X-70812446-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812446
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812446
    reference: chr 0
allele count: 2
allele frequency: 2.998186097411066e-5
allele num: 66707
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+26T>C
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+26T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 5.208604614823689e-5
  allele num: 38398
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

X-70812447-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812447
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812447
    reference: chr 0
allele count: 3
allele frequency: 5.802932415180471e-5
allele num: 51698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+27A>C
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+27A>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele num: 383
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population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-70812447-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812447
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812447
    reference: chr 0
allele count: 24854
allele frequency: 4.807536074896515e-1
allele num: 51698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+27A>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+27A>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 25
population: Latino
  type: Population
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  num of homozygotes: 6
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
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site quality: MQRankSum

X-70812448-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812448
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812448
    reference: chr 0
allele count: 3
allele frequency: 5.201289919900135e-5
allele num: 57678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+28C>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+28C>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Finnish)
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population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
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site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
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X-70812448-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812448
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812447
    reference: chr 0
allele count: 14962
allele frequency: 2.594056659384861e-1
allele num: 57678
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
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  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+43delT
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+43delT
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 1360
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 8383
  allele frequency: 2.527740923893378e-1
  allele num: 33164
  num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: CT
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

X-70812448-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812448
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812446
    reference: chr 0
allele count: 55
allele frequency: 9.535698186483581e-4
allele num: 57678
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+42_140+43delTT
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+42_140+43delTT
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 4
  allele frequency: 8.684324793747286e-4
  allele num: 4606
  num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: CTT
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

X-70812449-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812449
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812449
    reference: chr 0
allele count: 3
allele frequency: 3.637686431429611e-4
allele num: 8247
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+29T>C
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+29T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Finnish)
  type: Population
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  allele num: 625
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population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
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site quality: ReadPosRankSum
site quality: MQ
site quality: FS
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site quality: InbreedingCoeff
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X-70812451-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812451
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812451
    reference: chr 0
allele count: 1
allele frequency: 1.413847219669443e-5
allele num: 70729
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+31T>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+31T>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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num of homozygotes: 0
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  allele num: 39652
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population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
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site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
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X-70812463-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812463
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812463
    reference: chr 0
allele count: 1
allele frequency: 1.296377920091265e-5
allele num: 77138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+43T>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+43T>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele num: 583
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population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: VQSLOD
site quality: DP
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X-70812463-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812463
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812462
    reference: chr 0
allele count: 5
allele frequency: 6.481889600456324e-5
allele num: 77138
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+46delA
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+46delA
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
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population: East Asian
population: Other
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population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: TA
site quality: ReadPosRankSum
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site quality: ClippingRankSum
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X-70812464-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812464
    reference: chr 0
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    type: ExactPosition
    position: 24070812464
    reference: chr 0
allele count: 33
allele frequency: 4.227625611724615e-4
allele num: 78058
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
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  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+44A>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+44A>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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population: Other
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population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
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site quality: MQ
site quality: FS
site quality: InbreedingCoeff
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site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
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X-70812466-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812466
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812465
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allele count: 0
allele frequency: 0.0e0
allele num: 76881
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
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  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+48delT
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+48delT
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
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population: South Asian
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population: European (Non-Finnish)
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site quality: MQ
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X-70812468-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812468
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812468
    reference: chr 0
allele count: 1
allele frequency: 1.318704504694588e-5
allele num: 75832
alternate allele: C
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
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  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+48T>C
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+48T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele frequency: 0.0e0
  allele num: 574
  num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
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site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
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site quality: InbreedingCoeff
site quality: MQ

X-70812468-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812468
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812468
    reference: chr 0
allele count: 1
allele frequency: 1.318704504694588e-5
allele num: 75832
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+48T>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+48T>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 8400
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
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site quality: QD
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X-70812470-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812470
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812471
    reference: chr 0
allele count: 1
allele frequency: 1.36093305570299e-5
allele num: 73479
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+56dupG
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+56dupG
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
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  allele num: 8175
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population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
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site quality: VQSLOD
site quality: QD
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X-70812470-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812470
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812470
    reference: chr 0
allele count: 1
allele frequency: 1.36093305570299e-5
allele num: 73479
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+50A>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+50A>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
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population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
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population: South Asian
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site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
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X-70812470-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812470
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070812469
    reference: chr 0
allele count: 4
allele frequency: 5.44373222281196e-5
allele num: 73479
alternate allele: A
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+56delG
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.140+56delG
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
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num of homozygotes: 0
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population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: AG
site quality: ClippingRankSum
site quality: VQSLOD
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site quality: FS
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site quality: BaseQRankSum
site quality: QD
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X-70812471-G-A
type: Variant
location: Region
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alternate allele: A
annotation: Annotation
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  consequence: intron_variant
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
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genotype depth: GenotypeDepth
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num of homozygotes: 0
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population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
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X-70812472-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070812472
    reference: chr 0
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    type: ExactPosition
    position: 24070812472
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allele count: 8
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allele num: 72632
alternate allele: A
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
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  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.140+52G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
population: African
population: European (Non-Finnish)
population: Other
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population: Latino
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X-70814134-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814134
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allele count: 0
allele frequency: 0.0e0
allele num: 60404
alternate allele: A
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
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  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-47G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
population: African
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population: East Asian
population: Latino
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site quality: MQRankSum
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site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
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X-70814136-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814136
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814136
    reference: chr 0
allele count: 16786
allele frequency: 2.75401552066414e-1
allele num: 60951
alternate allele: T
annotation: Annotation
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  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-45C>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-45C>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Non-Finnish)
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population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
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site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
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site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
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X-70814139-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814139
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814139
    reference: chr 0
allele count: 2
allele frequency: 3.180560414745078e-5
allele num: 62882
alternate allele: T
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000362799
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  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-42C>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-42C>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele num: 472
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population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
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site quality: DP
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X-70814140-G-A
type: Variant
location: Region
  begin: Position
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    position: 24070814140
    reference: chr 0
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    type: ExactPosition
    position: 24070814140
    reference: chr 0
allele count: 5
allele frequency: 7.927196626185117e-5
allele num: 63074
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-41G>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-41G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
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population: European (Non-Finnish)
population: South Asian
population: Other
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population: African
population: European (Finnish)
reference allele: G
site quality: DP
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X-70814149-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814149
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814149
    reference: chr 0
allele count: 3
allele frequency: 4.632417658776115e-5
allele num: 64761
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-32C>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-32C>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
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site quality: FS
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site quality: QD
site quality: VQSLOD
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X-70814157-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814157
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814157
    reference: chr 0
allele count: 3
allele frequency: 4.44372028262061e-5
allele num: 67511
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-24A>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-24A>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
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population: South Asian
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population: Other
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X-70814161-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814161
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814161
    reference: chr 0
allele count: 2
allele frequency: 2.882301229301474e-5
allele num: 69389
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-20T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8074
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

