19-58596700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596700
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596700
    reference: chr 19
allele count: 8
allele frequency: 8.827293993026438e-5
allele num: 90628
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1053C>T
  hgvsp: ENST00000600404.1:c.1053C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.477C>T
  hgvsp: ENST00000421612.2:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.885C>T
  hgvsp: ENST00000240727.6:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1368G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.576C>T
  hgvsp: ENST00000433686.2:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.885C>T
  hgvsp: ENST00000601144.1:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4239C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.955C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22416
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11734
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala351Ala
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

19-58596701-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596701
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596701
    reference: chr 19
allele count: 1
allele frequency: 1.10695388430118e-5
allele num: 90338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.884C>T
  hgvsp: ENSP00000468934.1:p.Ala295Val
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1052C>T
  hgvsp: ENSP00000470123.1:p.Ala351Val
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.884C>T
  hgvsp: ENSP00000240727.5:p.Ala295Val
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.954C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.476C>T
  hgvsp: ENSP00000392653.1:p.Ala159Val
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.575C>T
  hgvsp: ENSP00000412253.2:p.Ala192Val
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1369G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4238C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12345
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala351Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-58596701-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596701
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596701
    reference: chr 19
allele count: 118
allele frequency: 1.306205583475393e-3
allele num: 90338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.954C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4238C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.476C>A
  hgvsp: ENSP00000392653.1:p.Ala159Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1052C>A
  hgvsp: ENSP00000470123.1:p.Ala351Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.884C>A
  hgvsp: ENSP00000240727.5:p.Ala295Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.575C>A
  hgvsp: ENSP00000412253.2:p.Ala192Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.884C>A
  hgvsp: ENSP00000468934.1:p.Ala295Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1369G>T
  variant of: http://identifiers.org/hgnc/12919
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22407
  bin: 2.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.75e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30017
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Ala351Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

19-58596703-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596703
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596703
    reference: chr 19
allele count: 12
allele frequency: 1.334905555431953e-4
allele num: 89894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.882G>C
  hgvsp: ENSP00000468934.1:p.Glu294Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1371C>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.882G>C
  hgvsp: ENSP00000240727.5:p.Glu294Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1050G>C
  hgvsp: ENSP00000470123.1:p.Glu350Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4236G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.952G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.474G>C
  hgvsp: ENSP00000392653.1:p.Glu158Asp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.573G>C
  hgvsp: ENSP00000412253.2:p.Glu191Asp
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11476
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22297
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12895
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu350Asp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

19-58596704-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596704
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596704
    reference: chr 19
allele count: 12
allele frequency: 1.338837442820484e-4
allele num: 89630
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.881A>C
  hgvsp: ENSP00000468934.1:p.Glu294Ala
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1372T>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.473A>C
  hgvsp: ENSP00000392653.1:p.Glu158Ala
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.951A>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.572A>C
  hgvsp: ENSP00000412253.2:p.Glu191Ala
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1049A>C
  hgvsp: ENSP00000470123.1:p.Glu350Ala
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.881A>C
  hgvsp: ENSP00000240727.5:p.Glu294Ala
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4235A>C
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22097
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7541
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11394
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2474
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu350Ala
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

19-58596706-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596706
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596706
    reference: chr 19
allele count: 1
allele frequency: 1.12549240292628e-5
allele num: 88850
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1047G>A
  hgvsp: ENST00000600404.1:c.1047G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.879G>A
  hgvsp: ENST00000240727.6:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.879G>A
  hgvsp: ENST00000601144.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.949G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4233G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.570G>A
  hgvsp: ENST00000433686.2:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1374C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.471G>A
  hgvsp: ENST00000421612.2:c.471G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11062
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1444
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28974
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu349Glu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-58596718-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596718
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596718
    reference: chr 19
allele count: 2
allele frequency: 2.33912657013871e-5
allele num: 85502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.558G>T
  hgvsp: ENST00000433686.2:c.558G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.459G>T
  hgvsp: ENST00000421612.2:c.459G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4221G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1035G>T
  hgvsp: ENST00000600404.1:c.1035G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.937G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.867G>T
  hgvsp: ENST00000240727.6:c.867G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1386C>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.867G>T
  hgvsp: ENST00000601144.1:c.867G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20260
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1516
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3717
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly345Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

19-58596721-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596721
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596721
    reference: chr 19
allele count: 1
allele frequency: 1.181558239005601e-5
allele num: 84634
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.864T>C
  hgvsp: ENST00000601144.1:c.864T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1032T>C
  hgvsp: ENST00000600404.1:c.1032T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.864T>C
  hgvsp: ENST00000240727.6:c.864T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.555T>C
  hgvsp: ENST00000433686.2:c.555T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4218T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.456T>C
  hgvsp: ENST00000421612.2:c.456T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1389A>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.934T>C
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9581
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9828
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3742
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17230
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala344Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

19-58596723-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596723
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596723
    reference: chr 19
allele count: 24
allele frequency: 2.875215641173088e-4
allele num: 83472
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1030G>A
  hgvsp: ENSP00000470123.1:p.Ala344Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.862G>A
  hgvsp: ENSP00000468934.1:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.553G>A
  hgvsp: ENSP00000412253.2:p.Ala185Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1391C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.454G>A
  hgvsp: ENSP00000392653.1:p.Ala152Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.862G>A
  hgvsp: ENSP00000240727.5:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.932G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4216G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18768
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10380
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 7.75e1
  variant carriers: 2
hgvs: p.Ala344Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-58596725-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596725
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596725
    reference: chr 19
allele count: 1
allele frequency: 1.206243516441099e-5
allele num: 82902
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1393C>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.452G>C
  hgvsp: ENSP00000392653.1:p.Ser151Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1028G>C
  hgvsp: ENSP00000470123.1:p.Ser343Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.551G>C
  hgvsp: ENSP00000412253.2:p.Ser184Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4214G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.860G>C
  hgvsp: ENSP00000468934.1:p.Ser287Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.860G>C
  hgvsp: ENSP00000240727.5:p.Ser287Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.930G>C
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser343Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

