19-58757807-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757807
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757807
    reference: chr 19
allele count: 1
allele frequency: 8.273214640280627e-6
allele num: 120872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+51C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+14C>G
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

19-58757817-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757817
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757817
    reference: chr 19
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+61G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+24G>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-58757823-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757823
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757823
    reference: chr 19
allele count: 1
allele frequency: 8.300959590928711e-6
allele num: 120468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+67C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+30C>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/19-58757827-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757827
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757827
    reference: chr 19
allele count: 2
allele frequency: 1.662068277764851e-5
allele num: 120332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+71C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+34C>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

19-58757827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757827
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757827
    reference: chr 19
allele count: 4
allele frequency: 3.324136555529701e-5
allele num: 120332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+71C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+34C>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

19-58757834-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757834
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757834
    reference: chr 19
allele count: 1
allele frequency: 8.322237017310253e-6
allele num: 120160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+78A>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+41A>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5804
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/19-58757835-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757835
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757835
    reference: chr 19
allele count: 1
allele frequency: 8.334583520861462e-6
allele num: 119982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+79C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+42C>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-58757839-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757839
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757839
    reference: chr 19
allele count: 1
allele frequency: 8.344459279038718e-6
allele num: 119840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+83A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+46A>G
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7130
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

19-58757844-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58757844
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58757844
    reference: chr 19
allele count: 3
allele frequency: 2.505344735435596e-5
allele num: 119744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.119+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-232+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.502+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.123+88G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+51G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.119+51G>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-58758032-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758032
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758032
    reference: chr 19
allele count: 1
allele frequency: 8.353521009105338e-6
allele num: 119710
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-45T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-80T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-45T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-45T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-45T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-45T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-80T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+239T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-45T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-80T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-45T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+239T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-45T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-80T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+239T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-80T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-80T>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-80T>G
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-58758033-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758033
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758033
    reference: chr 19
allele count: 1
allele frequency: 8.357849692431131e-6
allele num: 119648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-79G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-79G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-79G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-44G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-44G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-44G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+240G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-79G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-44G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-44G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-79G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-44G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-79G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+240G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+240G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-44G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-44G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-79G>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10543
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/19-58758040-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758040
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758040
    reference: chr 19
allele count: 2
allele frequency: 1.668669069550127e-5
allele num: 119856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-72A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+247A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-72A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-72A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+247A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-72A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-72A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-72A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-72A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+247A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-37A>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8970
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-58758042-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758042
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758042
    reference: chr 19
allele count: 14
allele frequency: 1.167834501167835e-4
allele num: 119880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-70G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-35G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-70G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+249G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-35G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-35G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+249G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+249G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-70G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-70G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-35G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-35G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-35G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-70G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-70G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-35G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-35G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-70G>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

19-58758043-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758043
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758043
    reference: chr 19
allele count: 1
allele frequency: 8.345016356232058e-6
allele num: 119832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-34C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-69C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-34C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-34C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-69C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+250C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-34C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+250C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-34C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-69C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-34C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-34C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-69C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-69C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-69C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-69C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+250C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-34C>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP

19-58758047-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758047
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758047
    reference: chr 19
allele count: 1
allele frequency: 8.32639467110741e-6
allele num: 120100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+254G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-30G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-30G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-30G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-65G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+254G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-65G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-30G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-65G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-30G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-30G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-65G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+254G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-30G>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-65G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-65G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-65G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-30G>C
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

19-58758050-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758050
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758050
    reference: chr 19
allele count: 1
allele frequency: 8.31766839119658e-6
allele num: 120226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-62G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+257G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-62G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-62G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-27G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-27G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-62G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+257G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-27G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+257G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-62G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-27G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-27G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-27G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-27G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-62G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-27G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-62G>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6635
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

19-58758052-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758052
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758052
    reference: chr 19
allele count: 1
allele frequency: 8.306061763875276e-6
allele num: 120394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+259A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-60A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-60A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+259A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-25A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-25A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-25A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+259A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-25A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-25A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-25A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-25A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-60A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-25A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-60A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-60A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-60A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-60A>G
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8998
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/19-58758057-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758057
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758057
    reference: chr 19
allele count: 1
allele frequency: 8.298892927683448e-6
allele num: 120498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-20C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+264C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-20C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-55C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-20C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-55C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-20C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-20C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-55C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+264C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-55C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-20C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+264C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-55C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-55C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-20C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-55C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-20C>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-58758064-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758064
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758064
    reference: chr 19
allele count: 12
allele frequency: 9.929993545504196e-5
allele num: 120846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-48C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-48C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-13C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-48C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-48C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-13C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-13C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+271C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-13C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-13C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+271C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-48C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-13C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-48C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-13C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-48C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-13C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+271C>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