X-70814167-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814167
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814167
    reference: chr 0
allele count: 1
allele frequency: 1.38192170031646e-5
allele num: 72363
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-14T>C
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-14T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
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  allele num: 6782
  num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
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site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
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site quality: ReadPosRankSum

X-70814168-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814168
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814168
    reference: chr 0
allele count: 1
allele frequency: 1.372721282670767e-5
allele num: 72848
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-13T>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-13T>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele num: 39316
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population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD

X-70814171-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814171
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814171
    reference: chr 0
allele count: 2
allele frequency: 2.681863895407308e-5
allele num: 74575
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.141-10A>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.141-10A>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
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  variant carriers: 1
genotype depth: GenotypeDepth
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population: Other
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population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
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site quality: BaseQRankSum
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X-70814183-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814183
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814183
    reference: chr 0
allele count: 49
allele frequency: 6.062555676531723e-4
allele num: 80824
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.143G>A
  hgvsp: ENSP00000362799.1:p.Cys48Tyr
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
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  hgvsp: ENSP00000362800.3:p.Cys48Tyr
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys48Tyr
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

X-70814192-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814192
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814192
    reference: chr 0
allele count: 1
allele frequency: 1.202082006034452e-5
allele num: 83189
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.152A>T
  hgvsp: ENSP00000362800.3:p.Asn51Ile
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.152A>T
  hgvsp: ENSP00000362799.1:p.Asn51Ile
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 29
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1001
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4689
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42819
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn51Ile
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4382
  num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

X-70814196-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814196
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814196
    reference: chr 0
allele count: 2
allele frequency: 2.388487490296769e-5
allele num: 83735
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.156C>T
  hgvsp: ENST00000373695.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.156C>T
  hgvsp: ENST00000373696.3:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41165
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 198
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 43335
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val52Val
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9107
  num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-70814199-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814199
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814199
    reference: chr 0
allele count: 71
allele frequency: 8.442832510850823e-4
allele num: 84095
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.159G>A
  hgvsp: ENST00000373695.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.159G>A
  hgvsp: ENST00000373696.3:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 201
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 94
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  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 147
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 43590
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Gln53Gln
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 4.354262823304015e-5
  allele num: 45932
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

X-70814204-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814204
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814204
    reference: chr 0
allele count: 1
allele frequency: 1.183684098387822e-5
allele num: 84482
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.164G>A
  hgvsp: ENSP00000362799.1:p.Arg55Lys
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.164G>A
  hgvsp: ENSP00000362800.3:p.Arg55Lys
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 257
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  variant carriers: 0
hgvs: p.Arg55Lys
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 605
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

X-70814205-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814205
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814205
    reference: chr 0
allele count: 4
allele frequency: 4.731376120744719e-5
allele num: 84542
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.165G>C
  hgvsp: ENSP00000362799.1:p.Arg55Ser
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.165G>C
  hgvsp: ENSP00000362800.3:p.Arg55Ser
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg55Ser
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8432
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS

X-70814210-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814210
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814210
    reference: chr 0
allele count: 4
allele frequency: 4.728188276457168e-5
allele num: 84599
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.170G>A
  hgvsp: ENSP00000362799.1:p.Gly57Asp
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.170G>A
  hgvsp: ENSP00000362800.3:p.Gly57Asp
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly57Asp
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 3
  allele frequency: 3.273679615888258e-4
  allele num: 9164
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

X-70814216-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814216
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814216
    reference: chr 0
allele count: 1
allele frequency: 1.181739757270654e-5
allele num: 84621
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.176C>G
  hgvsp: ENSP00000362799.1:p.Thr59Ser
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.176C>G
  hgvsp: ENSP00000362800.3:p.Thr59Ser
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr59Ser
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8435
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

X-70814241-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814241
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814241
    reference: chr 0
allele count: 1
allele frequency: 1.199040767386091e-5
allele num: 83400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.187+14A>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.187+14A>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4390
  num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

X-70814254-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814254
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814254
    reference: chr 0
allele count: 5
allele frequency: 6.051144271381718e-5
allele num: 82629
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.187+27A>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.187+27A>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
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population: European (Finnish)
population: East Asian
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X-70814267-T-C
type: Variant
location: Region
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allele count: 1
allele frequency: 1.233486696845974e-5
allele num: 81071
alternate allele: C
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000147174
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: African
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population: European (Non-Finnish)
population: East Asian
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X-70814549-T-G
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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    type: ExactPosition
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allele count: 1
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allele num: 62608
alternate allele: G
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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X-70814553-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814553
    reference: chr 0
  end: Position
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allele count: 1
allele frequency: 1.598414372942042e-5
allele num: 62562
alternate allele: C
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.188-43T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
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genotype depth: GenotypeDepth
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X-70814558-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
canonical: true
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 461
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
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site quality: BaseQRankSum
site quality: ClippingRankSum
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site quality: QD
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site quality: DP

X-70814562-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814562
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814562
    reference: chr 0
allele count: 2
allele frequency: 3.206618460502477e-5
allele num: 62371
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.188-34A>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.188-34A>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
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  allele num: 4943
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population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
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site quality: QD
site quality: InbreedingCoeff
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X-70814576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814576
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814576
    reference: chr 0
allele count: 1
allele frequency: 1.621796951021732e-5
allele num: 61660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.188-20G>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.188-20G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
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population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
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site quality: BaseQRankSum

X-70814578-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814578
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814578
    reference: chr 0
allele count: 3
allele frequency: 4.873452678774489e-5
allele num: 61558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.188-18C>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.188-18C>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Other
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population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
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site quality: InbreedingCoeff
site quality: QD
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site quality: DP

X-70814583-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814583
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814583
    reference: chr 0
allele count: 1
allele frequency: 1.629965281739499e-5
allele num: 61351
alternate allele: C
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.188-13T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6977
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