19-58596731-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596731
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596731
    reference: chr 19
allele count: 1
allele frequency: 1.242977178938995e-5
allele num: 80452
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.854A>G
  hgvsp: ENSP00000240727.5:p.Gln285Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.446A>G
  hgvsp: ENSP00000392653.1:p.Gln149Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1399T>C
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.545A>G
  hgvsp: ENSP00000412253.2:p.Gln182Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4208A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1022A>G
  hgvsp: ENSP00000470123.1:p.Gln341Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.924A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.854A>G
  hgvsp: ENSP00000468934.1:p.Gln285Arg
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1764
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln341Arg
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

19-58596735-GCCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596735
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596732
    reference: chr 19
allele count: 6
allele frequency: 7.762769756249029e-5
allele num: 77292
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.439_441delAGG
  hgvsp: ENSP00000392653.1:p.Arg147del
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1406_*1408delTCC
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4201_4203delAGG
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.847_849delAGG
  hgvsp: ENSP00000468934.1:p.Arg283del
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.917_919delAGG
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.847_849delAGG
  hgvsp: ENSP00000240727.5:p.Arg283del
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.538_540delAGG
  hgvsp: ENSP00000412253.2:p.Arg180del
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1015_1017delAGG
  hgvsp: ENSP00000470123.1:p.Arg339del
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13765
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14315
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg339del
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: GCCT
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

19-58596742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596742
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596742
    reference: chr 19
allele count: 1
allele frequency: 1.354866681118578e-5
allele num: 73808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.843C>T
  hgvsp: ENST00000240727.6:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.534C>T
  hgvsp: ENST00000433686.2:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1011C>T
  hgvsp: ENST00000600404.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1410G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4197C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.435C>T
  hgvsp: ENST00000421612.2:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.913C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.843C>T
  hgvsp: ENST00000601144.1:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
hgvs: c.435C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-58596753-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596753
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596752
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 68098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-8delT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1423delA
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-11delT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-8delT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-8delT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-8delT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4185delT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-11delT
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18879
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16356
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5747
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2524
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30956
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1007-8delT
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: CA
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

19-58596759-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596759
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596759
    reference: chr 19
allele count: 1
allele frequency: 1.572772168223711e-5
allele num: 63582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-16G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1427C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4180G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-13G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-13G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-13G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-13G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-16G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17041
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7185
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-58596762-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596762
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596762
    reference: chr 19
allele count: 1
allele frequency: 1.651309488424321e-5
allele num: 60558
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-16T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1430A>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-16T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-19T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-19T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4177T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-16T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-16T>C
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 305
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4731
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8326
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

19-58596770-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596770
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596770
    reference: chr 19
allele count: 1
allele frequency: 2.076498193446572e-5
allele num: 48158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-24G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-24G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1438C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-27G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-24G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4169G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-27G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-24G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20110
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3482
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

19-58596777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596777
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596777
    reference: chr 19
allele count: 1
allele frequency: 2.678093197643278e-5
allele num: 37340
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-31C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-34C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-34C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-31C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-31C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4162C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1445G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-31C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13491
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16691
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3633
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

19-58596778-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596778
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596778
    reference: chr 19
allele count: 1
allele frequency: 2.595784446059599e-5
allele num: 38524
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-32G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-32G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4161G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-35G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-35G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-32G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1446C>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-32G>C
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21786
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16449
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24678
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

19-58596779-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596779
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596779
    reference: chr 19
allele count: 1
allele frequency: 2.653927813163482e-5
allele num: 37680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4160G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-36G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-33G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-33G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1447C>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-33G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-33G>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-36G>C
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16089
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3628
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-58596787-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596787
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596787
    reference: chr 19
allele count: 1
allele frequency: 3.274608684262231e-5
allele num: 30538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-41C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4152C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-44C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-41C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-41C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1455G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-44C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-41C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4075
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS

19-58596788-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596788
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596788
    reference: chr 19
allele count: 1
allele frequency: 3.273965426925092e-5
allele num: 30544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4151C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-42C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-45C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-42C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1456G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-45C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-42C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-42C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12883
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2992
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16688
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3858
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-58596790-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596790
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596790
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 29130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-44G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-47G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-44G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-44G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1458C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-44G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4149G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-47G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24998
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5652
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16649
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2721
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

19-58596797-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58596797
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58596797
    reference: chr 19
allele count: 15
allele frequency: 5.683109797681291e-4
allele num: 26394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.4142C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.839-51C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.434-54C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.839-51C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*1465G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.533-54C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1007-51C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.909-51C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25948
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11335
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14847
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 15917
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6512
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2928
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

19-58597493-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597493
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597493
    reference: chr 19
allele count: 1
allele frequency: 8.436113313874031e-6
allele num: 118538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.838+48T>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.433+48T>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.908+48T>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2161A>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3446T>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1006+48T>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.838+48T>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.532+48T>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17048
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-58597502-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597502
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597501
    reference: chr 19
allele count: 1
allele frequency: 8.394754957102802e-6
allele num: 119122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.838+38delG
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.532+38delG
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.838+38delG
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.433+38delG
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3436delG
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2174delC
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.908+38delG
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1006+38delG
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20928
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: AC
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-58597510-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597510
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597510
    reference: chr 19
allele count: 2
allele frequency: 1.67022982362373e-5
allele num: 119744
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1006+31G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.433+31G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3429G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.532+31G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.908+31G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2178C>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.838+31G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.838+31G>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22634
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23131
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-58597510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597510
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597510
    reference: chr 19
allele count: 1
allele frequency: 8.351149118118652e-6
allele num: 119744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3429G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.838+31G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.908+31G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.433+31G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.532+31G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2178C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1006+31G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.838+31G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40711
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-58597511-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597511
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597511
    reference: chr 19
allele count: 9
allele frequency: 7.506255212677231e-5
allele num: 119900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.908+30C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3428C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.433+30C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1006+30C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2179G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.838+30C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.838+30C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.532+30C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22875
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23356
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-58597511-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597511
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597511
    reference: chr 19
allele count: 1
allele frequency: 8.340283569641367e-6
allele num: 119900
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.908+30C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.838+30C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.532+30C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3428C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1006+30C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.433+30C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2179G>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.838+30C>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23356
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41344
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

