22-38525510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525510
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525510
    reference: chr 22
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1137G>A
  hgvsp: ENST00000332509.3:c.1137G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1137G>A
  hgvsp: ENST00000402064.1:c.1137G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.107G>A
  hgvsp: ENST00000452794.1:c.107G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1137G>A
  hgvsp: ENST00000335539.3:c.1137G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.318G>A
  hgvsp: ENST00000448094.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.551G>A
  hgvsp: ENST00000427114.1:c.551G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000480154
  gene symbol: PLA2G6
  hgvsc: ENST00000480154.1:n.4G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-2976G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19093
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2131
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro379Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

22-38525511-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525511
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525511
    reference: chr 22
allele count: 5
allele frequency: 4.122487343963854e-5
allele num: 121286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.106C>T
  hgvsp: ENSP00000392968.1:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000480154
  gene symbol: PLA2G6
  hgvsc: ENST00000480154.1:n.3C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.550C>T
  hgvsp: ENSP00000407743.1:p.Pro184Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1136C>T
  hgvsp: ENSP00000386100.1:p.Pro379Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1136C>T
  hgvsp: ENSP00000335149.3:p.Pro379Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.317C>T
  hgvsp: ENSP00000407106.1:p.Pro106Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1136C>T
  hgvsp: ENSP00000333142.3:p.Pro379Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-2977C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro379Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

22-38525514-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525514
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525514
    reference: chr 22
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1133C>T
  hgvsp: ENSP00000335149.3:p.Thr378Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.547C>T
  hgvsp: ENSP00000407743.1:p.Thr183Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.314C>T
  hgvsp: ENSP00000407106.1:p.Thr105Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.103C>T
  hgvsp: ENSP00000392968.1:p.Thr35Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1133C>T
  hgvsp: ENSP00000386100.1:p.Thr378Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1133C>T
  hgvsp: ENSP00000333142.3:p.Thr378Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-2980C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36357
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr378Ile
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

22-38525517-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525517
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525517
    reference: chr 22
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1130A>G
  hgvsp: ENSP00000333142.3:p.Asp377Gly
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1130A>G
  hgvsp: ENSP00000386100.1:p.Asp377Gly
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-2983A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.100A>G
  hgvsp: ENSP00000392968.1:p.Asp34Gly
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.311A>G
  hgvsp: ENSP00000407106.1:p.Asp104Gly
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.544A>G
  hgvsp: ENSP00000407743.1:p.Asp182Gly
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1130A>G
  hgvsp: ENSP00000335149.3:p.Asp377Gly
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36356
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp377Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

22-38525521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525521
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525521
    reference: chr 22
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.307G>A
  hgvsp: ENSP00000407106.1:p.Val103Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1126G>A
  hgvsp: ENSP00000333142.3:p.Val376Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1126G>A
  hgvsp: ENSP00000386100.1:p.Val376Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1126G>A
  hgvsp: ENSP00000335149.3:p.Val376Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-2987G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.540G>A
  hgvsp: ENSP00000407743.1:p.Val181Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.96G>A
  hgvsp: ENSP00000392968.1:p.Val33Met
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9776
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val376Met
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

22-38525527-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525527
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525527
    reference: chr 22
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.301G>A
  hgvsp: ENSP00000407106.1:p.Ala101Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1120G>A
  hgvsp: ENSP00000335149.3:p.Ala374Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.534G>A
  hgvsp: ENSP00000407743.1:p.Ala179Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1120G>A
  hgvsp: ENSP00000333142.3:p.Ala374Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.*24G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.90G>A
  hgvsp: ENSP00000392968.1:p.Ala31Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1120G>A
  hgvsp: ENSP00000386100.1:p.Ala374Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-2993G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36352
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala374Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD

22-38525531-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525531
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525531
    reference: chr 22
allele count: 25
allele frequency: 2.061515626288447e-4
allele num: 121270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.*20C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1116C>T
  hgvsp: ENST00000335539.3:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.297C>T
  hgvsp: ENST00000448094.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1116C>T
  hgvsp: ENST00000332509.3:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1116C>T
  hgvsp: ENST00000402064.1:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-2997C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.86C>T
  hgvsp: ENST00000452794.1:c.86C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.530C>T
  hgvsp: ENST00000427114.1:c.530C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe372Phe
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS

22-38525536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525536
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525536
    reference: chr 22
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1111G>A
  hgvsp: ENSP00000386100.1:p.Val371Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.292G>A
  hgvsp: ENSP00000407106.1:p.Val98Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.*15G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.525G>A
  hgvsp: ENSP00000407743.1:p.Val176Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.81G>A
  hgvsp: ENSP00000392968.1:p.Val28Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1111G>A
  hgvsp: ENSP00000333142.3:p.Val371Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3002G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1111G>A
  hgvsp: ENSP00000335149.3:p.Val371Met
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val371Met
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

22-38525537-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525537
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525537
    reference: chr 22
allele count: 3
allele frequency: 2.473981956424931e-5
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.524C>T
  hgvsp: ENST00000427114.1:c.524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.291C>T
  hgvsp: ENST00000448094.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1110C>T
  hgvsp: ENST00000402064.1:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1110C>T
  hgvsp: ENST00000332509.3:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1110C>T
  hgvsp: ENST00000335539.3:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.80C>T
  hgvsp: ENST00000452794.1:c.80C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3003C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile370Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

22-38525539-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525539
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525539
    reference: chr 22
allele count: 2
allele frequency: 1.649402916144356e-5
allele num: 121256
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1108A>G
  hgvsp: ENSP00000333142.3:p.Ile370Val
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3005A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.78A>G
  hgvsp: ENSP00000392968.1:p.Ile27Val
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.522A>G
  hgvsp: ENSP00000407743.1:p.Ile175Val
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.289A>G
  hgvsp: ENSP00000407106.1:p.Ile97Val
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1108A>G
  hgvsp: ENSP00000335149.3:p.Ile370Val
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1108A>G
  hgvsp: ENSP00000386100.1:p.Ile370Val
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.*12A>G
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9775
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ile370Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

22-38525548-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525548
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525548
    reference: chr 22
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.*3A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1099A>G
  hgvsp: ENSP00000335149.3:p.Lys367Glu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3014A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.69A>G
  hgvsp: ENSP00000392968.1:p.Lys24Glu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1099A>G
  hgvsp: ENSP00000386100.1:p.Lys367Glu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.280A>G
  hgvsp: ENSP00000407106.1:p.Lys94Glu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1099A>G
  hgvsp: ENSP00000333142.3:p.Lys367Glu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.513A>G
  hgvsp: ENSP00000407743.1:p.Lys172Glu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.591A>G
  hgvsp: ENST00000452542.1:c.591A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7183
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys367Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