X-70814590-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814590
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814590
    reference: chr 0
allele count: 3
allele frequency: 4.92667465882778e-5
allele num: 60893
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.188-6A>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.188-6A>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 850
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  variant carriers: 0
hgvs: c.188-6A>G
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3308
  num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

X-70814605-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814605
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814605
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 59213
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.197G>A
  hgvsp: ENSP00000362800.3:p.Arg66Lys
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.197G>A
  hgvsp: ENSP00000362799.1:p.Arg66Lys
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg66Lys
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4812
  num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

X-70814610-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814610
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814610
    reference: chr 0
allele count: 1
allele frequency: 1.679289324757762e-5
allele num: 59549
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.202G>C
  hgvsp: ENSP00000362800.3:p.Ala68Pro
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.202G>C
  hgvsp: ENSP00000362799.1:p.Ala68Pro
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala68Pro
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 455
  num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

X-70814614-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814614
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814614
    reference: chr 0
allele count: 1
allele frequency: 1.684380737421887e-5
allele num: 59369
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.206C>T
  hgvsp: ENSP00000362800.3:p.Pro69Leu
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.206C>T
  hgvsp: ENSP00000362799.1:p.Pro69Leu
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Pro69Leu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 452
  num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

X-70814625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814625
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814625
    reference: chr 0
allele count: 25
allele frequency: 4.262792640714785e-4
allele num: 58647
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
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  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.217G>A
  hgvsp: ENSP00000362799.1:p.Ala73Thr
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.217G>A
  hgvsp: ENSP00000362800.3:p.Ala73Thr
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala73Thr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 20
  allele frequency: 6.664889362836577e-4
  allele num: 30008
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

X-70814631-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814631
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814631
    reference: chr 0
allele count: 5
allele frequency: 8.81321276858266e-5
allele num: 56733
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+2T>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+2T>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.221+2T>G
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4551
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

X-70814640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814640
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814640
    reference: chr 0
allele count: 1
allele frequency: 1.716649786277102e-5
allele num: 58253
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+11G>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+11G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6409
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

X-70814646-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814646
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814646
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 61560
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+17A>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+17A>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3277
  num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

X-70814647-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814647
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814647
    reference: chr 0
allele count: 11
allele frequency: 1.798472932982359e-4
allele num: 61163
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+18T>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+18T>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
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  allele num: 6872
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population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
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site quality: BaseQRankSum
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site quality: DP
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X-70814648-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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    position: 24070814648
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allele count: 4
allele frequency: 6.493928177154361e-5
allele num: 61596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+19G>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
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  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+19G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
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population: South Asian
population: Latino
population: European (Finnish)
population: Other
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population: European (Non-Finnish)
reference allele: G
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site quality: MQRankSum
site quality: ReadPosRankSum
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X-70814648-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814648
    reference: chr 0
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    type: ExactPosition
    position: 24070814648
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allele count: 1
allele frequency: 1.62348204428859e-5
allele num: 61596
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  ensembl protein: ENSP00000362800
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+19G>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: Other
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population: East Asian
population: Latino
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population: European (Finnish)
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site quality: ClippingRankSum
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site quality: QD
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X-70814648-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814648
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814648
    reference: chr 0
allele count: 3
allele frequency: 4.87044613286577e-5
allele num: 61596
alternate allele: T
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+19G>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+19G>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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population: European (Non-Finnish)
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X-70814656-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814656
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814656
    reference: chr 0
allele count: 4
allele frequency: 7.509198768491402e-5
allele num: 53268
alternate allele: C
annotation: Annotation
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  ensembl protein: ENSP00000362799
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+27A>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 381
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

X-70814656-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814656
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814656
    reference: chr 0
allele count: 31980
allele frequency: 6.003604415408876e-1
allele num: 53268
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+27A>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+27A>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 286
population: South Asian
  type: Population
  allele count: 3467
  allele frequency: 7.097236438075742e-1
  allele num: 4885
  num of homozygotes: 26
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

X-70814657-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814657
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814657
    reference: chr 0
allele count: 4
allele frequency: 7.183521002819532e-5
allele num: 55683
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+28C>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+28C>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele count: 0
  allele frequency: 0.0e0
  allele num: 397
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

X-70814657-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814657
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814658
    reference: chr 0
allele count: 11049
allele frequency: 1.984268089003825e-1
allele num: 55683
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+44dupT
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+44dupT
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 6436
  num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

X-70814657-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814657
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814659
    reference: chr 0
allele count: 13
allele frequency: 2.334644325916348e-4
allele num: 55683
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+43_221+44dupTT
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+43_221+44dupTT
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
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  allele num: 4271
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population: Other
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population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
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site quality: QD
site quality: FS
site quality: InbreedingCoeff
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site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
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X-70814667-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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    type: ExactPosition
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    reference: chr 0
allele count: 1
allele frequency: 1.189357627945147e-5
allele num: 84079
alternate allele: C
annotation: Annotation
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  consequence: intron_variant
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  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+38T>C
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+38T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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population: South Asian
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population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: T
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site quality: FS
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X-70814673-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814673
    reference: chr 0
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    type: ExactPosition
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allele count: 0
allele frequency: 0.0e0
allele num: 83227
alternate allele: A
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+44T>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
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site quality: InbreedingCoeff
site quality: MQRankSum
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site quality: VQSLOD
site quality: MQ
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X-70814674-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814674
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814674
    reference: chr 0
allele count: 7
allele frequency: 8.759087553336587e-5
allele num: 79917
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+45A>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+45A>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: East Asian
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population: Other
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site quality: InbreedingCoeff
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X-70814676-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814676
    reference: chr 0
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allele count: 2
allele frequency: 2.433030826500572e-5
allele num: 82202
alternate allele: AT
annotation: Annotation
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
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  gene symbol: ACRC
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  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
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X-70814678-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814678
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814678
    reference: chr 0
allele count: 1
allele frequency: 1.229966913890016e-5
allele num: 81303
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+49T>C
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+49T>C
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 43169
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

X-70814678-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814678
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814678
    reference: chr 0
allele count: 1
allele frequency: 1.229966913890016e-5
allele num: 81303
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+49T>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+49T>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 608
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

X-70814680-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814680
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814681
    reference: chr 0
allele count: 7
allele frequency: 8.752406911900773e-5
allele num: 79978
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+57dupG
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+57dupG
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7753
  num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-70814680-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814680
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814679
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 79978
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+57delG
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+57delG
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 8865
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9193
  num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: AG
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS

X-70814681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070814681
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070814681
    reference: chr 0
allele count: 2
allele frequency: 2.503692947096968e-5
allele num: 79882
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.221+52G>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.221+52G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.379083101372731e-5
  allele num: 42033
  num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
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site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
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site quality: FS
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X-70817756-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070817756
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070817756
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 66701
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.222-44G>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.222-44G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
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  allele num: 6700
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population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
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X-70817757-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070817757
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070817757
    reference: chr 0
allele count: 54
allele frequency: 8.116517112323579e-4
allele num: 66531
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.222-43C>T
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.222-43C>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: InbreedingCoeff
site quality: MQRankSum
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site quality: FS
site quality: QD
site quality: MQ

X-70817758-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070817758
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070817758
    reference: chr 0
allele count: 3
allele frequency: 4.492564805247316e-5
allele num: 66777
alternate allele: A
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
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  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.222-42G>A
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.222-42G>A
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Finnish)
  type: Population
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population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
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site quality: FS
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site quality: MQ
site quality: QD

X-70817762-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070817762
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070817762
    reference: chr 0
allele count: 2
allele frequency: 2.962743500481446e-5
allele num: 67505
alternate allele: G
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.222-38A>G
  variant of: http://identifiers.org/hgnc/15805
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362800
  ensembl transcript: ENST00000373696
  gene symbol: ACRC
  hgvsc: ENST00000373696.3:c.222-38A>G
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 447
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16219
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3773
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3598
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

X-70817765-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24070817765
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24070817765
    reference: chr 0
allele count: 1
allele frequency: 1.475753372096455e-5
allele num: 67762
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147174
  ensembl protein: ENSP00000362799
  ensembl transcript: ENST00000373695
  gene symbol: ACRC
  hgvsc: ENST00000373695.1:c.222-35C>T
  variant of: http://identifiers.org/hgnc/15805
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: C

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 511
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7293
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7075
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.573e0

FS
type: SiteQuality
SIO_000300: 1.5296e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

MQ
type: SiteQuality
SIO_000300: 3.635e1

DP
type: SiteQuality
SIO_000300: 1.279546e6

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

QD
type: SiteQuality
SIO_000300: 2.72e0

East Asian
type: Population
allele count: 2
allele frequency: 5.428881650380022e-4
allele num: 3684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29941
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4001
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.195909236177693e-4
allele num: 3129
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 9.4402e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.001e0

VQSLOD
type: SiteQuality
SIO_000300: 7.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e0

QD
type: SiteQuality
SIO_000300: 3.13e0

DP
type: SiteQuality
SIO_000300: 1.893926e6

MQ
type: SiteQuality
SIO_000300: 3.577e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.979e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.278e0

South Asian
type: Population
allele count: 2203
allele frequency: 5.506123469132717e-1
allele num: 4001
num of homozygotes: 0

East Asian
type: Population
allele count: 1918
allele frequency: 5.206297502714441e-1
allele num: 3684
num of homozygotes: 4

African
type: Population
allele count: 2010
allele frequency: 4.914425427872861e-1
allele num: 4090
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 1745
allele frequency: 5.576861617130073e-1
allele num: 3129
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 13358
allele frequency: 4.461440833639491e-1
allele num: 29941
num of homozygotes: 11

Other
type: Population
allele count: 199
allele frequency: 5.195822454308094e-1
allele num: 383
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.278e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 9.4402e1

QD
type: SiteQuality
SIO_000300: 3.13e0

DP
type: SiteQuality
SIO_000300: 1.893926e6

MQ
type: SiteQuality
SIO_000300: 3.577e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.979e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.001e0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33164
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 8.382229673093043e-4
allele num: 3579
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6285
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.556e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.65e-1

DP
type: SiteQuality
SIO_000300: 1.963279e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.625e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

QD
type: SiteQuality
SIO_000300: 2.17e0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-1

Latino
type: Population
allele count: 2298
allele frequency: 3.656324582338902e-1
allele num: 6285
num of homozygotes: 0

East Asian
type: Population
allele count: 1072
allele frequency: 2.995250069851914e-1
allele num: 3579
num of homozygotes: 0

African
type: Population
allele count: 1308
allele frequency: 2.839774207555363e-1
allele num: 4606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 471
allele frequency: 1.630886426592798e-1
allele num: 2888
num of homozygotes: 0

Other
type: Population
allele count: 104
allele frequency: 2.331838565022422e-1
allele num: 446
num of homozygotes: 0

South Asian
type: Population
allele count: 1326
allele frequency: 1.976154992548435e-1
allele num: 6710
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.625e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

DP
type: SiteQuality
SIO_000300: 1.963279e6

MQ
type: SiteQuality
SIO_000300: 3.556e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

QD
type: SiteQuality
SIO_000300: 2.17e0

Latino
type: Population
allele count: 7
allele frequency: 1.11376292760541e-3
allele num: 6285
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 6.925207756232687e-4
allele num: 2888
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 1.117630623079072e-3
allele num: 3579
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 9.649017006392474e-4
allele num: 33164
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 8.941877794336811e-4
allele num: 6710
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.17e0

DP
type: SiteQuality
SIO_000300: 1.963279e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.625e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-1

MQ
type: SiteQuality
SIO_000300: 3.556e1

VQSLOD
type: SiteQuality
SIO_000300: 7.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 69
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1085
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.071645415907711e-4
allele num: 4941
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 463
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e-1

QD
type: SiteQuality
SIO_000300: 4.79e0

DP
type: SiteQuality
SIO_000300: 4.16973e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e-1

MQ
type: SiteQuality
SIO_000300: 3.568e1

FS
type: SiteQuality
SIO_000300: 1.2408e1

MQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 539
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6325
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4939
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.812773e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.74e-2

FS
type: SiteQuality
SIO_000300: 2.534e0

MQ
type: SiteQuality
SIO_000300: 3.597e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: -3.508e0

QD
type: SiteQuality
SIO_000300: 2.461e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.019e0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.311924908678966e-5
allele num: 43254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5351
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8485
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4225
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.399e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

MQ
type: SiteQuality
SIO_000300: 3.575e1

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.98e-1

DP
type: SiteQuality
SIO_000300: 1.669449e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