19-58597534-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597534
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597534
    reference: chr 19
allele count: 39
allele frequency: 3.227408142999007e-4
allele num: 120840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.433+7T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.838+7T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.908+7T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1006+7T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2202A>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.532+7T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3405T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.838+7T>C
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8435
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23506
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24498
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1006+7T>C
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

19-58597542-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597542
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597542
    reference: chr 19
allele count: 7
allele frequency: 5.785697755149271e-5
allele num: 120988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3397A>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.837A>T
  hgvsp: ENST00000601144.1:c.837A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.837A>T
  hgvsp: ENST00000240727.6:c.837A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.432A>T
  hgvsp: ENST00000421612.2:c.432A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.531A>T
  hgvsp: ENST00000433686.2:c.531A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.907A>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.154A>T
  hgvsp: ENSP00000470329.1:p.Gln52Leu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2210T>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1005A>T
  hgvsp: ENST00000600404.1:c.1005A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23585
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43799
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln52Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-58597543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597543
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597543
    reference: chr 19
allele count: 23
allele frequency: 1.900857865419263e-4
allele num: 120998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.530C>T
  hgvsp: ENSP00000412253.2:p.Pro177Leu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.431C>T
  hgvsp: ENSP00000392653.1:p.Pro144Leu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.153C>T
  hgvsp: ENSP00000470329.1:p.Gln52Ter
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.906C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2211G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.836C>T
  hgvsp: ENSP00000468934.1:p.Pro279Leu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.1004C>T
  hgvsp: ENSP00000470123.1:p.Pro335Leu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3396C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.836C>T
  hgvsp: ENSP00000240727.5:p.Pro279Leu
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8448
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23573
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln52Ter
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

19-58597553-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597553
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597553
    reference: chr 19
allele count: 5
allele frequency: 4.129637583005715e-5
allele num: 121076
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.421A>G
  hgvsp: ENSP00000392653.1:p.Ser141Gly
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.994A>G
  hgvsp: ENSP00000470123.1:p.Ser332Gly
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3386A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.896A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2221T>C
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.826A>G
  hgvsp: ENSP00000468934.1:p.Ser276Gly
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.520A>G
  hgvsp: ENSP00000412253.2:p.Ser174Gly
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.826A>G
  hgvsp: ENSP00000240727.5:p.Ser276Gly
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.143A>G
  hgvsp: ENST00000600522.1:c.143A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23584
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser332Gly
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-58597555-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597555
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597555
    reference: chr 19
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.141G>A
  hgvsp: ENSP00000470329.1:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.518G>A
  hgvsp: ENSP00000412253.2:p.Gly173Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.894G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3384G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.419G>A
  hgvsp: ENSP00000392653.1:p.Gly140Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.992G>A
  hgvsp: ENSP00000470123.1:p.Gly331Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.824G>A
  hgvsp: ENSP00000240727.5:p.Gly275Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.824G>A
  hgvsp: ENSP00000468934.1:p.Gly275Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2223C>T
  variant of: http://identifiers.org/hgnc/12919
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43960
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly331Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

19-58597556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597556
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597556
    reference: chr 19
allele count: 1
allele frequency: 8.258320257659592e-6
allele num: 121090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2224C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.823G>A
  hgvsp: ENSP00000468934.1:p.Gly275Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.418G>A
  hgvsp: ENSP00000392653.1:p.Gly140Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.517G>A
  hgvsp: ENSP00000412253.2:p.Gly173Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.140G>A
  hgvsp: ENST00000600522.1:c.140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3383G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.893G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.991G>A
  hgvsp: ENSP00000470123.1:p.Gly331Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.823G>A
  hgvsp: ENSP00000240727.5:p.Gly275Arg
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8047
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly331Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

19-58597577-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597577
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597577
    reference: chr 19
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.872T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.802T>C
  hgvsp: ENST00000601144.1:c.802T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.397T>C
  hgvsp: ENST00000421612.2:c.397T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3362T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.496T>C
  hgvsp: ENST00000433686.2:c.496T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.119T>C
  hgvsp: ENST00000600522.1:c.119T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.802T>C
  hgvsp: ENST00000240727.6:c.802T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.970T>C
  hgvsp: ENST00000600404.1:c.970T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2245A>G
  variant of: http://identifiers.org/hgnc/12919
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu324Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP

19-58597578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597578
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597578
    reference: chr 19
allele count: 2
allele frequency: 1.650737054094653e-5
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2246C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.969G>A
  hgvsp: ENST00000600404.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3361G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.801G>A
  hgvsp: ENST00000240727.6:c.801G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.801G>A
  hgvsp: ENST00000601144.1:c.801G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.871G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.396G>A
  hgvsp: ENST00000421612.2:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.495G>A
  hgvsp: ENST00000433686.2:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.118G>A
  hgvsp: ENSP00000470329.1:p.Gly40Asp
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8051
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly40Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

19-58597579-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597579
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597579
    reference: chr 19
allele count: 21
allele frequency: 1.733388361535287e-4
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.800G>A
  hgvsp: ENSP00000468934.1:p.Arg267Gln
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.800G>A
  hgvsp: ENSP00000240727.5:p.Arg267Gln
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3360G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.968G>A
  hgvsp: ENSP00000470123.1:p.Arg323Gln
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.494G>A
  hgvsp: ENSP00000412253.2:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.117G>A
  hgvsp: ENSP00000470329.1:p.Gly40Ser
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.395G>A
  hgvsp: ENSP00000392653.1:p.Arg132Gln
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2247C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.870G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24779
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23565
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg323Gln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