22-38525550-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525550
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525550
    reference: chr 22
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.67T>A
  hgvsp: ENSP00000392968.1:p.Ile23Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.278T>A
  hgvsp: ENSP00000407106.1:p.Ile93Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.511T>A
  hgvsp: ENSP00000407743.1:p.Ile171Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1097T>A
  hgvsp: ENSP00000386100.1:p.Ile366Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3016T>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.*1T>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1097T>A
  hgvsp: ENSP00000335149.3:p.Ile366Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.589T>A
  hgvsp: ENSP00000412629.1:p.Ile197Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1097T>A
  hgvsp: ENSP00000333142.3:p.Ile366Asn
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile366Asn
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-38525552-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525552
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525552
    reference: chr 22
allele count: 2
allele frequency: 1.649892756970797e-5
allele num: 121220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.509G>T
  hgvsp: ENSP00000407743.1:p.Met170Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1095G>T
  hgvsp: ENSP00000386100.1:p.Met365Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.276G>T
  hgvsp: ENSP00000407106.1:p.Met92Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3018G>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1095G>T
  hgvsp: ENSP00000333142.3:p.Met365Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.587G>T
  hgvsp: ENSP00000412629.1:p.Met196Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.472G>T
  hgvsp: ENSP00000408298.1:p.Ter158LeuextTer?
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.65G>T
  hgvsp: ENSP00000392968.1:p.Met22Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1095G>T
  hgvsp: ENSP00000335149.3:p.Met365Ile
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ter158LeuextTer?
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

22-38525560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525560
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525560
    reference: chr 22
allele count: 2
allele frequency: 1.650628063978344e-5
allele num: 121166
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1087G>A
  hgvsp: ENSP00000333142.3:p.Val363Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.268G>A
  hgvsp: ENSP00000407106.1:p.Val90Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1087G>A
  hgvsp: ENSP00000335149.3:p.Val363Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.579G>A
  hgvsp: ENSP00000412629.1:p.Val194Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1087G>A
  hgvsp: ENSP00000386100.1:p.Val363Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.57G>A
  hgvsp: ENSP00000392968.1:p.Val20Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3026G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.501G>A
  hgvsp: ENSP00000407743.1:p.Val168Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.464G>A
  hgvsp: ENST00000427453.1:c.464G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36224
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val363Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

22-38525561-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525561
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525561
    reference: chr 22
allele count: 2165
allele frequency: 1.786804879256557e-2
allele num: 121166
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.56C>T
  hgvsp: ENST00000452794.1:c.56C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1086C>T
  hgvsp: ENST00000332509.3:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.463C>T
  hgvsp: ENSP00000408298.1:p.Thr155Met
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3027C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.578C>T
  hgvsp: ENST00000452542.1:c.578C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1086C>T
  hgvsp: ENST00000335539.3:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.500C>T
  hgvsp: ENST00000427114.1:c.500C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.267C>T
  hgvsp: ENST00000448094.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1086C>T
  hgvsp: ENST00000402064.1:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 6.25e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 3.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 6.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 9.75e1
  variant carriers: 690
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 8.25e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.75e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 19561
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8160
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 18726
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.25e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.75e1
  variant carriers: 135
genotype quality: GenotypeQuality
  all individuals: 35701
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr155Met
num of homozygotes: 203
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

22-38525572-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525572
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525572
    reference: chr 22
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-3C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-3C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-3C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-3C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-3C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-3C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-3C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-3C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3038C>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19474
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9492
  bin: 9.75e1
  variant carriers: 1
hgvs: c.1078-3C>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

22-38525581-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525581
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525579
    reference: chr 22
allele count: 1
allele frequency: 8.269793751343841e-6
allele num: 120922
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-14_1078-13delTC
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-14_570-13delTC
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3049_413-3048delTC
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-14_1078-13delTC
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-14_455-13delTC
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-14_48-13delTC
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-14_492-13delTC
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-14_1078-13delTC
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-14_259-13delTC
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: GGA
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

22-38525584-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525584
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525584
    reference: chr 22
allele count: 1
allele frequency: 8.278556881964336e-6
allele num: 120794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-15C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-15C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-15C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-15C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3050C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-15C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-15C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-15C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-15C>G
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19242
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9493
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

22-38525585-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525585
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525585
    reference: chr 22
allele count: 1
allele frequency: 8.278282753025713e-6
allele num: 120798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-16T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-16T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-16T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-16T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-16T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-16T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3051T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-16T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-16T>C
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35629
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

22-38525589-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525589
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525589
    reference: chr 22
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-20C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3055C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-20C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-20C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-20C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-20C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-20C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-20C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-20C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7001
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

22-38525589-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525589
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525589
    reference: chr 22
allele count: 29
allele frequency: 2.403766453366931e-4
allele num: 120644
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-20C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-20C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-20C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-20C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3055C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-20C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-20C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-20C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-20C>G
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 19109
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9518
  bin: 9.75e1
  variant carriers: 29
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

22-38525590-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525590
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525590
    reference: chr 22
allele count: 3
allele frequency: 2.486778626966628e-5
allele num: 120638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-21T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-21T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-21T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-21T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-21T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-21T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3056T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-21T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-21T>C
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9493
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

22-38525596-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525596
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525596
    reference: chr 22
allele count: 17
allele frequency: 1.413110338980233e-4
allele num: 120302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-27G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-27G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-27G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-27G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3062G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-27G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-27G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-27G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-27G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8423
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18141
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15877
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9501
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

22-38525597-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525597
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525597
    reference: chr 22
allele count: 1
allele frequency: 8.313657676831499e-6
allele num: 120284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-28C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-28C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3063C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-28C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-28C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-28C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-28C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-28C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-28C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-38525601-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525601
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525601
    reference: chr 22
allele count: 1
allele frequency: 8.326949338840222e-6
allele num: 120092
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-32T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-32T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-32T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-32T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-32T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-32T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-32T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3067T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-32T>C
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7915
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6251
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2273
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9486
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/22-38525602-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525602
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525602
    reference: chr 22
allele count: 1
allele frequency: 8.333194446759221e-6
allele num: 120002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-33T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-33T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-33T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-33T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-33T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3068T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-33T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-33T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-33T>G
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9485
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

22-38525607-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525607
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525607
    reference: chr 22
allele count: 13
allele frequency: 1.087483896873065e-4
allele num: 119542
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-38G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-38G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-38G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-38G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3073G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-38G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-38G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-38G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-38G>C
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11375
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15030
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9496
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