19-58758065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758065
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758065
    reference: chr 19
allele count: 4
allele frequency: 3.308519437551696e-5
allele num: 120900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.161-12G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.161-12G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-47G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.161-12G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-47G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+272G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.161-12G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-47G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+272G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.161-12G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-47G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.161-12G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-47G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+272G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-47G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.124-12G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-47G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.120-12G>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-58758090-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758090
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758090
    reference: chr 19
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+297C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.137C>T
  hgvsp: ENSP00000469018.1:p.Pro46Leu
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.174C>T
  hgvsp: ENST00000597240.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.174C>T
  hgvsp: ENST00000269829.4:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-22C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+297C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.174C>T
  hgvsp: ENST00000596929.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-22C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.174C>T
  hgvsp: ENST00000595981.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-22C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-22C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.174C>T
  hgvsp: ENST00000596652.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-22C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.133C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.174C>T
  hgvsp: ENST00000333581.5:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-22C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-22C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+297C>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro46Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/19-58758095-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758095
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758095
    reference: chr 19
allele count: 8
allele frequency: 6.597394029358403e-5
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.179C>A
  hgvsp: ENSP00000468975.1:p.Ser60Tyr
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+302C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-17C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+302C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.179C>A
  hgvsp: ENSP00000470843.1:p.Ser60Tyr
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-17C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+302C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-17C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.179C>A
  hgvsp: ENSP00000470645.1:p.Ser60Tyr
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.142C>A
  hgvsp: ENSP00000469018.1:p.Leu48Met
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-17C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.179C>A
  hgvsp: ENSP00000329320.5:p.Ser60Tyr
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.138C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-17C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.179C>A
  hgvsp: ENSP00000469635.1:p.Ser60Tyr
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.179C>A
  hgvsp: ENSP00000269829.4:p.Ser60Tyr
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-17C>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-17C>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu48Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

19-58758097-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758097
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758097
    reference: chr 19
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.144G>C
  hgvsp: ENST00000600029.1:c.144G>C(p.%3D)
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.181G>C
  hgvsp: ENSP00000329320.5:p.Asp61His
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.140G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-15G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-15G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.181G>C
  hgvsp: ENSP00000470645.1:p.Asp61His
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+304G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.181G>C
  hgvsp: ENSP00000468975.1:p.Asp61His
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.181G>C
  hgvsp: ENSP00000470843.1:p.Asp61His
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-15G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.181G>C
  hgvsp: ENSP00000469635.1:p.Asp61His
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.181G>C
  hgvsp: ENSP00000269829.4:p.Asp61His
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-15G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+304G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+304G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-15G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-15G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-15G>C
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp61His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

19-58758103-ATC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758103
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758101
    reference: chr 19
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+315_160+316delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.120-4_120-3delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.192_193delTC
  hgvsp: ENSP00000468975.1:p.Gln65AlafsTer?
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.192_193delTC
  hgvsp: ENSP00000470645.1:p.Gln65AlafsTer?
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.161-4_161-3delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.192_193delTC
  hgvsp: ENSP00000470843.1:p.Gln65AlafsTer35
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.192_193delTC
  hgvsp: ENSP00000329320.5:p.Gln65AlafsTer30
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.192_193delTC
  hgvsp: ENSP00000269829.4:p.Gln65AlafsTer23
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.161-4_161-3delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-231-4_-231-3delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.503-4_503-3delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.161-4_161-3delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.192_193delTC
  hgvsp: ENSP00000469635.1:p.Gln65AlafsTer23
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+315_160+316delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.151_152delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+315_160+316delTC
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*5_*6delTC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.161-4_161-3delTC
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 11150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11557
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln65AlafsTer23
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: ATC
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-58758118-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758118
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758117
    reference: chr 19
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.204delA
  hgvsp: ENSP00000468975.1:p.Glu69LysfsTer?
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.204delA
  hgvsp: ENSP00000269829.4:p.Glu69LysfsTer24
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*17delA
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-223delA
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.128delA
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.204delA
  hgvsp: ENSP00000470843.1:p.Glu69LysfsTer27
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+327delA
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.163delA
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.169delA
  hgvsp: ENSP00000472512.1:p.Arg57GlufsTer648
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.204delA
  hgvsp: ENSP00000329320.5:p.Glu69LysfsTer24
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.204delA
  hgvsp: ENSP00000469635.1:p.Glu69LysfsTer24
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+327delA
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.169delA
  hgvsp: ENSP00000471480.1:p.Arg57GlufsTer648
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.204delA
  hgvsp: ENSP00000470645.1:p.Glu69LysfsTer?
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.169delA
  hgvsp: ENSP00000471452.1:p.Arg57GlufsTer15
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.511delA
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.169delA
  hgvsp: ENSP00000472614.1:p.Arg57GlufsTer?
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+327delA
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu69LysfsTer24
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CA
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

