X-151424241-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424241
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424241
    reference: chr 0
allele count: 1
allele frequency: 1.145121211080193e-5
allele num: 87327
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.551+9G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.221+9G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.551+9G>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS

X-151424243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424243
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424243
    reference: chr 0
allele count: 3
allele frequency: 3.433751487958978e-5
allele num: 87368
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.551+7G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.551+7G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.221+7G>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 364
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  variant carriers: 0
hgvs: c.551+7G>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP

X-151424247-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424247
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424247
    reference: chr 0
allele count: 5
allele frequency: 5.718860802928057e-5
allele num: 87430
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.551+3C>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.221+3C>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.551+3C>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8844
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hgvs: c.551+3C>G
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-151424256-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424256
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424256
    reference: chr 0
allele count: 1
allele frequency: 1.14234798204229e-5
allele num: 87539
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.545C>A
  hgvsp: ENSP00000359337.4:p.Thr182Lys
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.215C>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.545C>A
  hgvsp: ENSP00000443527.1:p.Thr182Lys
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 24
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hgvs: p.Thr182Lys
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

X-151424261-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424261
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424261
    reference: chr 0
allele count: 1
allele frequency: 1.141813199360585e-5
allele num: 87580
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.540C>G
  hgvsp: ENST00000535043.1:c.540C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.210C>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.540C>G
  hgvsp: ENST00000370314.4:c.540C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10051
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 900
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu180Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-151424267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424267
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424267
    reference: chr 0
allele count: 1
allele frequency: 1.141526449167827e-5
allele num: 87602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.204C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.534C>T
  hgvsp: ENST00000370314.4:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.534C>T
  hgvsp: ENST00000535043.1:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr178Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

X-151424272-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424272
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424272
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 87628
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.529G>A
  hgvsp: ENSP00000359337.4:p.Gly177Arg
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.529G>A
  hgvsp: ENSP00000443527.1:p.Gly177Arg
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.199G>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 648
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly177Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-151424274-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424274
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424274
    reference: chr 0
allele count: 1
allele frequency: 1.141031492469192e-5
allele num: 87640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.527A>G
  hgvsp: ENSP00000443527.1:p.Asn176Ser
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.527A>G
  hgvsp: ENSP00000359337.4:p.Asn176Ser
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.197A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10063
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2813
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genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn176Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

X-151424303-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424303
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424303
    reference: chr 0
allele count: 2
allele frequency: 2.280891828705024e-5
allele num: 87685
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.498G>A
  hgvsp: ENST00000535043.1:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.168G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.498G>A
  hgvsp: ENST00000370314.4:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39320
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2273
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2813
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8911
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr166Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

X-151424315-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424315
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424315
    reference: chr 0
allele count: 1
allele frequency: 1.140367882678952e-5
allele num: 87691
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.486T>C
  hgvsp: ENST00000535043.1:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.486T>C
  hgvsp: ENST00000370314.4:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.156T>C
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3974
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His162His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

X-151424354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424354
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424354
    reference: chr 0
allele count: 3
allele frequency: 3.42141578185053e-5
allele num: 87683
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.447G>A
  hgvsp: ENST00000535043.1:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.447G>A
  hgvsp: ENST00000370314.4:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.117G>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8911
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39339
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro149Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

X-151424446-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424446
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424446
    reference: chr 0
allele count: 1
allele frequency: 1.145921664794995e-5
allele num: 87266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.25C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.355C>T
  hgvsp: ENSP00000443527.1:p.Arg119Trp
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.355C>T
  hgvsp: ENSP00000359337.4:p.Arg119Trp
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22256
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 427
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8731
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg119Trp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

X-151424455-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424455
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424455
    reference: chr 0
allele count: 1
allele frequency: 1.149980450332344e-5
allele num: 86958
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.346G>A
  hgvsp: ENSP00000359337.4:p.Val116Ile
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000011677
  ensembl transcript: ENST00000417858
  gene symbol: GABRA3
  hgvsc: ENST00000417858.1:n.16G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.346G>A
  hgvsp: ENSP00000443527.1:p.Val116Ile
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
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  variant carriers: 0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val116Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