22-38525607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525607
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525607
    reference: chr 22
allele count: 5
allele frequency: 4.182630372588714e-5
allele num: 119542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-38G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-38G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-38G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-38G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-38G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3073G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-38G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-38G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-38G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15030
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5650
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

22-38525608-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525608
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525608
    reference: chr 22
allele count: 3
allele frequency: 2.513320599175631e-5
allele num: 119364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-39C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-39C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-39C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-39C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-39C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-39C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-39C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3074C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-39C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6909
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9550
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21014
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

22-38525611-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38525611
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38525611
    reference: chr 22
allele count: 1
allele frequency: 8.400961069946402e-6
allele num: 119034
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1078-42C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1078-42C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.259-42C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-3077C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.570-42C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1078-42C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.48-42C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.455-42C>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.492-42C>G
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13101
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10911
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2815
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5214
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

22-38527947-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38527947
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38527947
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 12
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+891G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+891G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.454+50G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+891G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5413G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+891G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+891G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+891G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+891G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1732
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3671
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-38527993-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38527993
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38527993
    reference: chr 22
allele count: 1
allele frequency: 4.201680672268907e-3
allele num: 238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+845C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+845C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.454+4C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+845C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+845C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+845C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+845C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+845C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5459C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4401
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
hgvs: c.454+4C>T
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/22-38528024-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528024
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528024
    reference: chr 22
allele count: 1
allele frequency: 7.407407407407407e-4
allele num: 1350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+814T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5490T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+814T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+814T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+814T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+814T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.427T>G
  hgvsp: ENSP00000408298.1:p.Leu143Arg
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+814T>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+814T>G
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu143Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

22-38528054-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528054
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528054
    reference: chr 22
allele count: 4
allele frequency: 1.2531328320802e-3
allele num: 3192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+784C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+784C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+784C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+784C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5520C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+784C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+784C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.397C>T
  hgvsp: ENSP00000408298.1:p.Pro133Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+784C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro133Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

22-38528077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528077
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528077
    reference: chr 22
allele count: 1
allele frequency: 1.764290755116443e-4
allele num: 5668
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+761C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+761C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.374C>T
  hgvsp: ENST00000427453.1:c.374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+761C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+761C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+761C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+761C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+761C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5543C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg125Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

22-38528079-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528079
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528079
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 6248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+759C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+759C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+759C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.372C>T
  hgvsp: ENSP00000408298.1:p.Arg125Cys
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5545C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+759C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+759C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+759C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+759C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg125Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

22-38528084-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528084
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528084
    reference: chr 22
allele count: 7
allele frequency: 9.612743751716561e-4
allele num: 7282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+754A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+754A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+754A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+754A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+754A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5550A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+754A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+754A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.367A>G
  hgvsp: ENSP00000408298.1:p.Gln123Arg
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Gln123Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

22-38528096-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528096
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528096
    reference: chr 22
allele count: 1
allele frequency: 1.121830827911151e-4
allele num: 8914
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+742A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+742A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+742A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.355A>G
  hgvsp: ENSP00000408298.1:p.Gln119Arg
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+742A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+742A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+742A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5562A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+742A>G
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1659
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln119Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

22-38528097-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528097
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528097
    reference: chr 22
allele count: 55
allele frequency: 6.109753388135969e-3
allele num: 9002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+741C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.354C>T
  hgvsp: ENSP00000408298.1:p.Gln119Ter
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+741C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+741C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+741C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+741C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+741C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5563C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+741C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln119Ter
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

22-38528100-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528100
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528100
    reference: chr 22
allele count: 9
allele frequency: 9.831767533318768e-4
allele num: 9154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+738G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.351G>A
  hgvsp: ENSP00000408298.1:p.Ala118Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+738G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+738G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+738G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+738G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5566G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+738G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+738G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2977
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala118Thr
num of homozygotes: 1
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

22-38528122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528122
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528122
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 9988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+716C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5588C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.333-4C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+716C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+716C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+716C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+716C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+716C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+716C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
hgvs: c.333-4C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-38528152-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528152
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528152
    reference: chr 22
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+686A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+686A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+686A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5618A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+686A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+686A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.333-34A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+686A>G
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+686A>G
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

22-38528167-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528167
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528167
    reference: chr 22
allele count: 2
allele frequency: 1.935733643050716e-4
allele num: 10332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+671G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+671G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5633G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.333-49G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+671G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+671G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+671G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+671G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+671G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

22-38528168-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528168
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528168
    reference: chr 22
allele count: 2
allele frequency: 1.935359009096187e-4
allele num: 10334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+670C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+670C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+670C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+670C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+670C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+670C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+670C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-5634C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.333-50C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2552
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

22-38528787-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528787
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528787
    reference: chr 22
allele count: 1
allele frequency: 6.560818790185015e-5
allele num: 15242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+51G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+51G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+51G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+51G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+51G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6253G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+51G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+51G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+51G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-38528800-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528800
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528800
    reference: chr 22
allele count: 3
allele frequency: 1.962836953677048e-4
allele num: 15284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+38C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+38C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+38C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+38C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+38C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6266C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+38C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+38C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+38C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2754
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-38528802-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528802
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528802
    reference: chr 22
allele count: 1
allele frequency: 6.529972574115189e-5
allele num: 15314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+36C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+36C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+36C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+36C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+36C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+36C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6268C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+36C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+36C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27649
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

22-38528802-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528802
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528802
    reference: chr 22
allele count: 1
allele frequency: 6.529972574115189e-5
allele num: 15314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+36C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6268C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+36C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+36C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+36C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+36C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+36C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+36C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+36C>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2741
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27649
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

22-38528803-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528803
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528803
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 15340
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+35C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6269C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+35C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+35C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+35C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+35C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+35C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+35C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+35C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35190
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

22-38528822-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528822
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528822
    reference: chr 22
allele count: 2
allele frequency: 1.2465719272002e-4
allele num: 16044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+16C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+16C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6288C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+16C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+16C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+16C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+16C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+16C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+16C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35883
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2684
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

22-38528824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528824
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528824
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 16260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+14C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+14C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6290C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+14C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+14C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+14C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+14C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+14C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+14C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7834
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6789
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

22-38528830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528830
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528830
    reference: chr 22
allele count: 1
allele frequency: 6.04814322003145e-5
allele num: 16534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+8C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+8C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+8C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+8C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+8C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+8C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+8C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+8C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6296C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 35305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7772
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1077+8C>T
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

