 5494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.44e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.632e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.722e0

DP
type: SiteQuality
SIO_000300: 4.92265e5

MQRankSum
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 8.390000000000001e0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 23478
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 17420
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 294
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.075334143377885e-4
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 3.826e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.03454e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.09e-2

GenotypeQuality
all individuals: 2570
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23013
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variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2615
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.878526194588371e-4
allele num: 6948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.95e-1

MQ
type: SiteQuality
SIO_000300: 5.722e1

VQSLOD
type: SiteQuality
SIO_000300: -1.059e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

DP
type: SiteQuality
SIO_000300: 5.11232e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.95e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.29e0

GenotypeQuality
all individuals: 531
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1445
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 397
bin: 7.75e1
variant carriers: 25

GenotypeQuality
all individuals: 281
bin: 7.25e1
variant carriers: 25

GenotypeQuality
all individuals: 2362
bin: 1.25e1
variant carriers: 29

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 29

GenotypeQuality
all individuals: 375
bin: 8.25e1
variant carriers: 33

GenotypeQuality
all individuals: 2082
bin: 1.75e1
variant carriers: 33

GenotypeQuality
all individuals: 21395
bin: 7.5e0
variant carriers: 24

GenotypeQuality
all individuals: 2846
bin: 9.75e1
variant carriers: 243

GenotypeQuality
all individuals: 803
bin: 2.75e1
variant carriers: 29

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 453
bin: 6.75e1
variant carriers: 21

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 24

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1089
bin: 6.25e1
variant carriers: 25

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 42

GenotypeQuality
all individuals: 282
bin: 8.75e1
variant carriers: 36

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 15

Other
type: Population
allele count: 1
allele frequency: 6.41025641025641e-3
allele num: 156
num of homozygotes: 0

African
type: Population
allele count: 230
allele frequency: 2.237354085603113e-1
allele num: 1028
num of homozygotes: 16

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.653927813163482e-4
allele num: 7536
num of homozygotes: 0

Latino
type: Population
allele count: 23
allele frequency: 2.304609218436874e-2
allele num: 998
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.488181139586962e-4
allele num: 8038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.266e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

DP
type: SiteQuality
SIO_000300: 5.27422e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 1135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 214
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variant carriers: 0

GenotypeQuality
all individuals: 20247
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GenotypeQuality
all individuals: 246
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GenotypeQuality
all individuals: 644
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GenotypeQuality
all individuals: 22610
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variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 2.5e0
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GenotypeQuality
all individuals: 439
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variant carriers: 0

GenotypeQuality
all individuals: 345
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GenotypeQuality
all individuals: 2262
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
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GenotypeQuality
all individuals: 258
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 297
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variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.220703125e-4
allele num: 8192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.42e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

DP
type: SiteQuality
SIO_000300: 5.43397e5

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.112e-1

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1337
bin: 2.5e0
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GenotypeQuality
all individuals: 2058
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variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 9.75e1
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GenotypeQuality
all individuals: 1118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
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GenotypeQuality
all individuals: 452
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GenotypeQuality
all individuals: 974
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variant carriers: 0

GenotypeQuality
all individuals: 14223
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GenotypeQuality
all individuals: 135
bin: 4.25e1
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GenotypeQuality
all individuals: 25538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
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GenotypeQuality
all individuals: 293
bin: 9.25e1
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GenotypeQuality
all individuals: 2002
bin: 6.25e1
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GenotypeQuality
all individuals: 2781
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.831e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.19e-2

DP
type: SiteQuality
SIO_000300: 6.1307e5

MQRankSum
type: SiteQuality
SIO_000300: -1.38e0

QD
type: SiteQuality
SIO_000300: 1.346e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.342e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
all individuals: 650
bin: 3.75e1
variant carriers: 177

GenotypeQuality
all individuals: 2621
bin: 2.5e0
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GenotypeQuality
all individuals: 23998
bin: 2.25e1
variant carriers: 385