X-151424474-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424474
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424474
    reference: chr 0
allele count: 13
allele frequency: 1.546716796154624e-4
allele num: 84049
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-4C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-4C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 9
hgvs: c.331-4C>T
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4398
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD

X-151424479-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424479
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424479
    reference: chr 0
allele count: 1
allele frequency: 1.286140549439243e-5
allele num: 77752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-9C>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-9C>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6789
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

X-151424488-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424488
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424489
    reference: chr 0
allele count: 12326
allele frequency: 1.496509439689188e-1
allele num: 82365
alternate allele: GA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-19dupT
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-19dupT
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 625
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1029
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1403
genotype quality: GenotypeQuality
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  variant carriers: 101
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 246
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 911
population: Latino
  type: Population
  allele count: 500
  allele frequency: 5.746465923457074e-2
  allele num: 8701
  num of homozygotes: 12
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

X-151424492-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424492
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424492
    reference: chr 0
allele count: 2
allele frequency: 2.448879637565814e-5
allele num: 81670
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-22T>C
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-22T>C
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9498
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

X-151424496-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424496
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424496
    reference: chr 0
allele count: 1
allele frequency: 1.234842310636932e-5
allele num: 80982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-26A>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-26A>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8621
  num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

X-151424497-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424497
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424496
    reference: chr 0
allele count: 1
allele frequency: 1.235849522962084e-5
allele num: 80916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-28delA
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-28delA
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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population: African
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  allele num: 8087
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population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: GT
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-151424503-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424503
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424503
    reference: chr 0
allele count: 59
allele frequency: 7.406477529500377e-4
allele num: 79660
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-33C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-33C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
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num of homozygotes: 1
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  type: Population
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  allele num: 5888
  num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

X-151424504-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424504
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424504
    reference: chr 0
allele count: 2
allele frequency: 2.510954036986353e-5
allele num: 79651
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-34A>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-34A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4249
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

X-151424505-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424505
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424505
    reference: chr 0
allele count: 1
allele frequency: 1.259937759074702e-5
allele num: 79369
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-35A>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-35A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.33007898967775e-5
  allele num: 42917
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD

X-151424507-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424507
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424507
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 78861
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-37T>C
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-37T>C
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7938
  num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-151424519-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424519
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424519
    reference: chr 0
allele count: 2
allele frequency: 2.628569926531471e-5
allele num: 76087
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-49C>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-49C>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 0.0e0
  allele num: 8113
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

X-151424522-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151424522
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151424522
    reference: chr 0
allele count: 18
allele frequency: 2.379284364136254e-4
allele num: 75653
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.331-52A>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.331-52A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
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  allele num: 7746
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

X-151453119-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453119
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453119
    reference: chr 0
allele count: 3
allele frequency: 3.540825720558034e-5
allele num: 84726
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.330+21A>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.330+21A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9156
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
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site quality: VQSLOD
site quality: FS
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site quality: QD
site quality: DP
site quality: InbreedingCoeff

X-151453124-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453124
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453124
    reference: chr 0
allele count: 1
allele frequency: 1.17820324005891e-5
allele num: 84875
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.330+16G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.330+16G>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 2.113762708998288e-5
  allele num: 47309
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
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X-151453132-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453132
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453132
    reference: chr 0
allele count: 4
allele frequency: 4.688342436531565e-5
allele num: 85318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.330+8C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.330+8C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
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  allele num: 8489
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

X-151453132-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453132
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453132
    reference: chr 0
allele count: 1
allele frequency: 1.172085609132891e-5
allele num: 85318
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.330+8C>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.330+8C>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: c.330+8C>G
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.109081705825284e-5
  allele num: 47414
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
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site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