22-38528833-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528833
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528833
    reference: chr 22
allele count: 1
allele frequency: 5.992329817833173e-5
allele num: 16688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.258+5G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1077+5G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.569+5G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6299G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.47+5G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1077+5G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1077+5G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.491+5G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.332+5G>A
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9522
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 1
hgvs: c.1077+5G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

22-38528839-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528839
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528839
    reference: chr 22
allele count: 1
allele frequency: 5.882352941176471e-5
allele num: 17000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.46C>T
  hgvsp: ENSP00000392968.1:p.Ser16Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.568C>T
  hgvsp: ENSP00000412629.1:p.Ser190Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1076C>T
  hgvsp: ENSP00000335149.3:p.Ser359Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.490C>T
  hgvsp: ENSP00000407743.1:p.Ser164Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6305C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1076C>T
  hgvsp: ENSP00000386100.1:p.Ser359Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.331C>T
  hgvsp: ENSP00000408298.1:p.Ser111Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.257C>T
  hgvsp: ENSP00000407106.1:p.Ser86Leu
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1076C>T
  hgvsp: ENSP00000333142.3:p.Ser359Leu
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser359Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

22-38528850-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528850
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528850
    reference: chr 22
allele count: 1
allele frequency: 5.72737686139748e-5
allele num: 17460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.557C>T
  hgvsp: ENST00000452542.1:c.557C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.479C>T
  hgvsp: ENST00000427114.1:c.479C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1065C>T
  hgvsp: ENST00000332509.3:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1065C>T
  hgvsp: ENST00000335539.3:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.35C>T
  hgvsp: ENST00000452794.1:c.35C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.320C>T
  hgvsp: ENST00000427453.1:c.320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1065C>T
  hgvsp: ENST00000402064.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.246C>T
  hgvsp: ENST00000448094.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6316C>T
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31669
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His355His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

22-38528852-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528852
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528852
    reference: chr 22
allele count: 1
allele frequency: 5.699304684828451e-5
allele num: 17546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.477C>T
  hgvsp: ENSP00000407743.1:p.His160Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1063C>T
  hgvsp: ENSP00000333142.3:p.His355Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.318C>T
  hgvsp: ENSP00000408298.1:p.His107Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1063C>T
  hgvsp: ENSP00000335149.3:p.His355Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.33C>T
  hgvsp: ENSP00000392968.1:p.His12Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6318C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.555C>T
  hgvsp: ENSP00000412629.1:p.His186Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1063C>T
  hgvsp: ENSP00000386100.1:p.His355Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.244C>T
  hgvsp: ENSP00000407106.1:p.His82Tyr
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33613
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His355Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

22-38528856-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528856
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528856
    reference: chr 22
allele count: 5
allele frequency: 2.830295482848409e-4
allele num: 17666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.314G>A
  hgvsp: ENST00000427453.1:c.314G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1059G>A
  hgvsp: ENST00000335539.3:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.473G>A
  hgvsp: ENST00000427114.1:c.473G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.29G>A
  hgvsp: ENST00000452794.1:c.29G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1059G>A
  hgvsp: ENST00000402064.1:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6322G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.240G>A
  hgvsp: ENST00000448094.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1059G>A
  hgvsp: ENST00000332509.3:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.551G>A
  hgvsp: ENST00000452542.1:c.551G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12968
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro353Pro
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

22-38528860-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528860
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528860
    reference: chr 22
allele count: 1
allele frequency: 5.550621669626998e-5
allele num: 18016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.25C>T
  hgvsp: ENSP00000392968.1:p.Thr9Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.236C>T
  hgvsp: ENSP00000407106.1:p.Thr79Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.547C>T
  hgvsp: ENSP00000412629.1:p.Thr183Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.469C>T
  hgvsp: ENSP00000407743.1:p.Thr157Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1055C>T
  hgvsp: ENSP00000386100.1:p.Thr352Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1055C>T
  hgvsp: ENSP00000335149.3:p.Thr352Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6326C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1055C>T
  hgvsp: ENSP00000333142.3:p.Thr352Ile
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.310C>T
  hgvsp: ENSP00000408298.1:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr352Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

22-38528865-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528865
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528865
    reference: chr 22
allele count: 1
allele frequency: 5.489076737292787e-5
allele num: 18218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6331C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.20C>T
  hgvsp: ENST00000452794.1:c.20C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1050C>T
  hgvsp: ENST00000402064.1:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.305C>T
  hgvsp: ENST00000427453.1:c.305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.464C>T
  hgvsp: ENST00000427114.1:c.464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1050C>T
  hgvsp: ENST00000335539.3:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1050C>T
  hgvsp: ENST00000332509.3:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.542C>T
  hgvsp: ENST00000452542.1:c.542C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.231C>T
  hgvsp: ENST00000448094.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14074
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly350Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

22-38528877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528877
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528877
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 18710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1038C>T
  hgvsp: ENST00000402064.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.8C>T
  hgvsp: ENST00000452794.1:c.8C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.219C>T
  hgvsp: ENST00000448094.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.293C>T
  hgvsp: ENST00000427453.1:c.293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6343C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1038C>T
  hgvsp: ENST00000332509.3:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1038C>T
  hgvsp: ENST00000335539.3:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.530C>T
  hgvsp: ENST00000452542.1:c.530C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.452C>T
  hgvsp: ENST00000427114.1:c.452C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14714
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31922
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2610
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg346Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

22-38528878-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528878
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528878
    reference: chr 22
allele count: 1
allele frequency: 5.327650506126798e-5
allele num: 18770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.292G>A
  hgvsp: ENSP00000408298.1:p.Arg98His
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.451G>A
  hgvsp: ENSP00000407743.1:p.Arg151His
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.529G>A
  hgvsp: ENSP00000412629.1:p.Arg177His
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1037G>A
  hgvsp: ENSP00000386100.1:p.Arg346His
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.7G>A
  hgvsp: ENSP00000392968.1:p.Arg3His
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1037G>A
  hgvsp: ENSP00000335149.3:p.Arg346His
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1037G>A
  hgvsp: ENSP00000333142.3:p.Arg346His
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6344G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.218G>A
  hgvsp: ENSP00000407106.1:p.Arg73His
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31790
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29943
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg346His
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

22-38528879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528879
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528879
    reference: chr 22
allele count: 3
allele frequency: 1.580777742649384e-4
allele num: 18978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.217C>T
  hgvsp: ENSP00000407106.1:p.Arg73Cys
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.291C>T
  hgvsp: ENSP00000408298.1:p.Arg98Cys
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1036C>T
  hgvsp: ENSP00000386100.1:p.Arg346Cys
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1036C>T
  hgvsp: ENSP00000335149.3:p.Arg346Cys
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.528C>T
  hgvsp: ENSP00000412629.1:p.Arg177Cys
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000392968
  ensembl transcript: ENST00000452794
  gene symbol: PLA2G6
  hgvsc: ENST00000452794.1:c.6C>T
  hgvsp: ENSP00000392968.1:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1036C>T
  hgvsp: ENSP00000333142.3:p.Arg346Cys
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6345C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.450C>T
  hgvsp: ENSP00000407743.1:p.Arg151Cys
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg346Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