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 112

GenotypeQuality
all individuals: 1364
bin: 3.25e1
variant carriers: 357

GenotypeQuality
all individuals: 1357
bin: 2.75e1
variant carriers: 280

GenotypeQuality
all individuals: 1861
bin: 1.75e1
variant carriers: 337

GenotypeQuality
all individuals: 621
bin: 7.25e1
variant carriers: 360

GenotypeQuality
all individuals: 358
bin: 8.25e1
variant carriers: 36

GenotypeQuality
all individuals: 375
bin: 7.75e1
variant carriers: 17

GenotypeQuality
all individuals: 8931
bin: 7.5e0
variant carriers: 180

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 120

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 130

GenotypeQuality
all individuals: 210
bin: 4.75e1
variant carriers: 73

GenotypeQuality
all individuals: 258
bin: 4.25e1
variant carriers: 119

GenotypeQuality
all individuals: 280
bin: 8.75e1
variant carriers: 51

GenotypeQuality
all individuals: 9274
bin: 9.75e1
variant carriers: 6941

GenotypeQuality
all individuals: 2469
bin: 6.25e1
variant carriers: 99

GenotypeQuality
all individuals: 700
bin: 6.75e1
variant carriers: 255

African
type: Population
allele count: 1761
allele frequency: 5.873915943962642e-1
allele num: 2998
num of homozygotes: 441

East Asian
type: Population
allele count: 293
allele frequency: 1.414092664092664e-1
allele num: 2072
num of homozygotes: 6

South Asian
type: Population
allele count: 269
allele frequency: 3.095512082853855e-2
allele num: 8690
num of homozygotes: 9

European (Non-Finnish)
type: Population
allele count: 3883
allele frequency: 2.243471227178183e-1
allele num: 17308
num of homozygotes: 239

Latino
type: Population
allele count: 350
allele frequency: 1.525719267654752e-1
allele num: 2294
num of homozygotes: 10

European (Finnish)
type: Population
allele count: 261
allele frequency: 3.206388206388207e-1
allele num: 814
num of homozygotes: 21

Other
type: Population
allele count: 41
allele frequency: 1.518518518518518e-1
allele num: 270
num of homozygotes: 2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.088e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.89e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 5.43e-1

QD
type: SiteQuality
SIO_000300: 2.173e1

DP
type: SiteQuality
SIO_000300: 6.74161e5

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 2759
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27597
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
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GenotypeQuality
all individuals: 1844
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 6.75e1
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GenotypeQuality
all individuals: 572
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3203
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.25e1
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GenotypeQuality
all individuals: 1438
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 2.5e0
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GenotypeQuality
all individuals: 9804
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GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.75e1
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GenotypeQuality
all individuals: 389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2426
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.416856492027335e-4
allele num: 8780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17848
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.011e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.32e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

DP
type: SiteQuality
SIO_000300: 6.64936e5

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

GenotypeQuality
all individuals: 3358
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1539
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1828
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.25e1
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GenotypeQuality
all individuals: 1408
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variant carriers: 0

GenotypeQuality
all individuals: 9598
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GenotypeQuality
all individuals: 461
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 2

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27813
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2306
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.546e0

VQSLOD
type: SiteQuality
SIO_000300: 2.55e-1

QD
type: SiteQuality
SIO_000300: 1.449e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.75e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.975e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.35e-2

DP
type: SiteQuality
SIO_000300: 6.70689e5

GenotypeQuality
all individuals: 391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 294
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8780
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2637
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2205
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28582
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8934
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.91793e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.18e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.18e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.105e1

GenotypeQuality
all individuals: 566
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1805
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29255
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7096
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1285
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2651
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 294
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7455
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 479
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 7.8506629448709e-4
allele num: 22928
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3420
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.25e0

QD
type: SiteQuality
SIO_000300: 1.099e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.76e-2

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.267e0

DP
type: SiteQuality
SIO_000300: 7.43896e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeDepth
all individuals: 46
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 673
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 857
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
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variant carriers: 0

GenotypeQuality
all individuals: 710
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variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 7040
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7944
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23204
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 9.174311926605505e-4
allele num: 3270
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.50248e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.065e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.72e-1

FS
type: SiteQuality
SIO_000300: 1.4976e1

QD
type: SiteQuality
SIO_000300: 1.574e1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.79e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.82e0

GenotypeQuality
all individuals: 27885
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3938
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.958175662218681e-5
allele num: 10042
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.84e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

DP
type: SiteQuality
SIO_000300: 8.14477e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

FS
type: SiteQuality
SIO_000300: 9.583e0

MQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.122e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1296
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

DP
type: SiteQuality
SIO_000300: 8.14477e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

MQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

FS
type: SiteQuality
SIO_000300: 9.583e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.84e-2