19-58758126-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758126
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758126
    reference: chr 19
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.175G>C
  hgvsp: ENSP00000472512.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.210G>C
  hgvsp: ENSP00000470645.1:p.Glu70Asp
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.210G>C
  hgvsp: ENSP00000329320.5:p.Glu70Asp
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.134G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.210G>C
  hgvsp: ENSP00000470843.1:p.Glu70Asp
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.210G>C
  hgvsp: ENSP00000468975.1:p.Glu70Asp
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-217G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.175G>C
  hgvsp: ENSP00000471452.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.210G>C
  hgvsp: ENSP00000269829.4:p.Glu70Asp
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+333G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.175G>C
  hgvsp: ENSP00000472614.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*23G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.210G>C
  hgvsp: ENSP00000469635.1:p.Glu70Asp
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.175G>C
  hgvsp: ENSP00000471480.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.517G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+333G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+333G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.169G>C
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu70Asp
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-58758147-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758147
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758147
    reference: chr 19
allele count: 1
allele frequency: 8.251778258214646e-6
allele num: 121186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.231G>A
  hgvsp: ENST00000595981.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.231G>A
  hgvsp: ENST00000596929.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.231G>A
  hgvsp: ENST00000597240.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.196G>A
  hgvsp: ENSP00000472512.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.196G>A
  hgvsp: ENSP00000472614.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.231G>A
  hgvsp: ENST00000333581.5:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-196G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.190G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+354G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.538G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.231G>A
  hgvsp: ENST00000269829.4:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+354G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+354G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.196G>A
  hgvsp: ENSP00000471452.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.196G>A
  hgvsp: ENSP00000471480.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*44G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.155G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.231G>A
  hgvsp: ENST00000596652.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly66Arg
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

19-58758152-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758152
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758152
    reference: chr 19
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.236C>G
  hgvsp: ENSP00000470843.1:p.Ala79Gly
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.201C>G
  hgvsp: ENST00000594384.1:c.201C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.543C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.236C>G
  hgvsp: ENSP00000469635.1:p.Ala79Gly
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.236C>G
  hgvsp: ENSP00000470645.1:p.Ala79Gly
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+359C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.236C>G
  hgvsp: ENSP00000329320.5:p.Ala79Gly
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-191C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.236C>G
  hgvsp: ENSP00000468975.1:p.Ala79Gly
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.236C>G
  hgvsp: ENSP00000269829.4:p.Ala79Gly
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.195C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.201C>G
  hgvsp: ENST00000596677.1:c.201C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*49C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+359C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.201C>G
  hgvsp: ENST00000599227.1:c.201C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.201C>G
  hgvsp: ENST00000596825.1:c.201C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+359C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.160C>G
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala79Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

19-58758152-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758152
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758152
    reference: chr 19
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.236C>T
  hgvsp: ENSP00000470645.1:p.Ala79Val
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.201C>T
  hgvsp: ENST00000594384.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.236C>T
  hgvsp: ENSP00000470843.1:p.Ala79Val
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+359C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.236C>T
  hgvsp: ENSP00000468975.1:p.Ala79Val
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.201C>T
  hgvsp: ENST00000596677.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.236C>T
  hgvsp: ENSP00000269829.4:p.Ala79Val
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.236C>T
  hgvsp: ENSP00000469635.1:p.Ala79Val
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+359C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+359C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.201C>T
  hgvsp: ENST00000596825.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*49C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.236C>T
  hgvsp: ENSP00000329320.5:p.Ala79Val
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.543C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-191C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.195C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.160C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.201C>T
  hgvsp: ENST00000599227.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala79Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