QD
type: SiteQuality
SIO_000300: 1.34e0

East Asian
type: Population
allele count: 4
allele frequency: 7.475238273219959e-4
allele num: 5351
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 583
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4225
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.178550383028874e-4
allele num: 8485
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43254
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

QD
type: SiteQuality
SIO_000300: 1.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

DP
type: SiteQuality
SIO_000300: 1.669449e6

VQSLOD
type: SiteQuality
SIO_000300: 3.98e-1

FS
type: SiteQuality
SIO_000300: 1.399e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

MQ
type: SiteQuality
SIO_000300: 3.575e1

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 589
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4258
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.167269756040621e-4
allele num: 8567
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 2.279358132749818e-4
allele num: 43872
num of homozygotes: 0

East Asian
type: Population
allele count: 21
allele frequency: 3.904071388733965e-3
allele num: 5379
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8693
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.584e1

FS
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.93e-1

DP
type: SiteQuality
SIO_000300: 1.640864e6

VQSLOD
type: SiteQuality
SIO_000300: -3.239e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

QD
type: SiteQuality
SIO_000300: 3.52e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6593
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4211
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43165
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.87e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.437e0

QD
type: SiteQuality
SIO_000300: 3.481e1

DP
type: SiteQuality
SIO_000300: 1.604021e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.54e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.941370607649e-4
allele num: 5151
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8445
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42602
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.544e0

MQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

QD
type: SiteQuality
SIO_000300: 4.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

DP
type: SiteQuality
SIO_000300: 1.576613e6

VQSLOD
type: SiteQuality
SIO_000300: -3.504e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

MQ
type: SiteQuality
SIO_000300: 3.564e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5151
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.544163063619518e-4
allele num: 6476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8445
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

DP
type: SiteQuality
SIO_000300: 1.576613e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

MQ
type: SiteQuality
SIO_000300: 3.564e1

QD
type: SiteQuality
SIO_000300: 4.36e0

MQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

FS
type: SiteQuality
SIO_000300: 6.544e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.504e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4079
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.226391954868776e-4
allele num: 8154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4890
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

FS
type: SiteQuality
SIO_000300: 1.1519e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.14e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.24e-2

QD
type: SiteQuality
SIO_000300: 6.37e0

MQ
type: SiteQuality
SIO_000300: 3.724e1

DP
type: SiteQuality
SIO_000300: 1.552251e6

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4890
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4079
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.415692337423906e-5
allele num: 41396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
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South Asian
type: Population
allele count: 0
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allele num: 8154
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DP
type: SiteQuality
SIO_000300: 1.552251e6

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.24e-2

QD
type: SiteQuality
SIO_000300: 6.37e0

MQ
type: SiteQuality
SIO_000300: 3.724e1

FS
type: SiteQuality
SIO_000300: 1.1519e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.14e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4079
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.662769349695623e-5
allele num: 41396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.24e-2

DP
type: SiteQuality
SIO_000300: 1.552251e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.14e-2

FS
type: SiteQuality
SIO_000300: 1.1519e1

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

QD
type: SiteQuality
SIO_000300: 6.37e0

MQ
type: SiteQuality
SIO_000300: 3.724e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

South Asian
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allele count: 1
allele frequency: 1.227897838899803e-4
allele num: 8144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4077
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6213
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4878
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8167
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.435e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

DP
type: SiteQuality
SIO_000300: 1.551888e6

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.072e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

QD
type: SiteQuality
SIO_000300: 5.54e0

MQ
type: SiteQuality
SIO_000300: 3.642e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 559
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4788
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 9.866798223976321e-4
allele num: 8108
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.512e0

QD
type: SiteQuality
SIO_000300: 3.52e0

DP
type: SiteQuality
SIO_000300: 1.550392e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.401e0

MQ
type: SiteQuality
SIO_000300: 3.51e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.371e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7079
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.005e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 4.482e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.467664e6

QD
type: SiteQuality
SIO_000300: 7.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

African
type: Population
allele count: 3723
allele frequency: 5.038570848558668e-1
allele num: 7389
num of homozygotes: 762

European (Finnish)
type: Population
allele count: 408
allele frequency: 1.234866828087167e-1
allele num: 3304
num of homozygotes: 22

Latino
type: Population
allele count: 3792
allele frequency: 5.290916701548766e-1
allele num: 7167
num of homozygotes: 865

South Asian
type: Population
allele count: 2163
allele frequency: 4.061209162598573e-1
allele num: 5326
num of homozygotes: 258

Other
type: Population
allele count: 119
allele frequency: 2.626931567328918e-1
allele num: 453
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East Asian
type: Population
allele count: 2495
allele frequency: 4.896957801766438e-1
allele num: 5095
num of homozygotes: 507

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.51014e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.202e0

MQ
type: SiteQuality
SIO_000300: 4.406e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.968000000000001e1

QD
type: SiteQuality
SIO_000300: 2.03e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.474e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7521
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33122
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.823154056517776e-4
allele num: 5485
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3381
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.871958068139274e-4
allele num: 5342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7559
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

MQ
type: SiteQuality
SIO_000300: 4.853e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.431722e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e0

VQSLOD
type: SiteQuality
SIO_000300: -2.246e0

QD
type: SiteQuality
SIO_000300: 1.291e1

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.203985190982151e-4
allele num: 33223
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5550
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5351
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7531
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3387
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.443145e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

FS
type: SiteQuality
SIO_000300: 1.3651e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

VQSLOD
type: SiteQuality
SIO_000300: -1.912e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

MQ
type: SiteQuality
SIO_000300: 4.462e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

QD
type: SiteQuality
SIO_000300: 1.564e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3483
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5457
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 475
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African
type: Population
allele count: 3
allele frequency: 3.940627873374491e-4
allele num: 7613
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5765
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DP
type: SiteQuality
SIO_000300: 1.515643e6

MQ
type: SiteQuality
SIO_000300: 4.679e1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.06e-1

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.225e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.714e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5621
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 4.948861761794787e-4
allele num: 6062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 1.291e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 1.595415e6

MQ
type: SiteQuality
SIO_000300: 4.433e1

QD
type: SiteQuality
SIO_000300: 1.206e1

VQSLOD
type: SiteQuality
SIO_000300: -2.098e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.369704129302476e-5
allele num: 37246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7833
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 503
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5741
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.46e0

VQSLOD
type: SiteQuality
SIO_000300: -1.699e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