X-151453136-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453136
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453136
    reference: chr 0
allele count: 1
allele frequency: 1.1685655857435e-5
allele num: 85575
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.330+4A>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.330+4A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.330+4A>G
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8728
  num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

X-151453176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453176
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453176
    reference: chr 0
allele count: 8
allele frequency: 9.249196476056143e-5
allele num: 86494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.294C>T
  hgvsp: ENST00000535043.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.294C>T
  hgvsp: ENST00000370314.4:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr98Tyr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9162
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum

X-151453180-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453180
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453180
    reference: chr 0
allele count: 1
allele frequency: 1.156162926479599e-5
allele num: 86493
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.290T>C
  hgvsp: ENSP00000443527.1:p.Ile97Thr
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.290T>C
  hgvsp: ENSP00000359337.4:p.Ile97Thr
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ile97Thr
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4515
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

X-151453182-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453182
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453182
    reference: chr 0
allele count: 1
allele frequency: 1.156590832861059e-5
allele num: 86461
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.288C>T
  hgvsp: ENST00000535043.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.288C>T
  hgvsp: ENST00000370314.4:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23296
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp96Asp
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47623
  num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
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site quality: DP

X-151453194-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453194
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453194
    reference: chr 0
allele count: 26
allele frequency: 3.018587533233488e-4
allele num: 86133
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.276A>G
  hgvsp: ENST00000535043.1:c.276A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.276A>G
  hgvsp: ENST00000370314.4:c.276A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu92Glu
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9302
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
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X-151453197-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453197
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453197
    reference: chr 0
allele count: 2
allele frequency: 2.326230575974691e-5
allele num: 85976
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.273T>C
  hgvsp: ENST00000370314.4:c.273T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.273T>C
  hgvsp: ENST00000535043.1:c.273T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Thr91Thr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 47431
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population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
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site quality: MQ
site quality: MQRankSum
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X-151453208-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453208
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453208
    reference: chr 0
allele count: 1
allele frequency: 1.17590338777766e-5
allele num: 85041
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.263-1G>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.263-1G>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: c.263-1G>T
num of homozygotes: 0
population: Other
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  allele num: 614
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
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site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
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X-151453210-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453210
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453210
    reference: chr 0
allele count: 1
allele frequency: 1.17881434852825e-5
allele num: 84831
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.263-3C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.263-3C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
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  allele num: 8448
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population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
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site quality: InbreedingCoeff
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X-151453211-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453211
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453211
    reference: chr 0
allele count: 3
allele frequency: 3.542540001180847e-5
allele num: 84685
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.263-4G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
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  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.263-4G>A
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4478
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
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X-151453212-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453212
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453212
    reference: chr 0
allele count: 18
allele frequency: 2.133788541555532e-4
allele num: 84357
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.263-5C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.263-5C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.263-5C>T
num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 1.898208565666153e-3
  allele num: 8429
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population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
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site quality: MQ
site quality: BaseQRankSum
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site quality: DP
site quality: InbreedingCoeff

X-151453247-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453247
    reference: chr 0
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    type: ExactPosition
    position: 24151453247
    reference: chr 0
allele count: 3
allele frequency: 3.729070591306293e-5
allele num: 80449
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
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  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.263-40C>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.263-40C>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  allele num: 4349
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population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
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site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
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X-151453252-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453252
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453252
    reference: chr 0
allele count: 1
allele frequency: 1.258114840722661e-5
allele num: 79484
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.263-45A>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.263-45A>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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X-151453257-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151453257
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151453257
    reference: chr 0
allele count: 1
allele frequency: 1.276063599009775e-5
allele num: 78366
alternate allele: A
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000011677
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  gene symbol: GABRA3
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  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.263-50A>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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site quality: MQ
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site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

X-151514012-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514012
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514012
    reference: chr 0
allele count: 1
allele frequency: 1.19965929675972e-5
allele num: 83357
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.262+41C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.262+41C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7192
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