22-38528888-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528888
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528888
    reference: chr 22
allele count: 362
allele frequency: 1.84958103413039e-2
allele num: 19572
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.441G>A
  hgvsp: ENSP00000407743.1:p.Ala148Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6354G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.282G>A
  hgvsp: ENSP00000408298.1:p.Ala95Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1027G>A
  hgvsp: ENSP00000386100.1:p.Ala343Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.208G>A
  hgvsp: ENSP00000407106.1:p.Ala70Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1027G>A
  hgvsp: ENSP00000333142.3:p.Ala343Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.519G>A
  hgvsp: ENSP00000412629.1:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1027G>A
  hgvsp: ENSP00000335149.3:p.Ala343Thr
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 1.25e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 15561
  bin: 7.5e0
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 31003
  bin: 2.5e0
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 7.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 11
hgvs: p.Ala343Thr
num of homozygotes: 6
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

22-38528894-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528894
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528894
    reference: chr 22
allele count: 1
allele frequency: 5.028663381273258e-5
allele num: 19886
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.513G>C
  hgvsp: ENSP00000412629.1:p.Ala172Pro
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1021G>C
  hgvsp: ENSP00000333142.3:p.Ala341Pro
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.435G>C
  hgvsp: ENSP00000407743.1:p.Ala146Pro
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.202G>C
  hgvsp: ENSP00000407106.1:p.Ala68Pro
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1021G>C
  hgvsp: ENSP00000335149.3:p.Ala341Pro
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.276G>C
  hgvsp: ENSP00000408298.1:p.Ala93Pro
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6360G>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1021G>C
  hgvsp: ENSP00000386100.1:p.Ala341Pro
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30676
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28823
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala341Pro
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

22-38528911-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528911
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528911
    reference: chr 22
allele count: 2
allele frequency: 9.641342074816814e-5
allele num: 20744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.1004T>C
  hgvsp: ENSP00000335149.3:p.Val335Ala
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.496T>C
  hgvsp: ENSP00000412629.1:p.Val166Ala
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.259T>C
  hgvsp: ENSP00000408298.1:p.Val87Ala
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.1004T>C
  hgvsp: ENSP00000333142.3:p.Val335Ala
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6377T>C
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.185T>C
  hgvsp: ENSP00000407106.1:p.Val62Ala
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.1004T>C
  hgvsp: ENSP00000386100.1:p.Val335Ala
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.418T>C
  hgvsp: ENSP00000407743.1:p.Val140Ala
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val335Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

22-38528917-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528917
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528917
    reference: chr 22
allele count: 1
allele frequency: 4.78102887741442e-5
allele num: 20916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.490C>A
  hgvsp: ENSP00000412629.1:p.Ala164Asp
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.998C>A
  hgvsp: ENSP00000335149.3:p.Ala333Asp
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.253C>A
  hgvsp: ENSP00000408298.1:p.Ala85Asp
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6383C>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.998C>A
  hgvsp: ENSP00000333142.3:p.Ala333Asp
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.412C>A
  hgvsp: ENSP00000407743.1:p.Ala138Asp
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.998C>A
  hgvsp: ENSP00000386100.1:p.Ala333Asp
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.179C>A
  hgvsp: ENSP00000407106.1:p.Ala60Asp
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28694
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13573
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5652
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala333Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

22-38528920-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528920
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528920
    reference: chr 22
allele count: 3
allele frequency: 1.426533523537803e-4
allele num: 21030
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.995G>C
  hgvsp: ENSP00000335149.3:p.Cys332Ser
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.250G>C
  hgvsp: ENSP00000408298.1:p.Cys84Ser
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.995G>C
  hgvsp: ENSP00000386100.1:p.Cys332Ser
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.409G>C
  hgvsp: ENSP00000407743.1:p.Cys137Ser
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.487G>C
  hgvsp: ENSP00000412629.1:p.Cys163Ser
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.176G>C
  hgvsp: ENSP00000407106.1:p.Cys59Ser
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.995G>C
  hgvsp: ENSP00000333142.3:p.Cys332Ser
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6386G>C
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19015
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Cys332Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/22-38528924-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528924
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528924
    reference: chr 22
allele count: 1
allele frequency: 4.7523999619808e-5
allele num: 21042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.405G>T
  hgvsp: ENSP00000407743.1:p.Asp136Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.172G>T
  hgvsp: ENSP00000407106.1:p.Asp58Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.991G>T
  hgvsp: ENSP00000335149.3:p.Asp331Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.246G>T
  hgvsp: ENSP00000408298.1:p.Asp83Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.991G>T
  hgvsp: ENSP00000333142.3:p.Asp331Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6390G>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.991G>T
  hgvsp: ENSP00000386100.1:p.Asp331Tyr
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.483G>T
  hgvsp: ENSP00000412629.1:p.Asp162Tyr
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19481
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13787
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Asp331Tyr
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-38528924-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528924
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528924
    reference: chr 22
allele count: 1
allele frequency: 4.7523999619808e-5
allele num: 21042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.991G>A
  hgvsp: ENSP00000335149.3:p.Asp331Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6390G>A
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.991G>A
  hgvsp: ENSP00000333142.3:p.Asp331Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.246G>A
  hgvsp: ENSP00000408298.1:p.Asp83Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.172G>A
  hgvsp: ENSP00000407106.1:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.483G>A
  hgvsp: ENSP00000412629.1:p.Asp162Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.991G>A
  hgvsp: ENSP00000386100.1:p.Asp331Asn
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.405G>A
  hgvsp: ENSP00000407743.1:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19481
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5589
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp331Asn
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