QD
type: SiteQuality
SIO_000300: 1.258e1

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

FS
type: SiteQuality
SIO_000300: 5.347e0

MQ
type: SiteQuality
SIO_000300: 5.293e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.48e-1

DP
type: SiteQuality
SIO_000300: 1.636638e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8321
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.561212990472288e-5
allele num: 39044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.693994e6

FS
type: SiteQuality
SIO_000300: 1.744e0

MQ
type: SiteQuality
SIO_000300: 4.806e1

QD
type: SiteQuality
SIO_000300: 1.459e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.575e0

VQSLOD
type: SiteQuality
SIO_000300: -1.969e0

MQRankSum
type: SiteQuality
SIO_000300: 8.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5955
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8363
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7984
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.454333915066899e-4
allele num: 6876
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

DP
type: SiteQuality
SIO_000300: 1.701794e6

MQ
type: SiteQuality
SIO_000300: 5.251e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.976e-1

QD
type: SiteQuality
SIO_000300: 2.505e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.479851208927464e-4
allele num: 8065
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3925
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

FS
type: SiteQuality
SIO_000300: 9.015000000000001e0

MQ
type: SiteQuality
SIO_000300: 4.997e1

VQSLOD
type: SiteQuality
SIO_000300: -9.776e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

DP
type: SiteQuality
SIO_000300: 1.734291e6

QD
type: SiteQuality
SIO_000300: 3.037e1

Other
type: Population
allele count: 1
allele frequency: 1.733102253032929e-3
allele num: 577
num of homozygotes: 0

South Asian
type: Population
allele count: 1
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allele num: 8400
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8929
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European (Non-Finnish)
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allele count: 45
allele frequency: 1.022797008886969e-3
allele num: 43997
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East Asian
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allele frequency: 3.143171460003143e-4
allele num: 6363
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African
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allele num: 8310
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4248
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DP
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SIO_000300: 1.845724e6

FS
type: SiteQuality
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MQRankSum
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SIO_000300: -1.065e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.294e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.791e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
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SIO_000300: 5.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

MQ
type: SiteQuality
SIO_000300: 4.746e1

African
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allele num: 8390
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Latino
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South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.203128442388191e-5
allele num: 45390
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East Asian
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Other
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.95e-1

ReadPosRankSum
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: -6.95e-1

DP
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QD
type: SiteQuality
SIO_000300: 7.96e0

South Asian
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allele num: 8975
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Other
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East Asian
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allele count: 1
allele frequency: 1.536334306345061e-4
allele num: 6509
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European (Non-Finnish)
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European (Finnish)
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allele num: 4413
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African
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BaseQRankSum
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SIO_000300: -2.495e0

MQ
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SIO_000300: 4.484e1

ClippingRankSum
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FS
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MQRankSum
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.51e-2

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.215e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.268e0

Other
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allele frequency: 1.658374792703151e-3
allele num: 603
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European (Finnish)
type: Population
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allele num: 4429
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South Asian
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African
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allele count: 0
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allele num: 8424
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Latino
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allele count: 1
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East Asian
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allele count: 67
allele frequency: 1.027449777641466e-2
allele num: 6521
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.784e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

QD
type: SiteQuality
SIO_000300: 1.379e1

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

FS
type: SiteQuality
SIO_000300: 1.122e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

MQ
type: SiteQuality
SIO_000300: 5.002e1

DP
type: SiteQuality
SIO_000300: 1.903214e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.558e-1

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9145
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46157
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African
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allele count: 0
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allele num: 8433
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Latino
type: Population
allele count: 1
allele frequency: 1.091822251337482e-4
allele num: 9159
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4446
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.599e0

FS
type: SiteQuality
SIO_000300: 5.559e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

MQ
type: SiteQuality
SIO_000300: 4.834e1

VQSLOD
type: SiteQuality
SIO_000300: -1.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.493e0

DP
type: SiteQuality
SIO_000300: 1.907737e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

European (Finnish)
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allele count: 0
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allele num: 4448
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9151
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46207
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
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Latino
type: Population
allele count: 3
allele frequency: 3.276182155727859e-4
allele num: 9157
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East Asian
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allele frequency: 1.529285823520416e-4
allele num: 6539
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QD
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.041e0

MQ
type: SiteQuality
SIO_000300: 4.541e1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.908679e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.02e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

FS
type: SiteQuality
SIO_000300: 9.279999999999999e0

East Asian
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allele count: 0
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South Asian
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allele count: 1
allele frequency: 1.091822251337482e-4
allele num: 9159
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46244
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8433
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4451
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Other
type: Population
allele count: 0
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allele num: 610
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.943e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.36e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.91e-1

MQ
type: SiteQuality
SIO_000300: 4.338e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4451
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9159
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6541
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.161601314253599e-5
allele num: 46262
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South Asian
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Other
type: Population
allele count: 0
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allele num: 611
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DP
type: SiteQuality
SIO_000300: 1.904591e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.022e1

MQRankSum
type: SiteQuality
SIO_000300: 3.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.19e0

QD
type: SiteQuality
SIO_000300: 9.56e0

FS
type: SiteQuality
SIO_000300: 2.493e0

South Asian
type: Population
allele count: 1
allele frequency: 1.133272892112421e-4
allele num: 8824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9093
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8391
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45604
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Other
type: Population
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allele num: 601
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.831989e6

MQ
type: SiteQuality
SIO_000300: 4.637e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.34e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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European (Non-Finnish)
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allele count: 0
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allele num: 45219
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European (Finnish)
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allele count: 0
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East Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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allele num: 595
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QD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

European (Finnish)
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African
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Latino
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.252404441741559e-5
allele num: 44397
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East Asian
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Other
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QD
type: SiteQuality
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VQSLOD
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
type: SiteQuality
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FS
type: SiteQuality
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Latino
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South Asian
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allele count: 0
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European (Finnish)
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African
type: Population
allele count: 1
allele frequency: 1.562255897516013e-4
allele num: 6401
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Other
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East Asian
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
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MQRankSum
type: SiteQuality
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QD
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DP
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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African
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East Asian
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Latino
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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East Asian
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South Asian
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European (Finnish)
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Latino
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African
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.63e-1

DP
type: SiteQuality
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European (Non-Finnish)
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South Asian
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European (Finnish)
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allele count: 0
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Other
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allele num: 463
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Latino
type: Population
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African
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

FS
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

East Asian
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Latino
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num of homozygotes: 0