X-151514020-G-GAAAAGGACTTCAAAGATCTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514020
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514040
    reference: chr 0
allele count: 1
allele frequency: 1.198437237841854e-5
allele num: 83442
alternate allele: GAAAAGGACTTCAAAGATCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6577
  num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

X-151514022-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514022
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514022
    reference: chr 0
allele count: 1
allele frequency: 1.197891710589363e-5
allele num: 83480
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.262+31T>C
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.262+31T>C
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.132468972576449e-5
  allele num: 46894
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

X-151514025-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514025
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514025
    reference: chr 0
allele count: 19
allele frequency: 2.273706380738117e-4
allele num: 83564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.262+28C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.262+28C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 16
  allele frequency: 1.89237137788291e-3
  allele num: 8455
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

X-151514026-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514026
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514026
    reference: chr 0
allele count: 1
allele frequency: 1.196386911527188e-5
allele num: 83585
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.262+27C>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.262+27C>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
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  allele frequency: 0.0e0
  allele num: 7341
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population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
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X-151514029-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514029
    reference: chr 0
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    type: ExactPosition
    position: 24151514029
    reference: chr 0
allele count: 2
allele frequency: 2.390743042937745e-5
allele num: 83656
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.262+24A>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.262+24A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele num: 4526
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population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
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site quality: MQ
site quality: DP
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site quality: VQSLOD
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X-151514036-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514036
    reference: chr 0
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    type: ExactPosition
    position: 24151514036
    reference: chr 0
allele count: 1
allele frequency: 1.191852496335054e-5
allele num: 83903
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.262+17T>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.262+17T>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

X-151514038-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514038
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514038
    reference: chr 0
allele count: 2
allele frequency: 2.382654276864427e-5
allele num: 83940
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.262+15G>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.262+15G>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
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site quality: FS
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site quality: DP
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X-151514045-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514045
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514045
    reference: chr 0
allele count: 1
allele frequency: 1.186788668541793e-5
allele num: 84261
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
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  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.262+8C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.262+8C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.262+8C>T
num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 1.51952590791673e-4
  allele num: 6581
  num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

X-151514068-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514068
    reference: chr 0
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    type: ExactPosition
    position: 24151514068
    reference: chr 0
allele count: 1
allele frequency: 1.166031179673744e-5
allele num: 85761
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.247C>T
  hgvsp: ENSP00000359337.4:p.Arg83Ter
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.247C>T
  hgvsp: ENSP00000443527.1:p.Arg83Ter
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Arg83Ter
num of homozygotes: 0
population: Other
  type: Population
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  allele num: 617
  num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
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X-151514068-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514068
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514068
    reference: chr 0
allele count: 3
allele frequency: 3.498093539021234e-5
allele num: 85761
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.247C>A
  hgvsp: ENST00000535043.1:c.247C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
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  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.247C>A
  hgvsp: ENST00000370314.4:c.247C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
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  allele num: 8887
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population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
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site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
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X-151514074-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514074
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514074
    reference: chr 0
allele count: 1
allele frequency: 1.160685268582571e-5
allele num: 86156
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.241C>T
  hgvsp: ENSP00000359337.4:p.Arg81Trp
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.241C>T
  hgvsp: ENSP00000443527.1:p.Arg81Trp
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Arg81Trp
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population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
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site quality: DP
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X-151514087-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514087
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514087
    reference: chr 0
allele count: 4
allele frequency: 4.620111344683407e-5
allele num: 86578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.228C>T
  hgvsp: ENST00000535043.1:c.228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
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  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp76Asp
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 3
  allele frequency: 6.29643621710112e-5
  allele num: 47646
  num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-151514099-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514099
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514099
    reference: chr 0
allele count: 1
allele frequency: 1.152604887044721e-5
allele num: 86760
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.216T>C
  hgvsp: ENST00000370314.4:c.216T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.216T>C
  hgvsp: ENST00000535043.1:c.216T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 383
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp72Asp
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4526
  num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