QD
type: SiteQuality
SIO_000300: 1.122e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5592
bin: 7.5e0
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GenotypeQuality
all individuals: 570
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 4.75e1
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GenotypeQuality
all individuals: 2640
bin: 9.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 11602
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27159
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.944444444444445e-4
allele num: 1440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28548
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.742e1

VQSLOD
type: SiteQuality
SIO_000300: -1.153e0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.083e0

FS
type: SiteQuality
SIO_000300: 3.645e0

QD
type: SiteQuality
SIO_000300: 1.429e1

DP
type: SiteQuality
SIO_000300: 8.31814e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.34e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

GenotypeQuality
all individuals: 1173
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5606
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1086
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28964
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.756e0

QD
type: SiteQuality
SIO_000300: 8.119999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.34e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

DP
type: SiteQuality
SIO_000300: 8.35976e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.067e0

VQSLOD
type: SiteQuality
SIO_000300: -1.908e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.866e1

GenotypeQuality
all individuals: 238
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 531
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5622
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 370
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.407155025553662e-5
allele num: 29350
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.595087315294569e-5
allele num: 10422
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.509e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.38e-2

QD
type: SiteQuality
SIO_000300: 1.632e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.921e-1

DP
type: SiteQuality
SIO_000300: 8.44867e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.94e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 607
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 568
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 795
bin: 5.25e1
variant carriers: 13

GenotypeQuality
all individuals: 904
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 311
bin: 5.75e1
variant carriers: 13

GenotypeQuality
all individuals: 506
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 270
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 1224
bin: 3.25e1
variant carriers: 5

GenotypeQuality
all individuals: 348
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 381
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1362
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 5518
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 27067
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 13091
bin: 6.25e1
variant carriers: 11

GenotypeQuality
all individuals: 3013
bin: 9.75e1
variant carriers: 393

GenotypeQuality
all individuals: 933
bin: 6.75e1
variant carriers: 12

GenotypeQuality
all individuals: 445
bin: 7.75e1
variant carriers: 12

GenotypeQuality
all individuals: 490
bin: 1.25e1
variant carriers: 7

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 16

African
type: Population
allele count: 448
allele frequency: 1.181434599156118e-1
allele num: 3792
num of homozygotes: 22

Latino
type: Population
allele count: 22
allele frequency: 4.526748971193415e-3
allele num: 4860
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.870813397129187e-4
allele num: 10450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.014130214319519e-4
allele num: 29582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4368
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.727e0

VQSLOD
type: SiteQuality
SIO_000300: 4.07e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.58e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 8.4999e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.372e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 356
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1206
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27365
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13082
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 5.55247084952804e-4
allele num: 3602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.48731e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 8.5e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: -4.984e-1

FS
type: SiteQuality
SIO_000300: 7.898e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.23e-1

GenotypeQuality
all individuals: 1316
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 13479
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 342
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5620
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 472
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 255
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 447
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 525
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27365
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1161
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 373
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 667
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 354
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 928
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2759
bin: 9.75e1
variant carriers: 127

GenotypeQuality
all individuals: 434
bin: 7.75e1
variant carriers: 1

African
type: Population
allele count: 125
allele frequency: 3.443526170798898e-2
allele num: 3630
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.247191011235955e-4
allele num: 4450
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.505703422053231e-5
allele num: 10520
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 2.025111381125962e-3
allele num: 4938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.671681711802073e-4
allele num: 29910
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.52938e5

FS
type: SiteQuality
SIO_000300: 5.22e-1

QD
type: SiteQuality
SIO_000300: 1.312e1

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27611
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13335
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5684
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 929
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.327122704285334e-5
allele num: 30056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.555e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.51025e5

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.35e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.878e-1

GenotypeQuality
all individuals: 425
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5711
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13633
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27673
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 560
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4996
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.637461834594451e-5
allele num: 30132
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.38e-2

FS
type: SiteQuality
SIO_000300: 1.0271e1

QD
type: SiteQuality
SIO_000300: 6.32e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

DP
type: SiteQuality
SIO_000300: 8.53041e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.14e-1

GenotypeQuality
all individuals: 1080
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.307534563736191e-5
allele num: 30234
num of homozygotes: 0

African
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allele count: 2
allele frequency: 5.494505494505495e-4
allele num: 3640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e-1