19-58758153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758153
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758153
    reference: chr 19
allele count: 4
allele frequency: 3.302019184731463e-5
allele num: 121138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-190C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.202C>T
  hgvsp: ENSP00000472512.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.196C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+360C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.202C>T
  hgvsp: ENSP00000472614.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.237C>T
  hgvsp: ENST00000596929.1:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+360C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.202C>T
  hgvsp: ENSP00000471480.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.237C>T
  hgvsp: ENST00000596652.1:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.237C>T
  hgvsp: ENST00000333581.5:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.237C>T
  hgvsp: ENST00000597240.1:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.202C>T
  hgvsp: ENSP00000471452.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+360C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.237C>T
  hgvsp: ENST00000269829.4:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.161C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.237C>T
  hgvsp: ENST00000595981.1:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*50C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.544C>T
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10279
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro68Ser
num of homozygotes: 1
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD

19-58758154-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758154
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758154
    reference: chr 19
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.238C>T
  hgvsp: ENSP00000468975.1:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.238C>T
  hgvsp: ENSP00000269829.4:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.238C>T
  hgvsp: ENSP00000470645.1:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.238C>T
  hgvsp: ENSP00000469635.1:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+361C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.203C>T
  hgvsp: ENSP00000471480.1:p.Pro68Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.238C>T
  hgvsp: ENSP00000329320.5:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.203C>T
  hgvsp: ENSP00000471452.1:p.Pro68Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.238C>T
  hgvsp: ENSP00000470843.1:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-189C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+361C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*51C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+361C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.197C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.203C>T
  hgvsp: ENSP00000472614.1:p.Pro68Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.162C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.545C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.203C>T
  hgvsp: ENSP00000472512.1:p.Pro68Leu
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro80Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-58758158-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758158
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758158
    reference: chr 19
allele count: 5
allele frequency: 4.128410066715107e-5
allele num: 121112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+365G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.207G>A
  hgvsp: ENST00000599227.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*55G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.207G>A
  hgvsp: ENST00000596825.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+365G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.201G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.207G>A
  hgvsp: ENST00000596677.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-185G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.549G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.242G>A
  hgvsp: ENSP00000269829.4:p.Arg81Gln
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.242G>A
  hgvsp: ENSP00000470645.1:p.Arg81Gln
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.242G>A
  hgvsp: ENSP00000470843.1:p.Arg81Gln
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.242G>A
  hgvsp: ENSP00000469635.1:p.Arg81Gln
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.242G>A
  hgvsp: ENSP00000329320.5:p.Arg81Gln
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.242G>A
  hgvsp: ENSP00000468975.1:p.Arg81Gln
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.207G>A
  hgvsp: ENST00000594384.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+365G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.166G>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg81Gln
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

19-58758158-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758158
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758158
    reference: chr 19
allele count: 2
allele frequency: 1.651364026686043e-5
allele num: 121112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.201G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.242G>C
  hgvsp: ENSP00000329320.5:p.Arg81Pro
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-185G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.166G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+365G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.242G>C
  hgvsp: ENSP00000470843.1:p.Arg81Pro
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.242G>C
  hgvsp: ENSP00000269829.4:p.Arg81Pro
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.242G>C
  hgvsp: ENSP00000470645.1:p.Arg81Pro
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.207G>C
  hgvsp: ENST00000594384.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.242G>C
  hgvsp: ENSP00000469635.1:p.Arg81Pro
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.207G>C
  hgvsp: ENST00000596825.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*55G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.207G>C
  hgvsp: ENST00000596677.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+365G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.242G>C
  hgvsp: ENSP00000468975.1:p.Arg81Pro
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+365G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.207G>C
  hgvsp: ENST00000599227.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.549G>C
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg81Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

19-58758158-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758158
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758158
    reference: chr 19
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.166G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.242G>T
  hgvsp: ENSP00000470843.1:p.Arg81Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.242G>T
  hgvsp: ENSP00000468975.1:p.Arg81Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.242G>T
  hgvsp: ENSP00000329320.5:p.Arg81Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.549G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.207G>T
  hgvsp: ENST00000599227.1:c.207G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.242G>T
  hgvsp: ENSP00000269829.4:p.Arg81Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*55G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.207G>T
  hgvsp: ENST00000596825.1:c.207G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.207G>T
  hgvsp: ENST00000596677.1:c.207G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.242G>T
  hgvsp: ENSP00000469635.1:p.Arg81Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.242G>T
  hgvsp: ENSP00000470645.1:p.Arg81Leu
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-185G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.201G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+365G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.207G>T
  hgvsp: ENST00000594384.1:c.207G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+365G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+365G>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg81Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