19-58597580-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597580
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597580
    reference: chr 19
allele count: 42
allele frequency: 3.466662264555854e-4
allele num: 121154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.493C>T
  hgvsp: ENSP00000412253.2:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.869C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.967C>T
  hgvsp: ENSP00000470123.1:p.Arg323Trp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.116C>T
  hgvsp: ENST00000600522.1:c.116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.799C>T
  hgvsp: ENSP00000468934.1:p.Arg267Trp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.799C>T
  hgvsp: ENSP00000240727.5:p.Arg267Trp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.394C>T
  hgvsp: ENSP00000392653.1:p.Arg132Trp
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2248G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3359C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg323Trp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

19-58597583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597583
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597583
    reference: chr 19
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.866C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.964C>T
  hgvsp: ENSP00000470123.1:p.Leu322Phe
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.796C>T
  hgvsp: ENSP00000468934.1:p.Leu266Phe
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.490C>T
  hgvsp: ENSP00000412253.2:p.Leu164Phe
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.113C>T
  hgvsp: ENST00000600522.1:c.113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.391C>T
  hgvsp: ENSP00000392653.1:p.Leu131Phe
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.796C>T
  hgvsp: ENSP00000240727.5:p.Leu266Phe
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2251G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3356C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu322Phe
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

19-58597602-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597602
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597602
    reference: chr 19
allele count: 1
allele frequency: 8.259275166011431e-6
allele num: 121076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2270G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.945C>T
  hgvsp: ENST00000600404.1:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.471C>T
  hgvsp: ENST00000433686.2:c.471C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.777C>T
  hgvsp: ENST00000240727.6:c.777C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.372C>T
  hgvsp: ENST00000421612.2:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.94C>T
  hgvsp: ENSP00000470329.1:p.Pro32Leu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.777C>T
  hgvsp: ENST00000601144.1:c.777C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3337C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.847C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro32Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

19-58597610-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597610
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597610
    reference: chr 19
allele count: 3
allele frequency: 2.479707725116133e-5
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3329G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.769G>A
  hgvsp: ENSP00000240727.5:p.Ala257Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.839G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.937G>A
  hgvsp: ENSP00000470123.1:p.Ala313Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2278C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.364G>A
  hgvsp: ENSP00000392653.1:p.Ala122Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.463G>A
  hgvsp: ENSP00000412253.2:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.769G>A
  hgvsp: ENSP00000468934.1:p.Ala257Thr
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.86G>A
  hgvsp: ENST00000600522.1:c.86G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala313Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

19-58597611-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597611
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597611
    reference: chr 19
allele count: 170
allele frequency: 1.405400042988707e-3
allele num: 120962
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.768C>G
  hgvsp: ENSP00000468934.1:p.Asp256Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.936C>G
  hgvsp: ENSP00000470123.1:p.Asp312Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3328C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2279G>C
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.462C>G
  hgvsp: ENSP00000412253.2:p.Asp154Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.838C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.768C>G
  hgvsp: ENSP00000240727.5:p.Asp256Glu
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.85C>G
  hgvsp: ENSP00000470329.1:p.Thr29Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.363C>G
  hgvsp: ENSP00000392653.1:p.Asp121Glu
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24768
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 23291
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8445
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp312Glu
num of homozygotes: 2
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

19-58597627-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597627
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597627
    reference: chr 19
allele count: 1
allele frequency: 8.290636555074699e-6
allele num: 120618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.752A>G
  hgvsp: ENSP00000240727.5:p.Gln251Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.446A>G
  hgvsp: ENSP00000412253.2:p.Gln149Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.822A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3312A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2295T>C
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.347A>G
  hgvsp: ENSP00000392653.1:p.Gln116Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.920A>G
  hgvsp: ENSP00000470123.1:p.Gln307Arg
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.69A>G
  hgvsp: ENSP00000470329.1:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.752A>G
  hgvsp: ENSP00000468934.1:p.Gln251Arg
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln307Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

19-58597634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597634
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597634
    reference: chr 19
allele count: 1
allele frequency: 8.314348903337379e-6
allele num: 120274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-1G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-1G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2302C>T
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-1G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-1G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-1G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3305G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-1G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-1G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
hgvs: c.914-1G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-58597636-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597636
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597636
    reference: chr 19
allele count: 1
allele frequency: 8.323622440486099e-6
allele num: 120140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-3C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-3C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-3C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-3C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-3C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-3C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-3C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3303C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2304G>T
  variant of: http://identifiers.org/hgnc/12919
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
hgvs: c.914-3C>A
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

19-58597640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597640
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597640
    reference: chr 19
allele count: 1
allele frequency: 8.342649291709075e-6
allele num: 119866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-7C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-7C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-7C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2308G>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-7C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-7C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-7C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-7C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3299C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
hgvs: c.914-7C>T
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

19-58597642-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597642
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597642
    reference: chr 19
allele count: 2
allele frequency: 1.670787943594199e-5
allele num: 119704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3297C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2310G>C
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-9C>G
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-58597651-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597651
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597651
    reference: chr 19
allele count: 1
allele frequency: 8.404208827780952e-6
allele num: 118988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-18G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-18G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2319C>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-18G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3288G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-18G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-18G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-18G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-18G>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8206
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7453
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2963
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

19-58597656-GAAAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597656
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597652
    reference: chr 19
allele count: 1
allele frequency: 8.448800270361608e-6
allele num: 118360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-27_816-24delATTT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3279_3282delATTT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-27_746-24delATTT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-27_914-24delATTT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-27_746-24delATTT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-27_341-24delATTT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-27_63-24delATTT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2328_*2331delTAAA
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-27_440-24delATTT
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: GAAAT
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/19-58597659-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597659
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597659
    reference: chr 19
allele count: 1
allele frequency: 8.462671157524161e-6
allele num: 118166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3280T>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-26T>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-26T>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-26T>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-26T>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2327A>C
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-26T>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-26T>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-26T>G
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4747
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