X-151514119-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514119
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514119
    reference: chr 0
allele count: 1
allele frequency: 1.150430260917583e-5
allele num: 86924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.196A>G
  hgvsp: ENSP00000443527.1:p.Ile66Val
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.196A>G
  hgvsp: ENSP00000359337.4:p.Ile66Val
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ile66Val
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8490
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

X-151514142-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514142
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514142
    reference: chr 0
allele count: 3
allele frequency: 3.462124359506994e-5
allele num: 86652
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.173A>C
  hgvsp: ENSP00000443527.1:p.Asp58Ala
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.173A>C
  hgvsp: ENSP00000359337.4:p.Asp58Ala
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp58Ala
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9171
  num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS

X-151514168-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514168
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514168
    reference: chr 0
allele count: 1
allele frequency: 1.16442902222895e-5
allele num: 85879
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.147T>G
  hgvsp: ENST00000370314.4:c.147T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.147T>G
  hgvsp: ENST00000535043.1:c.147T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2159
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ser49Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4519
  num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

X-151514173-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514173
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514173
    reference: chr 0
allele count: 1
allele frequency: 1.167815018101133e-5
allele num: 85630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.142C>T
  hgvsp: ENST00000535043.1:c.142C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.142C>T
  hgvsp: ENST00000370314.4:c.142C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.142C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: MQ
site quality: VQSLOD
site quality: FS
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X-151514179-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514179
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514179
    reference: chr 0
allele count: 1
allele frequency: 1.186436656146928e-5
allele num: 84286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-5C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-5C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.141-5C>T
num of homozygotes: 0
population: African
  type: Population
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  allele num: 8413
  num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
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site quality: ClippingRankSum
site quality: FS
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X-151514184-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514184
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514184
    reference: chr 0
allele count: 2
allele frequency: 2.417327402823438e-5
allele num: 82736
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-10A>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-10A>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Other
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population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
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X-151514185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514185
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514185
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 81210
alternate allele: A
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000011677
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  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-11C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-11C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
population: East Asian
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site quality: ReadPosRankSum
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site quality: DP
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X-151514190-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514190
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514190
    reference: chr 0
allele count: 1
allele frequency: 1.329716504441253e-5
allele num: 75204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-16C>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-16C>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10976
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 560
  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 595
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6774
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

X-151514195-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514195
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514195
    reference: chr 0
allele count: 1
allele frequency: 1.2705027379334e-5
allele num: 78709
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-21C>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-21C>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 175
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6124
  num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-151514195-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514195
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514196
    reference: chr 0
allele count: 13953
allele frequency: 1.772732470238473e-1
allele num: 78709
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-22dupT
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-22dupT
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 282
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 4.25e1
  variant carriers: 1003
genotype depth: GenotypeDepth
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  variant carriers: 1783
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 2.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 4265
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  variant carriers: 1218
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 1457
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 541
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 175
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genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 3.25e1
  variant carriers: 1463
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 1917
genotype depth: GenotypeDepth
  all individuals: 210
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 12975
  bin: 2.75e1
  variant carriers: 1665
genotype depth: GenotypeDepth
  all individuals: 302
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  variant carriers: 182
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 8.25e1
  variant carriers: 248
genotype quality: GenotypeQuality
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  variant carriers: 346
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 647
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 276
genotype quality: GenotypeQuality
  all individuals: 2494
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  variant carriers: 378
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 793
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  variant carriers: 495
num of homozygotes: 1160
population: Latino
  type: Population
  allele count: 636
  allele frequency: 7.261102865623929e-2
  allele num: 8759
  num of homozygotes: 16
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

X-151514195-G-GAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514195
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514197
    reference: chr 0
allele count: 2
allele frequency: 2.5410054758668e-5
allele num: 78709
alternate allele: GAA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-23_141-22dupTT
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-23_141-22dupTT
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 78
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genotype depth: GenotypeDepth
  all individuals: 2336
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 793
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  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 1.141682840506907e-4
  allele num: 8759
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