19-58758161-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758161
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758161
    reference: chr 19
allele count: 8
allele frequency: 6.606765327695561e-5
allele num: 121088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+368G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+368G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+368G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+1G>A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.552G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+1G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+1G>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*57+1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

19-58758166-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758166
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758166
    reference: chr 19
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+373A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+6A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+373A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.557A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+6A>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+373A>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11507
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*57+6A>T
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

19-58758172-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758172
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758172
    reference: chr 19
allele count: 4
allele frequency: 3.305293427424019e-5
allele num: 121018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000596597
  gene symbol: ZNF544
  hgvsc: ENST00000596597.1:n.563C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+379C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+379C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+12C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+379C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+12C>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+12C>G
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-58758185-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758185
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758185
    reference: chr 19
allele count: 1
allele frequency: 8.269109913008963e-6
allele num: 120932
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+392A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+392A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+392A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+25A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+25A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+25A>C
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

19-58758186-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758186
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758186
    reference: chr 19
allele count: 1
allele frequency: 8.271024945411235e-6
allele num: 120904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+393G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+393G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+26G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+26G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+393G>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP

19-58758191-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758191
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758191
    reference: chr 19
allele count: 1
allele frequency: 8.275405494869249e-6
allele num: 120840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+398A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+398A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+398A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+31A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+31A>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-58758193-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758193
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758193
    reference: chr 19
allele count: 1
allele frequency: 8.27787159365584e-6
allele num: 120804
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+400G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+33G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+400G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+400G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+33G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+33G>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-58758197-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758197
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758197
    reference: chr 19
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+404A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+404A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+404A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+37A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+37A>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+37A>C
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

19-58758207-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758207
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758207
    reference: chr 19
allele count: 4
allele frequency: 3.318841060701603e-5
allele num: 120524
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+414G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+47G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.203+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+414G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.244+47G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+414G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+47G>T
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9520
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10429
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

19-58758621-CTTTTGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758621
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758615
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+845_160+850delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.204-10_204-5delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+478_244+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+478_244+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+478_209+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.245-10_245-5delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+478_244+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+478_209+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+845_160+850delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+478_*57+483delGTTTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+478_209+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+478_244+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+478_-183+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+478_168+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+845_160+850delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+478_244+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+478_209+483delGTTTTT
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: CTTTTGT
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-58758661-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758661
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758661
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+868C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+868C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.258C>T
  hgvsp: ENST00000597240.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.217C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+501C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+501C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+868C>T
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu86Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-58758675-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58758675
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58758675
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000600775
  gene symbol: ZNF544
  hgvsc: ENST00000600775.1:n.231T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+882T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+882T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000468975
  ensembl transcript: ENST00000597240
  gene symbol: ZNF544
  hgvsc: ENST00000597240.1:c.272T>C
  hgvsp: ENSP00000468975.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.244+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+882T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+515T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+515T>C
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu91Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

19-58762628-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762628
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762628
    reference: chr 19
allele count: 17
allele frequency: 1.5506704369242e-4
allele num: 109630
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4835G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-46G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4835G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4835G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4468G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4468G>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12882
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8883
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

19-58762631-A-AGTTGGTAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762631
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762639
    reference: chr 19
allele count: 1
allele frequency: 9.107634018834588e-6
allele num: 109798
alternate allele: AGTTGGTAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5047
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

19-58762631-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762631
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762631
    reference: chr 19
allele count: 2
allele frequency: 1.821526803766918e-5
allele num: 109798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4471A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4838A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-43A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4471A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4838A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4838A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4471A>G
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5047
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

19-58762638-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762638
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762638
    reference: chr 19
allele count: 2
allele frequency: 1.817686085613014e-5
allele num: 110030
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4845A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-36A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4845A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4478A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4478A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4845A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4478A>G
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14006
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

19-58762650-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762650
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762649
    reference: chr 19
allele count: 1
allele frequency: 8.991673710144407e-6
allele num: 111214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4858delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4858delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4858delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-23delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4491delT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4491delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4491delT
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: AT
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-58762657-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762657
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762657
    reference: chr 19
allele count: 1
allele frequency: 8.943103972526785e-6
allele num: 111818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4864G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4497G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-17G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4864G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4497G>A
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4864G>A
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