19-58597660-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597660
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597660
    reference: chr 19
allele count: 6
allele frequency: 5.084487229462909e-5
allele num: 118006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-27A>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-27A>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3279A>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-27A>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2328T>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-27A>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-27A>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-27A>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-27A>C
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21418
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

19-58597661-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597661
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597661
    reference: chr 19
allele count: 1
allele frequency: 8.483347189467077e-6
allele num: 117878
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-28T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-28T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3278T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-28T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2329A>G
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-28T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-28T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-28T>C
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-28T>C
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20289
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2571
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3738
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/19-58597667-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597667
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597667
    reference: chr 19
allele count: 1
allele frequency: 8.519919571959241e-6
allele num: 117372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-34G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  hgvsc: ENST00000515535.1:c.*2335C>A
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-34G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-34G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-34G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-34G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3272G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-34G>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-34G>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12488
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26060
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

19-58597675-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58597675
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58597673
    reference: chr 19
allele count: 2
allele frequency: 1.721822376803609e-5
allele num: 116156
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.3262_3263delCT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.914-44_914-43delCT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.63-44_63-43delCT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.816-44_816-43delCT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.746-44_746-43delCT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176293
  ensembl protein: ENSP00000471344
  ensembl transcript: ENST00000515535
  gene symbol: ZNF135
  variant of: http://identifiers.org/hgnc/12919
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.341-44_341-43delCT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.440-44_440-43delCT
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.746-44_746-43delCT
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13258
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: CAG
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-58598222-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598222
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598222
    reference: chr 19
allele count: 2
allele frequency: 1.730882403849482e-5
allele num: 115548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2717A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+51A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+51A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+51A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.292A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+461A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+51A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+51A>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+51A>G
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9653
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1976
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

19-58598224-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598224
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598224
    reference: chr 19
allele count: 1
allele frequency: 8.667013347200554e-6
allele num: 115380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+49G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+49G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+459G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+49G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+49G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.290G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2715G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+49G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+49G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9855
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2599
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-58598225-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598225
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598225
    reference: chr 19
allele count: 43
allele frequency: 3.720173723461319e-4
allele num: 115586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+458C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.289C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+48C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+48C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2714C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+48C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+48C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+48C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+48C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21271
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13498
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 2
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

19-58598229-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598229
    reference: chr 19
allele count: 1
allele frequency: 8.637816360024186e-6
allele num: 115770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+44C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.285C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+44C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+44C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+454C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+44C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2710C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+44C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+44C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

19-58598229-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598229
    reference: chr 19
allele count: 1
allele frequency: 8.637816360024186e-6
allele num: 115770
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+44C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+44C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+44C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2710C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+44C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+44C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+454C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.285C>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+44C>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

19-58598231-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598231
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598231
    reference: chr 19
allele count: 4
allele frequency: 3.451251078515962e-5
allele num: 115900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+42C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+452C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2708C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+42C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+42C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+42C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.283C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+42C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+42C>G
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13549
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5944
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

19-58598238-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598238
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598238
    reference: chr 19
allele count: 1
allele frequency: 8.617866560954171e-6
allele num: 116038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+445C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+35C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+35C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2701C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+35C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+35C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.276C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+35C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+35C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-58598246-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598246
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598246
    reference: chr 19
allele count: 4
allele frequency: 3.439499208915182e-5
allele num: 116296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+437G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.268G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+27G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+27G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+27G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+27G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+27G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2693G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+27G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-58598247-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598247
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598247
    reference: chr 19
allele count: 2
allele frequency: 1.715265866209263e-5
allele num: 116600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2692C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+26C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+436C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+26C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+26C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+26C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.267C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+26C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+26C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13285
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

19-58598255-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598255
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598255
    reference: chr 19
allele count: 1
allele frequency: 8.49199205149544e-6
allele num: 117758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+18C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+18C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+18C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+18C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+428C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2684C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.259C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+18C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+18C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47594
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6178
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

19-58598263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598263
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598263
    reference: chr 19
allele count: 19
allele frequency: 1.601132590632532e-4
allele num: 118666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+10G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.251G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+10G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+10G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+10G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2676G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+10G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+420G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+10G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13969
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

19-58598264-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598264
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598264
    reference: chr 19
allele count: 3
allele frequency: 2.52325600955473e-5
allele num: 118894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.250C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+9C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2675C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+9C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+9C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+419C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+9C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+9C>T
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+9C>T
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

19-58598264-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598264
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598264
    reference: chr 19
allele count: 1
allele frequency: 8.410853365182432e-6
allele num: 118894
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+9C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2675C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.250C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+419C>G
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+9C>G
  variant of: http://identifiers.org/hgnc/21037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

19-58598270-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58598270
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58598270
    reference: chr 19
allele count: 2
allele frequency: 1.675294432996599e-5
allele num: 119382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000240727
  ensembl transcript: ENST00000240727
  gene symbol: ZSCAN18
  hgvsc: ENST00000240727.6:c.745+3G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470123
  ensembl transcript: ENST00000600404
  gene symbol: ZSCAN18
  hgvsc: ENST00000600404.1:c.913+3G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000412253
  ensembl transcript: ENST00000433686
  gene symbol: ZSCAN18
  hgvsc: ENST00000433686.2:c.439+3G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000470329
  ensembl transcript: ENST00000600522
  gene symbol: ZSCAN18
  hgvsc: ENST00000600522.1:c.62+413G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000595784
  gene symbol: ZSCAN18
  hgvsc: ENST00000595784.1:n.244G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000598497
  gene symbol: ZSCAN18
  hgvsc: ENST00000598497.1:n.2669G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000468934
  ensembl transcript: ENST00000601144
  gene symbol: ZSCAN18
  hgvsc: ENST00000601144.1:c.745+3G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl transcript: ENST00000596372
  gene symbol: ZSCAN18
  hgvsc: ENST00000596372.1:n.815+3G>A
  variant of: http://identifiers.org/hgnc/21037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121413
  ensembl protein: ENSP00000392653
  ensembl transcript: ENST00000421612
  gene symbol: ZSCAN18
  hgvsc: ENST00000421612.2:c.340+3G>A
  variant of: http://identifiers.org/hgnc/21037
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 0
hgvs: c.913+3G>A
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ

GenotypeQuality
all individuals: 29584
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 8
allele frequency: 1.39518660620858e-3
allele num: 5734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9810
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13962
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

FS
type: SiteQuality
SIO_000300: 8.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

DP
type: SiteQuality
SIO_000300: 1.054322e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

QD
type: SiteQuality
SIO_000300: 1.016e1

VQSLOD
type: SiteQuality
SIO_000300: 2.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1550
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30017
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7006
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.180812868016659e-5
allele num: 13926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.78e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

FS
type: SiteQuality
SIO_000300: 5.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

QD
type: SiteQuality
SIO_000300: 1.217e1

DP
type: SiteQuality
SIO_000300: 1.0526e6

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1044
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 408
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1384
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 12345
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3273
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 320
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 413
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1550
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2450
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48932
num of homozygotes: 0

African
type: Population
allele count: 107
allele frequency: 1.873249299719888e-2
allele num: 5712
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.612903225806452e-3
allele num: 620
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 1.021867974657674e-3
allele num: 9786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4356
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

DP
type: SiteQuality
SIO_000300: 1.0526e6

FS
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.78e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

QD
type: SiteQuality
SIO_000300: 1.217e1

GenotypeQuality
all individuals: 288
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3378
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.258077759986862e-4
allele num: 48714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13890
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.775568181818182e-4
allele num: 5632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6964
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.136e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

DP
type: SiteQuality
SIO_000300: 1.044148e6

VQSLOD
type: SiteQuality
SIO_000300: -1.205e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.046e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

QD
type: SiteQuality
SIO_000300: 1.788e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.72e-1

GenotypeQuality
all individuals: 1539
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3353
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13021
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29686
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.785076758300607e-4
allele num: 5602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.26411987485592e-4
allele num: 48584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13856
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

QD
type: SiteQuality
SIO_000300: 1.815e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

DP
type: SiteQuality
SIO_000300: 1.040529e6

FS
type: SiteQuality
SIO_000300: 1.2575e1

VQSLOD
type: SiteQuality
SIO_000300: -1.351e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13673
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3384
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 250
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.077447232840286e-5
allele num: 48136
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13730
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.693e0

FS
type: SiteQuality
SIO_000300: 4.099e0

DP
type: SiteQuality
SIO_000300: 1.029015e6

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 1.175e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
all individuals: 661
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16506
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.013863773357444e-4
allele num: 6636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3998
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9414
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.05e0

VQSLOD
type: SiteQuality
SIO_000300: -9.952e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

FS
type: SiteQuality
SIO_000300: 6.948e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

DP
type: SiteQuality
SIO_000300: 9.80735e5

MQ
type: SiteQuality
SIO_000300: 5.886e1

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

QD
type: SiteQuality
SIO_000300: 1.033e1

GenotypeQuality
all individuals: 269
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1477
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2137
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26517
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5230
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072501072501073e-4
allele num: 9324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45874
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.721e1

FS
type: SiteQuality
SIO_000300: 6.437e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.216e0

QD
type: SiteQuality
SIO_000300: 1.205e1

DP
type: SiteQuality
SIO_000300: 9.674e5

GenotypeQuality
all individuals: 901
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24897
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3735
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 738
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18022
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12980
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 4.672897196261682e-3
allele num: 5136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45272
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.52948e5

QD
type: SiteQuality
SIO_000300: 1.084e1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.436e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.968503937007874e-4
allele num: 5080
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

FS
type: SiteQuality
SIO_000300: 2.158e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

VQSLOD
type: SiteQuality
SIO_000300: -2.942e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.681e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.55e0

DP
type: SiteQuality
SIO_000300: 9.42557e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.288120080541827e-5
allele num: 43704
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

FS
type: SiteQuality
SIO_000300: 1.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.598e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

DP
type: SiteQuality
SIO_000300: 9.07533e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

QD
type: SiteQuality
SIO_000300: 8.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4680
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.720430107526882e-4
allele num: 5952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.75827940616673e-5
allele num: 42032
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

FS
type: SiteQuality
SIO_000300: 2.883e0

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQ
type: SiteQuality
SIO_000300: 5.759e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

DP
type: SiteQuality
SIO_000300: 8.62881e5

QD
type: SiteQuality
SIO_000300: 1.352e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.221001221001221e-4
allele num: 8190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40224
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.731e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.02e0

FS
type: SiteQuality
SIO_000300: 1.328e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.053e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

QD
type: SiteQuality
SIO_000300: 4.14e0

DP
type: SiteQuality
SIO_000300: 8.12636e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 28
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4058
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.134e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.055e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.42e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

DP
type: SiteQuality
SIO_000300: 7.15145e5

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4806
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.000200040008002e-4
allele num: 9998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.449e0

VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.75e-2

DP
type: SiteQuality
SIO_000300: 6.39677e5

QD
type: SiteQuality
SIO_000300: 1.522e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.022791850553171e-5
allele num: 33082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4540
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.884e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.583e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.96e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

DP
type: SiteQuality
SIO_000300: 5.96297e5

FS
type: SiteQuality
SIO_000300: 2.127e0

VQSLOD
type: SiteQuality
SIO_000300: -9.519e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7720
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.881821603312006e-4
allele num: 5314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1862
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.02321e5

BaseQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.77e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3992
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.609144542772861e-5
allele num: 21696
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 2.9e-1

InbreedingCoeff
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SIO_000300: -3.38e-2

BaseQRankSum
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QD
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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MQ
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SIO_000300: 6.0e1