X-151514195-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514195
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514194
    reference: chr 0
allele count: 3
allele frequency: 3.811508213800201e-5
allele num: 78709
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-22delT
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-22delT
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10581
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 0.0e0
  allele num: 8759
  num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: GA
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
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site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
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site quality: QD

X-151514209-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514209
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514209
    reference: chr 0
allele count: 1
allele frequency: 1.338347675959261e-5
allele num: 74719
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-35C>A
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-35C>A
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 41930
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population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
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X-151514217-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514217
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514217
    reference: chr 0
allele count: 13
allele frequency: 1.815439615685398e-4
allele num: 71608
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-43A>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-43A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
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  allele num: 5484
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population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
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site quality: MQRankSum

X-151514220-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514220
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514219
    reference: chr 0
allele count: 14
allele frequency: 2.103333784047716e-4
allele num: 66561
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-47delT
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-47delT
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: South Asian
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  allele num: 4848
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population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: GA
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
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site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
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X-151514220-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151514220
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151514221
    reference: chr 0
allele count: 3
allele frequency: 4.507143822959391e-5
allele num: 66561
alternate allele: GA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.141-47dupT
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.141-47dupT
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 434
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 2
  allele frequency: 4.125412541254125e-4
  allele num: 4848
  num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

X-151532855-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151532855
    reference: chr 0
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    type: ExactPosition
    position: 24151532855
    reference: chr 0
allele count: 2
allele frequency: 2.401911921889824e-5
allele num: 83267
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.140+48T>C
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.140+48T>C
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 2.154708037060978e-4
  allele num: 9282
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population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
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X-151532870-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151532870
    reference: chr 0
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    type: ExactPosition
    position: 24151532870
    reference: chr 0
allele count: 2
allele frequency: 2.397592816811921e-5
allele num: 83417
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.140+33A>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.140+33A>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
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  allele num: 9284
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population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
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site quality: VQSLOD

X-151532871-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151532871
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151532871
    reference: chr 0
allele count: 1
allele frequency: 1.198825151351675e-5
allele num: 83415
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.140+32G>T
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.140+32G>T
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  allele num: 4529
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population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
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site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
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X-151532880-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151532880
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151532880
    reference: chr 0
allele count: 12
allele frequency: 1.434205808533525e-4
allele num: 83670
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.140+23A>G
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.140+23A>G
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

X-151532884-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151532884
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151532884
    reference: chr 0
allele count: 5
allele frequency: 5.962531452353411e-5
allele num: 83857
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000359337
  ensembl transcript: ENST00000370314
  gene symbol: GABRA3
  hgvsc: ENST00000370314.4:c.140+19T>C
  variant of: http://identifiers.org/hgnc/4077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000011677
  ensembl protein: ENSP00000443527
  ensembl transcript: ENST00000535043
  gene symbol: GABRA3
  hgvsc: ENST00000535043.1:c.140+19T>C
  variant of: http://identifiers.org/hgnc/4077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34052
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2909
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6742
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 587
  num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

X-151532885-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24151532885
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24151532885
    reference: chr 0
allele count: 6
allele frequency: 7.152478929989152e-5
allele num: 83887
alternate allele: G
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 2816
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9251
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.17813383600377e-4
allele num: 8488
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-1

QD
type: SiteQuality
SIO_000300: 1.353e1

VQSLOD
type: SiteQuality
SIO_000300: 8.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.894e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

DP
type: SiteQuality
SIO_000300: 1.959406e6

MQ
type: SiteQuality
SIO_000300: 5.992e1

FS
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
all individuals: 901
bin: 9.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10005
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.271427376870975e-5
allele num: 47836
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -1.162e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.24e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.398e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 7.04e0

DP
type: SiteQuality
SIO_000300: 1.960685e6

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4519
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9263
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.044822902518023e-4
allele num: 47855
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

FS
type: SiteQuality
SIO_000300: 3.373e0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e-1

DP
type: SiteQuality
SIO_000300: 1.962982e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 2.795e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.34e-1