19-58762658-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762658
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762658
    reference: chr 19
allele count: 1
allele frequency: 8.937508937508938e-6
allele num: 111888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4865G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4865G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4865G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-16G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4498G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4498G>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

19-58762662-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762662
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762662
    reference: chr 19
allele count: 1
allele frequency: 8.917424647761727e-6
allele num: 112140
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4869T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4869T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4869T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4502T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4502T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-12T>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4502T>C
  variant of: http://identifiers.org/hgnc/16759
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

19-58762663-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762663
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762661
    reference: chr 19
allele count: 9
allele frequency: 8.023535704733886e-5
allele num: 112170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-8_245-7delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4506_244+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4506_244+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4506_244+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4506_168+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4506_-183+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4506_209+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4506_209+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4873_160+4874delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4873_160+4874delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4506_209+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4873_160+4874delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4506_244+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4506_209+4507delTT
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4506_*57+4507delTT
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28383
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: CTT
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-58762669-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762669
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762669
    reference: chr 19
allele count: 1
allele frequency: 8.8974304220941e-6
allele num: 112392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4876A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245-5A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4509A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4876A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4509A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4876A>G
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.245-5A>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

19-58762674-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762674
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762674
    reference: chr 19
allele count: 1
allele frequency: 8.891259891526629e-6
allele num: 112470
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4514G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.245G>C
  hgvsp: ENSP00000329320.5:p.Gly82Ala
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4881G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4881G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4514G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4881G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4514G>C
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly82Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

19-58762676-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762676
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762676
    reference: chr 19
allele count: 3
allele frequency: 2.666666666666667e-5
allele num: 112500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4883A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.247A>G
  hgvsp: ENSP00000329320.5:p.Thr83Ala
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4883A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4516A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4516A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4883A>G
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr83Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

19-58762677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762677
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762677
    reference: chr 19
allele count: 1
allele frequency: 8.888256835069507e-6
allele num: 112508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4517C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4884C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.248C>T
  hgvsp: ENSP00000329320.5:p.Thr83Ile
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4884C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4884C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4517C>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4517C>T
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr83Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

19-58762682-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762682
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762682
    reference: chr 19
allele count: 26
allele frequency: 2.309838133650788e-4
allele num: 112562
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.253G>C
  hgvsp: ENSP00000329320.5:p.Gly85Arg
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4522G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4889G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4889G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4889G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4522G>C
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4522G>C
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly85Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

19-58762683-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762683
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762683
    reference: chr 19
allele count: 1
allele frequency: 8.883519295003909e-6
allele num: 112568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.254G>T
  hgvsp: ENSP00000329320.5:p.Gly85Val
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4523G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4890G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4890G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4523G>T
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4890G>T
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly85Val
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

19-58762690-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762690
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762690
    reference: chr 19
allele count: 1
allele frequency: 8.878313830637286e-6
allele num: 112634
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4897A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4530A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.261A>G
  hgvsp: ENST00000333581.5:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4897A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4897A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4530A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4530A>G
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser87Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

19-58762699-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58762699
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58762699
    reference: chr 19
allele count: 1
allele frequency: 8.877998544008238e-6
allele num: 112638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471480
  ensembl transcript: ENST00000599227
  gene symbol: ZNF544
  hgvsc: ENST00000599227.1:c.209+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl transcript: ENST00000598880
  gene symbol: ZNF544
  hgvsc: ENST00000598880.1:n.168+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269545
  ensembl protein: ENSP00000469018
  ensembl transcript: ENST00000600029
  gene symbol: CTD-3138B18.4
  hgvsc: ENST00000600029.1:c.*57+4539A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469514
  ensembl transcript: ENST00000599953
  gene symbol: ZNF544
  hgvsc: ENST00000599953.1:c.-183+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471684
  ensembl transcript: ENST00000600220
  gene symbol: ZNF544
  hgvsc: ENST00000600220.1:c.160+4906A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472512
  ensembl transcript: ENST00000596825
  gene symbol: ZNF544
  hgvsc: ENST00000596825.1:c.209+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472721
  ensembl transcript: ENST00000600044
  gene symbol: ZNF544
  hgvsc: ENST00000600044.1:c.160+4906A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000469635
  ensembl transcript: ENST00000596652
  gene symbol: ZNF544
  hgvsc: ENST00000596652.1:c.244+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470843
  ensembl transcript: ENST00000595981
  gene symbol: ZNF544
  hgvsc: ENST00000595981.1:c.244+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000329320
  ensembl transcript: ENST00000333581
  gene symbol: ZNF544
  hgvsc: ENST00000333581.5:c.270A>G
  hgvsp: ENST00000333581.5:c.270A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000471452
  ensembl transcript: ENST00000596677
  gene symbol: ZNF544
  hgvsc: ENST00000596677.1:c.209+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000394341
  ensembl transcript: ENST00000415203
  gene symbol: ZNF544
  hgvsc: ENST00000415203.2:c.160+4906A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000472614
  ensembl transcript: ENST00000594384
  gene symbol: ZNF544
  hgvsc: ENST00000594384.1:c.209+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000269829
  ensembl transcript: ENST00000269829
  gene symbol: ZNF544
  hgvsc: ENST00000269829.4:c.244+4539A>G
  variant of: http://identifiers.org/hgnc/16759
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198131
  ensembl protein: ENSP00000470645
  ensembl transcript: ENST00000596929
  gene symbol: ZNF544
  hgvsc: ENST00000596929.1:c.244+4539A>G
  variant of: http://identifiers.org/hgnc/16759
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr90Thr
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 6804
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4793
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5295
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2301
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7146
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6715
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 868
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 652
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 253
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1590
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5808
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4765
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3381
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1524
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2376
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5752
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40032
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16208
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.284e0