22-38528925-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38528925
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 38528925
    reference: chr 22
allele count: 48
allele frequency: 2.260099821075431e-3
allele num: 21238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000335149
  ensembl transcript: ENST00000335539
  gene symbol: PLA2G6
  hgvsc: ENST00000335539.3:c.990C>T
  hgvsp: ENST00000335539.3:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407106
  ensembl transcript: ENST00000448094
  gene symbol: PLA2G6
  hgvsc: ENST00000448094.1:c.171C>T
  hgvsp: ENST00000448094.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000386100
  ensembl transcript: ENST00000402064
  gene symbol: PLA2G6
  hgvsc: ENST00000402064.1:c.990C>T
  hgvsp: ENST00000402064.1:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000333142
  ensembl transcript: ENST00000332509
  gene symbol: PLA2G6
  hgvsc: ENST00000332509.3:c.990C>T
  hgvsp: ENST00000332509.3:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184381
  ensembl transcript: ENST00000471636
  gene symbol: PLA2G6
  hgvsc: ENST00000471636.1:n.413-6391C>T
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000408298
  ensembl transcript: ENST00000427453
  gene symbol: PLA2G6
  hgvsc: ENST00000427453.1:c.245C>T
  hgvsp: ENST00000427453.1:c.245C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000407743
  ensembl transcript: ENST00000427114
  gene symbol: PLA2G6
  hgvsc: ENST00000427114.1:c.404C>T
  hgvsp: ENST00000427114.1:c.404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184381
  ensembl protein: ENSP00000412629
  ensembl transcript: ENST00000452542
  gene symbol: PLA2G6
  hgvsc: ENST00000452542.1:c.482C>T
  hgvsp: ENST00000452542.1:c.482C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9039
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27489
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20026
  bin: 7.5e0
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2986
  bin: 1.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 8.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.75e1
  variant carriers: 2
hgvs: p.Phe330Phe
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
reference allele: G

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9776
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2298
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7191
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36346
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.876e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.64e-1

DP
type: SiteQuality
SIO_000300: 2.109573e6

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

QD
type: SiteQuality
SIO_000300: 2.371e1

FS
type: SiteQuality
SIO_000300: 8.129999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.82e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36342
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7191
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9776
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 5.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

DP
type: SiteQuality
SIO_000300: 2.110259e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.314e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9775
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7195
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.122e0

MQRankSum
type: SiteQuality
SIO_000300: -2.225e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.128e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: -1.611e0

DP
type: SiteQuality
SIO_000300: 2.109864e6

GenotypeQuality
all individuals: 1469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9776
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7192
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.272e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.67e-1

DP
type: SiteQuality
SIO_000300: 2.109786e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7190
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36359
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 1.037e0

VQSLOD
type: SiteQuality
SIO_000300: -3.385e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 2.109801e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.636e0

MQ
type: SiteQuality
SIO_000300: 5.902e1

QD
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7189
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9777
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.087e0

DP
type: SiteQuality
SIO_000300: 2.109713e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e-1

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
all individuals: 9798
bin: 9.75e1
variant carriers: 25

GenotypeQuality
all individuals: 89
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7189
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36332
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2127
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

Latino
type: Population
allele count: 24
allele frequency: 2.073971655720705e-3
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.152e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.92e-1

DP
type: SiteQuality
SIO_000300: 2.11126e6

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7192
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9775
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 628
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.013e1

FS
type: SiteQuality
SIO_000300: 1.7207e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.556e0

MQRankSum
type: SiteQuality
SIO_000300: 3.95e0

VQSLOD
type: SiteQuality
SIO_000300: -7.341e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

MQ
type: SiteQuality
SIO_000300: 5.811e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e0

DP
type: SiteQuality
SIO_000300: 2.109655e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

FS
type: SiteQuality
SIO_000300: 3.409e0

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.411e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.11e-1

DP
type: SiteQuality
SIO_000300: 2.109769e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.393e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.451e0

DP
type: SiteQuality
SIO_000300: 2.109659e6

VQSLOD
type: SiteQuality
SIO_000300: 9.12e-1

QD
type: SiteQuality
SIO_000300: 1.136e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.59e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.109357e6

FS
type: SiteQuality
SIO_000300: 9.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.9e0

MQRankSum
type: SiteQuality
SIO_000300: -2.52e-1

DP
type: SiteQuality
SIO_000300: 2.109357e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.88e-1

FS
type: SiteQuality
SIO_000300: 6.182e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.992e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.019e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.304e0

QD
type: SiteQuality
SIO_000300: 1.239e1

MQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

DP
type: SiteQuality
SIO_000300: 2.109212e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.166e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 2120
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 9780
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005801196308876e-5
allele num: 66538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

FS
type: SiteQuality
SIO_000300: 2.786e0

DP
type: SiteQuality
SIO_000300: 2.108468e6

QD
type: SiteQuality
SIO_000300: 1.211e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1942
allele frequency: 1.868745188606621e-1
allele num: 10392
num of homozygotes: 203

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 99
allele frequency: 8.562532433834976e-3
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.216814159292035e-2
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 109
allele frequency: 1.638161651988337e-3
allele num: 66538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.216537e6

QD
type: SiteQuality
SIO_000300: 1.534e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.645e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.166e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.348e0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-2

DP
type: SiteQuality
SIO_000300: 2.093594e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.388e1

GenotypeQuality
all individuals: 1415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2190
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
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GenotypeQuality
all individuals: 7190
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36149
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9493
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.08986e6

QD
type: SiteQuality
SIO_000300: 1.424e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.491e0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.12e-1

MQ
type: SiteQuality
SIO_000300: 6.073e1

GenotypeQuality
all individuals: 204
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35554
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.084037e6

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 203
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2173
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9492
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variant carriers: 1

GenotypeQuality
all individuals: 2008
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.66e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.36e-1

DP
type: SiteQuality
SIO_000300: 2.083786e6

FS
type: SiteQuality
SIO_000300: 2.112e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.210000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.71e-1

GenotypeQuality
all individuals: 2162
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
all individuals: 394
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variant carriers: 0

GenotypeQuality
all individuals: 1406
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variant carriers: 0

GenotypeQuality
all individuals: 263
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variant carriers: 0

GenotypeQuality
all individuals: 575
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variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
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variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509798592867711e-5
allele num: 66234
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-2

QD
type: SiteQuality
SIO_000300: 1.405e1

FS
type: SiteQuality
SIO_000300: 1.639e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-1

DP
type: SiteQuality
SIO_000300: 2.076778e6

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2162
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1406
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
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variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7001
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variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34627
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variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 29
allele frequency: 3.363488749710044e-3
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66234
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

FS
type: SiteQuality
SIO_000300: 1.639e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 2.076778e6

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 3.25e1
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GenotypeQuality
all individuals: 7010
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
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variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66232
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.478664192949907e-4
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e0

MQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

QD
type: SiteQuality
SIO_000300: 1.512e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 2.076022e6