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9275
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088118605136772e-5
allele num: 47890
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.462e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.818e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.902e0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

VQSLOD
type: SiteQuality
SIO_000300: -1.88e0

FS
type: SiteQuality
SIO_000300: 3.763e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 1.96626e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.900990099009902e-5
allele num: 10100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9281
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47909
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.246e1

VQSLOD
type: SiteQuality
SIO_000300: 9.419999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.967308e6

FS
type: SiteQuality
SIO_000300: 2.335e0

MQRankSum
type: SiteQuality
SIO_000300: 6.57e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.518e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.95e-1

GenotypeQuality
all individuals: 648
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.208968411751712e-4
allele num: 4527
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.05e-2

QD
type: SiteQuality
SIO_000300: 3.191e1

VQSLOD
type: SiteQuality
SIO_000300: -2.668e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.28e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.99e-1

DP
type: SiteQuality
SIO_000300: 1.968219e6

GenotypeQuality
all individuals: 2275
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47933
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9289
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8503
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10109
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.968839e6

FS
type: SiteQuality
SIO_000300: 3.67e0

QD
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

VQSLOD
type: SiteQuality
SIO_000300: -2.949e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.24e-1

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9287
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47945
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.892175289346128e-5
allele num: 10109
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8505
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.361e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.59e-2

DP
type: SiteQuality
SIO_000300: 1.96909e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 1.2218e1

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.48e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.437e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.049e0

GenotypeQuality
all individuals: 3976
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.075847229693384e-4
allele num: 9295
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084853539038883e-5
allele num: 47965
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.924e1

DP
type: SiteQuality
SIO_000300: 1.970502e6

VQSLOD
type: SiteQuality
SIO_000300: -2.202e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.673e1

FS
type: SiteQuality
SIO_000300: 3.312e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.524e0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

GenotypeQuality
all individuals: 1669
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084636230977694e-5
allele num: 47970
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.122e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: -1.074e0

QD
type: SiteQuality
SIO_000300: 2.116e1

DP
type: SiteQuality
SIO_000300: 1.970462e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.25e-1

FS
type: SiteQuality
SIO_000300: 3.023e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.084766610377968e-5
allele num: 47967
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.349900129244507e-4
allele num: 8511
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9289
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.970927e6

QD
type: SiteQuality
SIO_000300: 1.721e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

FS
type: SiteQuality
SIO_000300: 1.107e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.15e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

GenotypeQuality
all individuals: 38461
bin: 6.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4507
num of homozygotes: 0

South Asian
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allele count: 0
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Latino
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Other
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European (Non-Finnish)
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allele frequency: 2.094855036031507e-5
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African
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East Asian
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BaseQRankSum
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VQSLOD
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FS
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SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: -1.78e-1

DP
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SIO_000300: 1.95992e6

InbreedingCoeff
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SIO_000300: 1.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

QD
type: SiteQuality
SIO_000300: 3.274e1

GenotypeQuality
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variant carriers: 0

East Asian
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4503
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.103491796381994e-5
allele num: 47540
num of homozygotes: 0

South Asian
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Other
type: Population
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allele num: 625
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African
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Latino
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allele num: 9177
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VQSLOD
type: SiteQuality
SIO_000300: -5.266999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.874e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.36e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.946782e6

QD
type: SiteQuality
SIO_000300: 3.096e1

South Asian
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allele count: 2
allele frequency: 2.068466232288758e-4
allele num: 9669
num of homozygotes: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 2.402008952942461e-4
allele num: 45795
num of homozygotes: 0

Latino
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allele count: 0
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allele num: 8930
num of homozygotes: 0

African
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East Asian
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allele count: 0
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Other
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allele count: 0
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allele num: 609
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.65e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

FS
type: SiteQuality
SIO_000300: 8.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.840032e6

QD
type: SiteQuality
SIO_000300: 2.154e1

VQSLOD
type: SiteQuality
SIO_000300: -8.939999999999999e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4100
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8665
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.320185614849188e-5
allele num: 43100
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South Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.833e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.81e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