DP
type: SiteQuality
SIO_000300: 3.086317e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.739e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: -4.35e-1

FS
type: SiteQuality
SIO_000300: 3.825e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 1.512e1

GenotypeDepth
all individuals: 3381
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 343
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7147
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1476
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6713
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 730
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 813
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5263
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4487
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 653
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4041
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1589
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2301
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4430
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2256
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40029
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2228
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3001
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504936190705514e-5
allele num: 66448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16082
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.386e0

QD
type: SiteQuality
SIO_000300: 1.389e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

FS
type: SiteQuality
SIO_000300: 7.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

DP
type: SiteQuality
SIO_000300: 3.069297e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.362e0

VQSLOD
type: SiteQuality
SIO_000300: -1.534e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeDepth
all individuals: 7141
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1800
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1588
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6712
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6796
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4430
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 652
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3381
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1231
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3522
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5808
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2141
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 813
bin: 8.75e1
variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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South Asian
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European (Non-Finnish)
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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FS
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VQSLOD
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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Other
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Latino
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European (Finnish)
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VQSLOD
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FS
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QD
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BaseQRankSum
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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East Asian
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Latino
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African
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South Asian
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European (Finnish)
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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Other
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DP
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQ
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MQRankSum
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QD
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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SIO_000300: 3.03582e6

ClippingRankSum
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VQSLOD
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QD
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MQ
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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SIO_000300: -1.374e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 2.887391722810395e-4
allele num: 10390
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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MQRankSum
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BaseQRankSum
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MQ
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FS
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VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515427047341941e-5
allele num: 65988
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.29e-1

BaseQRankSum
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SIO_000300: -4.75e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

DP
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FS
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QD
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MQ
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VQSLOD
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SIO_000300: -1.178e0

ClippingRankSum
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SIO_000300: -1.012e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.516070345664039e-5
allele num: 65960
num of homozygotes: 0

European (Finnish)
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South Asian
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allele count: 0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.203e0

FS
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BaseQRankSum
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SIO_000300: 4.34e-1

ReadPosRankSum
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DP
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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SIO_000300: -3.0e-4

MQ
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SIO_000300: 5.342e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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allele frequency: 0.0e0
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Latino
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African
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allele count: 1
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.514554872323024e-5
allele num: 66026
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FS
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DP
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MQRankSum
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QD
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MQ
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 12
allele frequency: 1.159420289855072e-3
allele num: 10350
num of homozygotes: 0

Latino
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allele num: 11528
num of homozygotes: 0

East Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.514325519413653e-5
allele num: 66036
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South Asian
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MQ
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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FS
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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VQSLOD
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African
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.052916578923618e-4
allele num: 66482
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 2.595604775912787e-4
allele num: 11558
num of homozygotes: 0

South Asian
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allele frequency: 6.125199068969742e-5
allele num: 16326
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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VQSLOD
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DP
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 6.0e1

FS
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SIO_000300: 2.706e0

BaseQRankSum
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SIO_000300: 6.52e-1

ClippingRankSum
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SIO_000300: -4.05e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
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allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.007337904486948e-5
allele num: 66504
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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MQ
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SIO_000300: 5.975e1

ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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SIO_000300: 2.169499e6

QD
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SIO_000300: 1.435e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
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SIO_000300: 2.177311e6

ReadPosRankSum
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SIO_000300: 1.24e0

ClippingRankSum
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SIO_000300: -6.6e-1

MQRankSum
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BaseQRankSum
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FS
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SIO_000300: 4.772e0

InbreedingCoeff
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SIO_000300: 0.0e0

QD
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SIO_000300: 8.94e0

VQSLOD
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SIO_000300: 3.7e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 9.00144023043687e-5
allele num: 66656
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 8.83e-1

DP
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MQRankSum
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SIO_000300: 4.46e-1

MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele count: 0
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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DP
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BaseQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 6.05913717886573e-5
allele num: 16504
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
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MQ
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ReadPosRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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DP
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MQ
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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FS
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DP
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MQ
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VQSLOD
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Latino
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African
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East Asian
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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VQSLOD
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MQ
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East Asian
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African
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MQ
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African
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 9.013068949977468e-5
allele num: 66570
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South Asian
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Latino
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.935733643050716e-4
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East Asian
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VQSLOD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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ClippingRankSum
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ReadPosRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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BaseQRankSum
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QD
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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African
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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FS
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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Latino
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African
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European (Non-Finnish)
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European (Finnish)
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Other
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ClippingRankSum
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ReadPosRankSum
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QD
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VQSLOD
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FS
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DP
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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Latino
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African
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East Asian
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MQRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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QD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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Other
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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MQ
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MQRankSum
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FS
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DP
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ReadPosRankSum
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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MQ
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ClippingRankSum
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QD
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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QD
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DP
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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African
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South Asian
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Latino
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European (Finnish)
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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VQSLOD
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DP
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MQRankSum
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MQ
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BaseQRankSum
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East Asian
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Latino
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European (Finnish)
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Other
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MQRankSum
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FS
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MQ
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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European (Finnish)
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Latino
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African
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Other
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South Asian
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VQSLOD
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MQRankSum
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FS
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MQ
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QD
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African
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East Asian
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European (Non-Finnish)
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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African
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East Asian
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ClippingRankSum
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DP
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InbreedingCoeff
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QD
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VQSLOD
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MQ
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Latino
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Other
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 15926
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East Asian
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Other
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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VQSLOD
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ReadPosRankSum
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FS
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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ClippingRankSum
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BaseQRankSum
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FS
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DP
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ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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South Asian
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East Asian
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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QD
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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Other
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Latino
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ClippingRankSum
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MQRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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FS
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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African
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South Asian
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InbreedingCoeff
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MQ
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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FS
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DP
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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European (Finnish)
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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MQ
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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East Asian
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Other
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Latino
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European (Non-Finnish)
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QD
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FS
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MQ
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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Latino
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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European (Finnish)
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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South Asian
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Latino
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ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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QD
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InbreedingCoeff
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MQ
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ClippingRankSum
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FS
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 667
bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.631534294850878e-5
allele num: 61292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

FS
type: SiteQuality
SIO_000300: 2.648e0

VQSLOD
type: SiteQuality
SIO_000300: -4.762e-1

DP
type: SiteQuality
SIO_000300: 1.501724e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e0

QD
type: SiteQuality
SIO_000300: 7.34e0

GenotypeDepth
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bin: 6.25e1
variant carriers: 3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 1.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 26

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 2.705361534677816e-3
allele num: 8132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61320
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.178942165101334e-5
allele num: 16184
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.652050919377652e-4
allele num: 11312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.178e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

FS
type: SiteQuality
SIO_000300: 3.729e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.618e0

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

DP
type: SiteQuality
SIO_000300: 1.503846e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.630736114281987e-5
allele num: 61322
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 8.52e0

MQRankSum
type: SiteQuality
SIO_000300: -9.54e-1

BaseQRankSum
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SIO_000300: -3.481e0

FS
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SIO_000300: 2.574e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

DP
type: SiteQuality
SIO_000300: 1.503437e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.121e-1

GenotypeDepth
all individuals: 2273
bin: 3.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.228803145736053e-4
allele num: 8138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16196
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61354
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
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SIO_000300: 1.016e1

DP
type: SiteQuality
SIO_000300: 1.504413e6

BaseQRankSum
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SIO_000300: -2.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.143e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeDepth
all individuals: 55
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 8.75e1
variant carriers: 0