DP
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SIO_000300: 4.48974e5

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 1768
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4198
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1256
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South Asian
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allele frequency: 1.57331655129012e-4
allele num: 6356
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22234
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 2456
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Other
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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DP
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2398
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 4.591368227731864e-5
allele num: 21780
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1196
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.28e-2

VQSLOD
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FS
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MQRankSum
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MQ
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DP
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 5216
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1840
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.546927002440648e-5
allele num: 18028
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
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African
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

BaseQRankSum
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.539999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1254
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.540780141843971e-5
allele num: 18048
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

QD
type: SiteQuality
SIO_000300: 1.271e1

MQRankSum
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InbreedingCoeff
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SIO_000300: -3.69e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.383e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.98e-1

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1768
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3000
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 17262
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.87e-2

FS
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 8.271824891829982e-4
allele num: 15716
num of homozygotes: 0

East Asian
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Latino
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allele frequency: 7.674597083653108e-4
allele num: 2606
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 1000
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Other
type: Population
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ClippingRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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QD
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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African
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Other
type: Population
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allele num: 888
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Latino
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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DP
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 65368
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African
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East Asian
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South Asian
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Other
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European (Finnish)
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Latino
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DP
type: SiteQuality
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MQ
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QD
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.042935824483462e-5
allele num: 65726
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.97e0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

FS
type: SiteQuality
SIO_000300: 1.4399e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 1.578882e6

QD
type: SiteQuality
SIO_000300: 4.97e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.163e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521467912241731e-5
allele num: 65726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.4399e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.163e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

DP
type: SiteQuality
SIO_000300: 1.578882e6

QD
type: SiteQuality
SIO_000300: 4.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 170
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.367116296026249e-4
allele num: 65832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.395e1

FS
type: SiteQuality
SIO_000300: 2.457e0

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

DP
type: SiteQuality
SIO_000300: 1.582991e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519018106695832e-5
allele num: 65832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

FS
type: SiteQuality
SIO_000300: 2.457e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.582991e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

QD
type: SiteQuality
SIO_000300: 1.395e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 39

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 55
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variant carriers: 0

African
type: Population
allele count: 35
allele frequency: 3.377726307662613e-3
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.077549532028686e-5
allele num: 16454
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.601456815816858e-4
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.6e0

DP
type: SiteQuality
SIO_000300: 1.60764e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 2.441e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1234
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 6
allele frequency: 5.199306759098787e-4
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

FS
type: SiteQuality
SIO_000300: 1.339e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.138e0

DP
type: SiteQuality
SIO_000300: 1.610428e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.73e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

QD
type: SiteQuality
SIO_000300: 1.194e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 20
allele frequency: 1.92789666473877e-3
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598302442404296e-4
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.285e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.61163e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

QD
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SIO_000300: 1.243e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.031772980839195e-4
allele num: 16492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.612064e6

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.732e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.116e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 1.018e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.675e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

DP
type: SiteQuality
SIO_000300: 1.612101e6

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503623733197005e-5
allele num: 66506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e0

DP
type: SiteQuality
SIO_000300: 1.612379e6

FS
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: -1.088e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.093e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.123e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2251
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 3.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.6e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 8.92e0

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

FS
type: SiteQuality
SIO_000300: 5.445e0

DP
type: SiteQuality
SIO_000300: 1.613516e6

GenotypeQuality
all individuals: 158
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005710850616171e-5
allele num: 66540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.115e0

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

DP
type: SiteQuality
SIO_000300: 1.613571e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e0

VQSLOD
type: SiteQuality
SIO_000300: 2.85e-1

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

GenotypeQuality
all individuals: 8047
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.052125293092046e-4
allele num: 66532
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.124372945857118e-3
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.614376e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.083e1

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 42

GenotypeQuality
all individuals: 44008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8047
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.059137178865729e-4
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 30
allele frequency: 3.469010175763182e-3
allele num: 8648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.615771e6

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

QD
type: SiteQuality
SIO_000300: 1.065e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.924e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-2

QD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

FS
type: SiteQuality
SIO_000300: 3.188e0

VQSLOD
type: SiteQuality
SIO_000300: -5.599e-1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 4.79e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.895e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.014e0

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.612267e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011413256241154e-5
allele num: 66414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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MQ
type: SiteQuality
SIO_000300: 5.881e1

DP
type: SiteQuality
SIO_000300: 1.611005e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.059e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0579e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.098e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 9.75e1
variant carriers: 168

Latino
type: Population
allele count: 6
allele frequency: 5.193006750908776e-4
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011594639361542e-5
allele num: 66410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 161
allele frequency: 1.554654306682117e-2
allele num: 10356
num of homozygotes: 2

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

QD
type: SiteQuality
SIO_000300: 1.139e1

FS
type: SiteQuality
SIO_000300: 1.255e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.615194e6

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.072e0

QD
type: SiteQuality
SIO_000300: 1.441e1

FS
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.784e0

DP
type: SiteQuality
SIO_000300: 1.601685e6

GenotypeQuality
all individuals: 42943
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.525e0

QD
type: SiteQuality
SIO_000300: 2.253e1

MQRankSum
type: SiteQuality
SIO_000300: 7.66e-1

DP
type: SiteQuality
SIO_000300: 1.594446e6

MQ
type: SiteQuality
SIO_000300: 5.907e1

VQSLOD
type: SiteQuality
SIO_000300: -1.224e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.467e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1231
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2191
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variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.12369871402327e-5
allele num: 16330
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.513e0

FS
type: SiteQuality
SIO_000300: 9.944000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.256e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.139e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 1.591216e6

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.905e0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 1186
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variant carriers: 0

GenotypeQuality
all individuals: 55
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GenotypeQuality
all individuals: 2030
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 347
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variant carriers: 0

GenotypeQuality
all individuals: 594
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variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519341213649761e-5
allele num: 65818
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

FS
type: SiteQuality
SIO_000300: 2.102e0

VQSLOD
type: SiteQuality
SIO_000300: 5.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.583909e6

QD
type: SiteQuality
SIO_000300: 1.442e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
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variant carriers: 0