European (Finnish)
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Other
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South Asian
type: Population
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European (Non-Finnish)
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allele num: 31427
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FS
type: SiteQuality
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DP
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 2.919e1

VQSLOD
type: SiteQuality
SIO_000300: -5.529e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 1.723e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.758e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.971e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 459
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7004
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 6.128702757916241e-4
allele num: 4895
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6301
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31372
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

QD
type: SiteQuality
SIO_000300: 5.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.512e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

FS
type: SiteQuality
SIO_000300: 1.1764e1

MQ
type: SiteQuality
SIO_000300: 2.952e1

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

DP
type: SiteQuality
SIO_000300: 1.048552e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3331
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4898
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African
type: Population
allele count: 1
allele frequency: 1.600256040966555e-4
allele num: 6249
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VQSLOD
type: SiteQuality
SIO_000300: -4.771e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

DP
type: SiteQuality
SIO_000300: 1.037717e6

QD
type: SiteQuality
SIO_000300: 3.29e0

MQ
type: SiteQuality
SIO_000300: 3.124e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8185
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6883
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6178
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 6.137479541734861e-4
allele num: 4888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30995
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.351e0

QD
type: SiteQuality
SIO_000300: 8.210000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-2

DP
type: SiteQuality
SIO_000300: 1.024608e6

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

MQ
type: SiteQuality
SIO_000300: 3.061e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8103
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3195
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30229
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.005852e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.368e0

MQRankSum
type: SiteQuality
SIO_000300: -1.368e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.19e0

MQ
type: SiteQuality
SIO_000300: 3.31e1

QD
type: SiteQuality
SIO_000300: 5.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5867
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.231375446373599e-4
allele num: 8121
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4819
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3219
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30437
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.399e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.17e-1

FS
type: SiteQuality
SIO_000300: 1.172e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.64e-1

QD
type: SiteQuality
SIO_000300: 6.54e0

DP
type: SiteQuality
SIO_000300: 1.008332e6

VQSLOD
type: SiteQuality
SIO_000300: -3.854e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.54e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6607
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.724137931034483e-4
allele num: 5800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3206
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.677e0

VQSLOD
type: SiteQuality
SIO_000300: -3.883e0

MQ
type: SiteQuality
SIO_000300: 3.47e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

DP
type: SiteQuality
SIO_000300: 1.008428e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 4.66e0

European (Finnish)
type: Population
allele count: 5
allele frequency: 1.591849729385546e-3
allele num: 3141
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5693
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6537
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.77746e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

FS
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

MQ
type: SiteQuality
SIO_000300: 3.251e1

QD
type: SiteQuality
SIO_000300: 9.51e0

VQSLOD
type: SiteQuality
SIO_000300: -3.949e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.81e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.035232409675972e-4
allele num: 28979
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7881
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.558085749866572e-4
allele num: 5621
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2933
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.53e-2

FS
type: SiteQuality
SIO_000300: 1.04592e2

DP
type: SiteQuality
SIO_000300: 9.73711e5

QD
type: SiteQuality
SIO_000300: 2.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.316e0

MQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.209e1

MQ
type: SiteQuality
SIO_000300: 3.529e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3113
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8007
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5897
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.362927091740651e-5
allele num: 29736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 443
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.90492e5

QD
type: SiteQuality
SIO_000300: 7.13e0

FS
type: SiteQuality
SIO_000300: 2.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.734e0

VQSLOD
type: SiteQuality
SIO_000300: -3.584e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

MQ
type: SiteQuality
SIO_000300: 3.472e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.22e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4879
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31565
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.898e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

QD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 3.268e1

DP
type: SiteQuality
SIO_000300: 1.046565e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.206155819172812e-4
allele num: 6238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.079765937788728e-4
allele num: 3247
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.225340031858841e-4
allele num: 8161
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.276161306789178e-4
allele num: 31344
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.198e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.486e0

QD
type: SiteQuality
SIO_000300: 2.926e1

FS
type: SiteQuality
SIO_000300: 1.1331e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

DP
type: SiteQuality
SIO_000300: 1.051189e6

MQ
type: SiteQuality
SIO_000300: 3.512e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6886
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.448280083241523e-4
allele num: 8169
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3267
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4871
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.157562361856647e-5
allele num: 31670
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.117e0

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

DP
type: SiteQuality
SIO_000300: 1.058618e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.504e0

MQ
type: SiteQuality
SIO_000300: 3.587e1

QD
type: SiteQuality
SIO_000300: 1.922e1

VQSLOD
type: SiteQuality
SIO_000300: -2.924e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.55e-2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6269
num of homozygotes: 0

South Asian
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allele count: 0
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allele num: 6886
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East Asian
type: Population
allele count: 1
allele frequency: 2.052966536645453e-4
allele num: 4871
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8169
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3267
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.587e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.924e0

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 1.922e1

FS
type: SiteQuality
SIO_000300: 6.117e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.504e0

DP
type: SiteQuality
SIO_000300: 1.058618e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.55e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4871
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.224140041620761e-4
allele num: 8169
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.452221899506245e-4
allele num: 6886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6269
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3267
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.157562361856647e-5
allele num: 31670
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.924e0

QD
type: SiteQuality
SIO_000300: 1.922e1

MQ
type: SiteQuality
SIO_000300: 3.587e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.55e-2

FS
type: SiteQuality
SIO_000300: 6.117e0

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.504e0

DP
type: SiteQuality
SIO_000300: 1.058618e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4885
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26959
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5569
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 8.600301010535369e-4
allele num: 4651
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3215
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.278e0

FS
type: SiteQuality
SIO_000300: 1.53815e2

VQSLOD
type: SiteQuality
SIO_000300: -1.782e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.423e0

DP
type: SiteQuality
SIO_000300: 1.996596e6

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

MQ
type: SiteQuality
SIO_000300: 3.527e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.263e-1

QD
type: SiteQuality
SIO_000300: 4.8e0

European (Finnish)
type: Population
allele count: 2127
allele frequency: 6.615863141524105e-1
allele num: 3215
num of homozygotes: 13

Other
type: Population
allele count: 238
allele frequency: 6.246719160104987e-1
allele num: 381
num of homozygotes: 1

East Asian
type: Population
allele count: 2791
allele frequency: 6.000860030101054e-1
allele num: 4651
num of homozygotes: 35