QD
type: SiteQuality
SIO_000300: 1.058e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.42e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.54388e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

FS
type: SiteQuality
SIO_000300: 7.54e0

GenotypeQuality
all individuals: 1227
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 487
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variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4548
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.735229759299781e-4
allele num: 3656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30374
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.745e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

QD
type: SiteQuality
SIO_000300: 4.1e0

DP
type: SiteQuality
SIO_000300: 8.53385e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.769e0

GenotypeQuality
all individuals: 349
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2641
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 381
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.878287002253945e-4
allele num: 10648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.44e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.31e-1

DP
type: SiteQuality
SIO_000300: 8.53341e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.977e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 8.080000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e-2

QD
type: SiteQuality
SIO_000300: 1.135e1

GenotypeQuality
all individuals: 247
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
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variant carriers: 0

GenotypeQuality
all individuals: 912
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 237
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GenotypeQuality
all individuals: 28413
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.298805832288711e-5
allele num: 30314
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.379103357719002e-5
allele num: 10662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1546
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.39e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.654e0

DP
type: SiteQuality
SIO_000300: 8.51611e5

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

FS
type: SiteQuality
SIO_000300: 1.169e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.51e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 32

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10658
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.756339581036384e-4
allele num: 3628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 35
allele frequency: 1.155344292599195e-3
allele num: 30294
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.38e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.72e-1

DP
type: SiteQuality
SIO_000300: 8.46155e5

FS
type: SiteQuality
SIO_000300: 4.288e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

QD
type: SiteQuality
SIO_000300: 7.41e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.373136342170951e-5
allele num: 29646
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10580
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.126e1

MQRankSum
type: SiteQuality
SIO_000300: 3.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.48e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.763e1

VQSLOD
type: SiteQuality
SIO_000300: -2.079e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.681e0

DP
type: SiteQuality
SIO_000300: 8.23759e5

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.715148188803513e-4
allele num: 29152
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10520
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.04242e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.209e-1

QD
type: SiteQuality
SIO_000300: 7.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 4.822e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.54e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10370
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GenotypeQuality
all individuals: 216
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1472
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4796
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.505703422053231e-5
allele num: 10520
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.113e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 1.2923e1

DP
type: SiteQuality
SIO_000300: 8.0419e5

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 1.02e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10520
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1472
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.085070892410342e-4
allele num: 4796
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 1.2923e1

QD
type: SiteQuality
SIO_000300: 1.02e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.113e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.24e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

DP
type: SiteQuality
SIO_000300: 8.0419e5

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3386
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.574875526618154e-5
allele num: 10444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1444
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.62e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 3.807e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

QD
type: SiteQuality
SIO_000300: 1.09e1

VQSLOD
type: SiteQuality
SIO_000300: -2.551e-1

DP
type: SiteQuality
SIO_000300: 7.90061e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.437e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 3.595311713525563e-5
allele num: 27814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3234
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.116e1

FS
type: SiteQuality
SIO_000300: 1.3624e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: -3.053e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.487e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.469e0

DP
type: SiteQuality
SIO_000300: 7.55942e5

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 285
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variant carriers: 0

GenotypeQuality
all individuals: 235
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.814750290360046e-4
allele num: 27552
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.67379679144385e-3
allele num: 374
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.937233630375823e-4
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.454590083456063e-4
allele num: 4074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1344
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.222e-1

DP
type: SiteQuality
SIO_000300: 7.57143e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

QD
type: SiteQuality
SIO_000300: 6.61e0

FS
type: SiteQuality
SIO_000300: 5.444e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.92e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4472
num of homozygotes: 0

African
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allele count: 1
allele frequency: 3.117206982543641e-4
allele num: 3208
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27772
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.47041e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

QD
type: SiteQuality
SIO_000300: 1.106e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.798e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4084
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African
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allele count: 1
allele frequency: 3.152585119798235e-4
allele num: 3172
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-1

DP
type: SiteQuality
SIO_000300: 7.41039e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 1.51e0

ReadPosRankSum
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SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.84e-2

QD
type: SiteQuality
SIO_000300: 1.249e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3930
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.508750754375377e-4
allele num: 26512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1230
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BaseQRankSum
type: SiteQuality
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MQ
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
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DP
type: SiteQuality
SIO_000300: 7.15197e5

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.07e-2

QD
type: SiteQuality
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