GenotypeQuality
all individuals: 1807
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variant carriers: 0

GenotypeQuality
all individuals: 2179
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variant carriers: 0

GenotypeQuality
all individuals: 41508
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variant carriers: 0

GenotypeQuality
all individuals: 65
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 1177
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 594
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.967342120794806e-4
allele num: 10166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.016e1

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.125e0

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 2.528e0

DP
type: SiteQuality
SIO_000300: 1.578658e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 836
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1163
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530502923260583e-5
allele num: 65338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16162
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.893e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.206e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.54832e6

QD
type: SiteQuality
SIO_000300: 1.204e1

GenotypeQuality
all individuals: 6861
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539314081645219e-5
allele num: 64964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.507091e6

QD
type: SiteQuality
SIO_000300: 5.82e0

MQ
type: SiteQuality
SIO_000300: 5.727e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 587
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variant carriers: 0

GenotypeQuality
all individuals: 2083
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541924939093965e-5
allele num: 64854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.832e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.101e1

DP
type: SiteQuality
SIO_000300: 1.477336e6

VQSLOD
type: SiteQuality
SIO_000300: -2.037e0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 6
allele frequency: 6.018054162487463e-4
allele num: 9970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.477159e6

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

QD
type: SiteQuality
SIO_000300: 1.423e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 88
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2039
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variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.24687656171914e-5
allele num: 16008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

DP
type: SiteQuality
SIO_000300: 1.44663e6

MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.529e0

QD
type: SiteQuality
SIO_000300: 7.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

FS
type: SiteQuality
SIO_000300: 4.416e0

MQRankSum
type: SiteQuality
SIO_000300: -9.379999999999999e-1

GenotypeQuality
all individuals: 4856
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5537
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variant carriers: 0

GenotypeQuality
all individuals: 5528
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552361141295911e-5
allele num: 64418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.137e0

QD
type: SiteQuality
SIO_000300: 1.498e1

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.396439e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5535
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6091
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1589
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.139224611520955e-5
allele num: 63710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

QD
type: SiteQuality
SIO_000300: 1.35e1

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.006e1

FS
type: SiteQuality
SIO_000300: 2.442e0

DP
type: SiteQuality
SIO_000300: 1.312672e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.87e-1

GenotypeQuality
all individuals: 2009
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 2.25e1
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GenotypeQuality
all individuals: 192
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GenotypeQuality
all individuals: 1070
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GenotypeQuality
all individuals: 920
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 236
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variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.127932436659368e-5
allele num: 63940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.300000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.547e-1

DP
type: SiteQuality
SIO_000300: 1.535114e6

QD
type: SiteQuality
SIO_000300: 1.48e1

GenotypeQuality
all individuals: 1340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
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variant carriers: 0

GenotypeQuality
all individuals: 242
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5909
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 464
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variant carriers: 1

GenotypeQuality
all individuals: 164
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.823e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.96e-1

FS
type: SiteQuality
SIO_000300: 4.559e0

VQSLOD
type: SiteQuality
SIO_000300: -2.48e-1

DP
type: SiteQuality
SIO_000300: 1.537214e6

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.18e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 39

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.184834123222749e-3
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.382916836080442e-5
allele num: 63946
num of homozygotes: 0

South Asian
type: Population
allele count: 36
allele frequency: 2.497918401332223e-3
allele num: 14412
num of homozygotes: 2

QD
type: SiteQuality
SIO_000300: 1.377e1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.540955e6

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-2

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 148
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GenotypeQuality
all individuals: 1748
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.561914282144196e-5
allele num: 64024
num of homozygotes: 0

Other
type: Population
allele count: 0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.181e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 702
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64024
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14466
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.759e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

FS
type: SiteQuality
SIO_000300: 4.181e0

DP
type: SiteQuality
SIO_000300: 1.547983e6

GenotypeQuality
all individuals: 1690
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.240249609984399e-5
allele num: 64100
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

BaseQRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
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SIO_000300: 1.81e0

QD
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SIO_000300: 1.261e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

DP
type: SiteQuality
SIO_000300: 1.551104e6

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558943659776136e-5
allele num: 64146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.354e0

MQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.051e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.05e-1

FS
type: SiteQuality
SIO_000300: 1.1552e1

QD
type: SiteQuality
SIO_000300: 1.014e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.262e0

DP
type: SiteQuality
SIO_000300: 1.563611e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44401
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.984857541342897e-4
allele num: 10038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 2.601e1

VQSLOD
type: SiteQuality
SIO_000300: -3.605e0

DP
type: SiteQuality
SIO_000300: 1.581947e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.018e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 431
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.930486593843098e-5
allele num: 10070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55269859014968e-5
allele num: 64404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

DP
type: SiteQuality
SIO_000300: 1.587547e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: 5.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 5.71e-1

QD
type: SiteQuality
SIO_000300: 9.029999999999999e0

GenotypeQuality
all individuals: 579
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variant carriers: 0

GenotypeQuality
all individuals: 824
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 176
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64850
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.616952e6

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.119e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

QD
type: SiteQuality
SIO_000300: 1.273e1

FS
type: SiteQuality
SIO_000300: 4.386e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.598546859192495e-5
allele num: 65238
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15752
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European (Finnish)
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allele count: 1
allele frequency: 1.537515375153752e-4
allele num: 6504
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 14
allele frequency: 1.629422718808194e-3
allele num: 8592
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VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.417e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
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South Asian
type: Population
allele count: 0
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Latino
type: Population
allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

African
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allele count: 0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.061661870063071e-5
allele num: 65324
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.44e-1

FS
type: SiteQuality
SIO_000300: 1.284e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530830935031535e-5
allele num: 65324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.234e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.637825e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

FS
type: SiteQuality
SIO_000300: 1.284e0

VQSLOD
type: SiteQuality
SIO_000300: 9.67e-1

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49865
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6333
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526810797605961e-5
allele num: 65496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.939e1