GenotypeQuality
all individuals: 2342
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 782
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 850
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GenotypeQuality
all individuals: 2141
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GenotypeQuality
all individuals: 1399
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
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GenotypeQuality
all individuals: 179
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GenotypeQuality
all individuals: 1218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.272658404290779e-4
allele num: 66002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.524855138761818e-4
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.33e1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.042028e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
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variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
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GenotypeQuality
all individuals: 32
bin: 1.75e1
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GenotypeQuality
all individuals: 144
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GenotypeQuality
all individuals: 791
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GenotypeQuality
all individuals: 1222
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 31657
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GenotypeQuality
all individuals: 2132
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515381118351265e-5
allele num: 65990
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 7.539e0

VQSLOD
type: SiteQuality
SIO_000300: -7.451e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.116e0

DP
type: SiteQuality
SIO_000300: 2.041638e6

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.59e-1

GenotypeQuality
all individuals: 3194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 146
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GenotypeQuality
all individuals: 2101
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GenotypeQuality
all individuals: 1389
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variant carriers: 0

GenotypeQuality
all individuals: 396
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GenotypeQuality
all individuals: 27667
bin: 6.25e1
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GenotypeQuality
all individuals: 1884
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GenotypeQuality
all individuals: 241
bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8570
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.517865274278255e-5
allele num: 65882
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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ClippingRankSum
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SIO_000300: -1.046e0

FS
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MQRankSum
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SIO_000300: -1.507e0

VQSLOD
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InbreedingCoeff
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SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 2.001811e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.519018106695832e-5
allele num: 65832
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.92e-1

BaseQRankSum
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VQSLOD
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DP
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FS
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SIO_000300: 5.322e0

ClippingRankSum
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SIO_000300: 5.590000000000001e-1

QD
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MQ
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InbreedingCoeff
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SIO_000300: -8.0e-4

ReadPosRankSum
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SIO_000300: 1.14e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65554
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

East Asian
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allele count: 13
allele frequency: 1.526896875734085e-3
allele num: 8514
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.83e0

InbreedingCoeff
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SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.953209e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

QD
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MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 4
allele frequency: 3.897875657766517e-4
allele num: 10262
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65554
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

South Asian
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allele frequency: 6.0960741282614e-5
allele num: 16404
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MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

QD
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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SIO_000300: 1.953209e6

VQSLOD
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ReadPosRankSum
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SIO_000300: 2.53e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11386
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.583231483744805e-5
allele num: 65456
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.966e0

VQSLOD
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QD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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SIO_000300: 1.9461e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 1.118568232662192e-3
allele num: 894
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65250
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQRankSum
type: SiteQuality
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: NaN
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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MQ
type: SiteQuality
SIO_000300: 5.728e1

InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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allele frequency: 7.8125e-3
allele num: 128
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African
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 862
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East Asian
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Other
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

FS
type: SiteQuality
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QD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 850
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 100
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South Asian
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allele frequency: 1.901140684410646e-3
allele num: 2104
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MQRankSum
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 2.604166666666667e-4
allele num: 3840
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1472
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-2

VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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DP
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ClippingRankSum
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.405e1

MQ
type: SiteQuality
SIO_000300: 5.774e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1610
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
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SIO_000300: 8.1978e4

FS
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MQRankSum
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InbreedingCoeff
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SIO_000300: -2.9e-2

ReadPosRankSum
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ClippingRankSum
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SIO_000300: 1.16e0

QD
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MQ
type: SiteQuality
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VQSLOD
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SIO_000300: -2.101e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1862
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4984
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 4.430379746835443e-2
allele num: 158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.92e-1

QD
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.35e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.635e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2280
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 1.62813415825464e-4
allele num: 6142
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.01e-1

FS
type: SiteQuality
SIO_000300: 2.035e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.09476e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.82e-2

MQRankSum
type: SiteQuality
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QD
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VQSLOD
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SIO_000300: -2.288e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 50
allele frequency: 8.04634695848085e-3
allele num: 6214
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 1.746724890829694e-3
allele num: 2290
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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South Asian
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FS
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MQ
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MQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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Other
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MQ
type: SiteQuality
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VQSLOD
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DP
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.27682e5

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

QD
type: SiteQuality
SIO_000300: 1.007e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

FS
type: SiteQuality
SIO_000300: 4.31e0

MQ
type: SiteQuality
SIO_000300: 5.763e1

VQSLOD
type: SiteQuality
SIO_000300: -1.168e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.49e-2

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.390433815350389e-4
allele num: 7192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 7.575757575757576e-3
allele num: 132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.818e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.02e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

QD
type: SiteQuality
SIO_000300: 1.069e1

MQ
type: SiteQuality
SIO_000300: 5.807e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

DP
type: SiteQuality
SIO_000300: 1.269e5

VQSLOD
type: SiteQuality
SIO_000300: -3.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 1920
bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2608
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.782415136338342e-4
allele num: 7188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.88e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.574e0

FS
type: SiteQuality
SIO_000300: 8.169e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.86e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.96e-1

DP
type: SiteQuality
SIO_000300: 1.28079e5

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

VQSLOD
type: SiteQuality
SIO_000300: -1.182e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

GenotypeQuality
all individuals: 10719
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.387347391786903e-4
allele num: 7208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

QD
type: SiteQuality
SIO_000300: 8.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.73e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.823e-1

DP
type: SiteQuality
SIO_000300: 2.77638e5

FS
type: SiteQuality
SIO_000300: 3.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

GenotypeQuality
all individuals: 515
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6261
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 727
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27831
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 245
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.802451333813987e-4
allele num: 5548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.278772378516624e-3
allele num: 1564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7274
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

MQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -1.479e0

DP
type: SiteQuality
SIO_000300: 2.95395e5

QD
type: SiteQuality
SIO_000300: 1.517e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.08e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.413e0

GenotypeQuality
all individuals: 477
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
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variant carriers: 0

GenotypeQuality
all individuals: 2741
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variant carriers: 0

GenotypeQuality
all individuals: 1884
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variant carriers: 0

GenotypeQuality
all individuals: 295
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1055
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.803101334294987e-4
allele num: 5546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.113e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.22e-2

FS
type: SiteQuality
SIO_000300: 4.743e0

DP
type: SiteQuality
SIO_000300: 2.97849e5

MQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.335e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

GenotypeQuality
all individuals: 488
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
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variant carriers: 0

GenotypeQuality
all individuals: 333
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variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7306
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.418485237483953e-4
allele num: 1558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.335e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.22e-2

FS
type: SiteQuality
SIO_000300: 4.743e0

DP
type: SiteQuality
SIO_000300: 2.97849e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.113e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7302
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.252e1