African
type: Population
allele count: 3137
allele frequency: 5.632968216915065e-1
allele num: 5569
num of homozygotes: 22

European (Non-Finnish)
type: Population
allele count: 15733
allele frequency: 5.835898957676472e-1
allele num: 26959
num of homozygotes: 162

Latino
type: Population
allele count: 4487
allele frequency: 5.897739221871714e-1
allele num: 7608
num of homozygotes: 27

QD
type: SiteQuality
SIO_000300: 4.8e0

FS
type: SiteQuality
SIO_000300: 1.53815e2

VQSLOD
type: SiteQuality
SIO_000300: -1.782e1

DP
type: SiteQuality
SIO_000300: 1.996596e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.423e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.263e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.278e0

MQ
type: SiteQuality
SIO_000300: 3.527e1

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3070
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 9.365488176071178e-4
allele num: 4271
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5615
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.545e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

FS
type: SiteQuality
SIO_000300: 1.376e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.53e0

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

DP
type: SiteQuality
SIO_000300: 1.890576e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.228e-1

Other
type: Population
allele count: 60
allele frequency: 1.511335012594459e-1
allele num: 397
num of homozygotes: 0

African
type: Population
allele count: 1428
allele frequency: 2.543187889581478e-1
allele num: 5615
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5468
allele frequency: 1.87594346095787e-1
allele num: 29148
num of homozygotes: 0

East Asian
type: Population
allele count: 1098
allele frequency: 2.570826504331538e-1
allele num: 4271
num of homozygotes: 0

South Asian
type: Population
allele count: 1225
allele frequency: 1.81589089831011e-1
allele num: 6746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 249
allele frequency: 8.110749185667752e-2
allele num: 3070
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.890576e6

QD
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.228e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

MQ
type: SiteQuality
SIO_000300: 3.545e1

FS
type: SiteQuality
SIO_000300: 1.376e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.92e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 397
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3070
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.561887800534283e-4
allele num: 5615
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 3.087690407575134e-4
allele num: 29148
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.964719833975689e-4
allele num: 6746
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.890576e6

QD
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 1.376e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.228e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

MQ
type: SiteQuality
SIO_000300: 3.545e1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6359
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45505
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7935
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9263
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.608e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.279e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.97e0

FS
type: SiteQuality
SIO_000300: 2.242e0

QD
type: SiteQuality
SIO_000300: 2.821e1

DP
type: SiteQuality
SIO_000300: 2.125096e6

MQ
type: SiteQuality
SIO_000300: 3.736e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7891
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9251
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 613
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44805
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6321
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

FS
type: SiteQuality
SIO_000300: 2.865e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.997e0

MQ
type: SiteQuality
SIO_000300: 3.355e1

DP
type: SiteQuality
SIO_000300: 2.076031e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-2

QD
type: SiteQuality
SIO_000300: 2.29e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9145
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.217845030002609e-4
allele num: 7666
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.640150893882237e-4
allele num: 6097
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4315
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.045041279130526e-4
allele num: 9569
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.661e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.63e-1

MQ
type: SiteQuality
SIO_000300: 3.417e1

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-1

FS
type: SiteQuality
SIO_000300: 2.335e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

DP
type: SiteQuality
SIO_000300: 2.059465e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-2

QD
type: SiteQuality
SIO_000300: 9.5e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.024496406518878e-4
allele num: 9879
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.43e-1

MQ
type: SiteQuality
SIO_000300: 3.883e1

DP
type: SiteQuality
SIO_000300: 2.000153e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

QD
type: SiteQuality
SIO_000300: 1.703e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.36e0

East Asian
type: Population
allele count: 1
allele frequency: 1.598721023181455e-4
allele num: 6255
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9229
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.536e1

FS
type: SiteQuality
SIO_000300: 3.084e0

DP
type: SiteQuality
SIO_000300: 1.982153e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

QD
type: SiteQuality
SIO_000300: 1.03e1

VQSLOD
type: SiteQuality
SIO_000300: -3.098e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e0

African
type: Population
allele count: 1
allele frequency: 1.281394156842645e-4
allele num: 7804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9229
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6255
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43169
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.084e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQ
type: SiteQuality
SIO_000300: 3.536e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e0

DP
type: SiteQuality
SIO_000300: 1.982153e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e-1

QD
type: SiteQuality
SIO_000300: 1.03e1

VQSLOD
type: SiteQuality
SIO_000300: -3.098e0

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9193
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.062787136294027e-4
allele num: 9795
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.502090459901178e-5
allele num: 42096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4355
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6189
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

FS
type: SiteQuality
SIO_000300: 7.3e0

MQ
type: SiteQuality
SIO_000300: 3.506e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

QD
type: SiteQuality
SIO_000300: 4.33e0

MQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

DP
type: SiteQuality
SIO_000300: 1.970232e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7753
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 597
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4355
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6189
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.970232e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

QD
type: SiteQuality
SIO_000300: 4.33e0

MQ
type: SiteQuality
SIO_000300: 3.506e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
SIO_000300: 7.3e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7759
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.022494887525562e-4
allele num: 9780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 595
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 8.49e0

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.423e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

MQ
type: SiteQuality
SIO_000300: 3.503e1

VQSLOD
type: SiteQuality
SIO_000300: -4.111e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 1.211e1

DP
type: SiteQuality
SIO_000300: 1.97011e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3557
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35535
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.117096e6

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 2.585e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

South Asian
type: Population
allele count: 1
allele frequency: 1.506024096385542e-4
allele num: 6640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35479
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.61164794985636e-4
allele num: 7658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 481
num of homozygotes: 0

African
type: Population
allele count: 51
allele frequency: 6.861294228440737e-3
allele num: 7433
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.123551e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.91e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.857e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.623e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 1
allele frequency: 1.303441084462982e-4
allele num: 7672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.81048874399258e-5
allele num: 35581
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 487
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.489868891537545e-4
allele num: 6712
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.134008e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.484e0

VQSLOD
type: SiteQuality
SIO_000300: -2.708e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

FS
type: SiteQuality
SIO_000300: 2.094e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.819e1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.776929271611452e-5
allele num: 36011
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 491
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.862891207153502e-4
allele num: 5368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7737
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6804
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.544e1

FS
type: SiteQuality
SIO_000300: 5.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.62e0

VQSLOD
type: SiteQuality
SIO_000300: 5.27e-1

DP
type: SiteQuality
SIO_000300: 1.159742e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2