DP
type: SiteQuality
SIO_000300: 3.00282e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.99e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.61e0

GenotypeQuality
all individuals: 339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 761
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1772
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.67379679144385e-4
allele num: 7480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5862
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.36e-2

FS
type: SiteQuality
SIO_000300: 1.2744e1

VQSLOD
type: SiteQuality
SIO_000300: -2.189e-1

DP
type: SiteQuality
SIO_000300: 3.42923e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 9.4e0

MQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 765
bin: 9.75e1
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GenotypeQuality
all individuals: 10
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1830
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.154e0

ReadPosRankSum
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -7.21e-2

DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele frequency: 0.0e0
allele num: 1884
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.317870321560359e-4
allele num: 7588
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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BaseQRankSum
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MQ
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VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.616031027795734e-4
allele num: 6188
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1912
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 320
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
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BaseQRankSum
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SIO_000300: -9.370000000000001e-1

DP
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InbreedingCoeff
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SIO_000300: -6.94e-2

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.30718954248366e-4
allele num: 7650
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.78606e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.82e-2

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.85e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.094e1

FS
type: SiteQuality
SIO_000300: 5.399e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502403846153846e-4
allele num: 6656
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 488
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7706
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.929e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.54e-2

DP
type: SiteQuality
SIO_000300: 3.93175e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

FS
type: SiteQuality
SIO_000300: 7.703e0

VQSLOD
type: SiteQuality
SIO_000300: -1.062e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.419e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.490312965722802e-4
allele num: 6710
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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MQRankSum
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QD
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DP
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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QD
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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African
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South Asian
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Other
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European (Non-Finnish)
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ReadPosRankSum
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MQ
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VQSLOD
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DP
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MQRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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African
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 7186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.069e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.455e0

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

DP
type: SiteQuality
SIO_000300: 4.15283e5

FS
type: SiteQuality
SIO_000300: 5.271e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.14e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e0

QD
type: SiteQuality
SIO_000300: 6.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.103e0

GenotypeQuality
all individuals: 477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.475e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 1.619e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.07e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.25556e5

QD
type: SiteQuality
SIO_000300: 6.94e0

GenotypeQuality
all individuals: 202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10794
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.319957761351637e-4
allele num: 7576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.04e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.951e0

DP
type: SiteQuality
SIO_000300: 4.27811e5

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

FS
type: SiteQuality
SIO_000300: 5.441e0

VQSLOD
type: SiteQuality
SIO_000300: -1.698e0

QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 29967
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.25e1
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GenotypeQuality
all individuals: 1865
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variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.853069612124326e-4
allele num: 7786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.447e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 2.185e0

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

DP
type: SiteQuality
SIO_000300: 4.30727e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.01e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 30

GenotypeQuality
all individuals: 3284
bin: 1.75e1
variant carriers: 21

GenotypeQuality
all individuals: 171
bin: 9.25e1
variant carriers: 29

GenotypeQuality
all individuals: 2162
bin: 1.25e1
variant carriers: 16

GenotypeQuality
all individuals: 180
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 4927
bin: 6.25e1
variant carriers: 27

GenotypeQuality
all individuals: 28652
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variant carriers: 18

GenotypeQuality
all individuals: 1182
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variant carriers: 33

GenotypeQuality
all individuals: 2640
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 19

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 10078
bin: 2.25e1
variant carriers: 30

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 18

GenotypeQuality
all individuals: 435
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 1100
bin: 9.75e1
variant carriers: 354

Latino
type: Population
allele count: 7
allele frequency: 1.724137931034483e-2
allele num: 406
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.263157894736842e-3
allele num: 190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.846153846153846e-2
allele num: 52
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 3.289473684210526e-3
allele num: 2432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 208
allele frequency: 2.574257425742574e-2
allele num: 8080
num of homozygotes: 4

East Asian
type: Population
allele count: 1
allele frequency: 1.677852348993289e-3
allele num: 596
num of homozygotes: 0

South Asian
type: Population
allele count: 135
allele frequency: 1.727226202661208e-2
allele num: 7816
num of homozygotes: 2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

DP
type: SiteQuality
SIO_000300: 4.50934e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.05e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.82e0

GenotypeQuality
all individuals: 5300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2776
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
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variant carriers: 0

GenotypeQuality
all individuals: 2103
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GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 11587
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variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
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GenotypeQuality
all individuals: 384
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GenotypeQuality
all individuals: 811
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 1196
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variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.208021261174197e-4
allele num: 8278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7832
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.77e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.71e0

VQSLOD
type: SiteQuality
SIO_000300: -2.197e0

DP
type: SiteQuality
SIO_000300: 4.51777e5

GenotypeQuality
all individuals: 149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1539
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 255
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variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.528445006321112e-4
allele num: 7910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2624
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.70238e5

VQSLOD
type: SiteQuality
SIO_000300: -9.888e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

FS
type: SiteQuality
SIO_000300: 4.914e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.36e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 1.319e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2981
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 811
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GenotypeQuality
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GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2664
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.263902932254803e-4
allele num: 7912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 2.645e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.32e-2

DP
type: SiteQuality
SIO_000300: 4.7518e5

VQSLOD
type: SiteQuality
SIO_000300: -1.082e0

FS
type: SiteQuality
SIO_000300: 1.2173e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.017e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 41
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GenotypeQuality
all individuals: 3351
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GenotypeQuality
all individuals: 252
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GenotypeQuality
all individuals: 5630
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GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 1223
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GenotypeQuality
all individuals: 148
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GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 13501
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 3.33555703802535e-4
allele num: 8994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.336e0

FS
type: SiteQuality
SIO_000300: 3.615e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

DP
type: SiteQuality
SIO_000300: 4.77514e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.24e-2

QD
type: SiteQuality
SIO_000300: 2.803e1

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2548
bin: 1.25e1
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GenotypeQuality
all individuals: 26417
bin: 7.5e0
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GenotypeQuality
all individuals: 455
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variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5589
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1228
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 498
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8986
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.388888888888889e-3
allele num: 720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.14e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.81795e5

QD
type: SiteQuality
SIO_000300: 1.208e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

GenotypeQuality
all individuals: 177
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3456
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26417
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1830
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13787
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.112842198976185e-4
allele num: 8986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.81795e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.14e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.208e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 169
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14839
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 26128
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 853
bin: 9.75e1
variant carriers: 44

GenotypeQuality
all individuals: 2422
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 185
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 498
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5665
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1236
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 14

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 4.607283896445809e-3
allele num: 9116
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0