FS
type: SiteQuality
SIO_000300: 9.454000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.057e-1

QD
type: SiteQuality
SIO_000300: 1.478e1

DP
type: SiteQuality
SIO_000300: 1.760452e6

South Asian
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allele count: 1635
allele frequency: 1.700291181364393e-1
allele num: 9616
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European (Non-Finnish)
type: Population
allele count: 5199
allele frequency: 1.162801100400349e-1
allele num: 44711
num of homozygotes: 198

Other
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allele count: 74
allele frequency: 1.243697478991597e-1
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East Asian
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allele count: 829
allele frequency: 1.339256865912762e-1
allele num: 6190
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African
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allele count: 3550
allele frequency: 4.3092983733916e-1
allele num: 8238
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European (Finnish)
type: Population
allele count: 539
allele frequency: 1.249420491423273e-1
allele num: 4314
num of homozygotes: 23

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.508999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.653715e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.37e-1

QD
type: SiteQuality
SIO_000300: 1.895e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.81e0

MQ
type: SiteQuality
SIO_000300: 6.014e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4306
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Latino
type: Population
allele count: 0
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allele num: 8668
num of homozygotes: 0

Other
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allele count: 0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6099
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European (Non-Finnish)
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allele count: 2
allele frequency: 4.507753335737469e-5
allele num: 44368
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

VQSLOD
type: SiteQuality
SIO_000300: -4.699e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.614e1

DP
type: SiteQuality
SIO_000300: 1.473512e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8091
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 589
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6029
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.276504200150249e-5
allele num: 43927
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4285
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.548e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.423466e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.296e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8615
num of homozygotes: 0

Other
type: Population
allele count: 0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43891
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6018
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South Asian
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allele count: 1
allele frequency: 1.059658789869662e-4
allele num: 9437
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.035e1

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

QD
type: SiteQuality
SIO_000300: 1.555e1

DP
type: SiteQuality
SIO_000300: 1.422526e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

Latino
type: Population
allele count: 3
allele frequency: 3.525678693148431e-4
allele num: 8509
num of homozygotes: 0

African
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allele count: 56
allele frequency: 6.996501749125437e-3
allele num: 8004
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 579
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43093
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South Asian
type: Population
allele count: 0
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allele num: 9336
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FS
type: SiteQuality
SIO_000300: 1.668e0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

QD
type: SiteQuality
SIO_000300: 1.682e1

DP
type: SiteQuality
SIO_000300: 1.354399e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.89e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.949e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.42e-1

MQ
type: SiteQuality
SIO_000300: 5.994e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9327
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.641125008702109e-5
allele num: 43093
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African
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5897
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 578
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

QD
type: SiteQuality
SIO_000300: 2.423e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

DP
type: SiteQuality
SIO_000300: 1.352651e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.91e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.212e0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9304
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4242
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African
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East Asian
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allele count: 0
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Latino
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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allele num: 578
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MQ
type: SiteQuality
SIO_000300: 6.093e1

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.339989e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 3.005e1

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4223
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 42614
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Other
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.320759e6

FS
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.323e0

Other
type: Population
allele count: 0
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allele num: 552
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European (Non-Finnish)
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allele count: 0
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African
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South Asian
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allele count: 2
allele frequency: 2.230151650312221e-4
allele num: 8968
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5607
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.997e1

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

DP
type: SiteQuality
SIO_000300: 1.272631e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4107
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Other
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allele count: 0
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allele num: 552
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East Asian
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allele count: 18
allele frequency: 3.233339320998743e-3
allele num: 5567
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8931
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40691
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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QD
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SIO_000300: 1.748e1

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

DP
type: SiteQuality
SIO_000300: 1.2716e6

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.345043463547725e-5
allele num: 47281
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

African
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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allele num: 605
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East Asian
type: Population
allele count: 0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 8106
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MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

FS
type: SiteQuality
SIO_000300: 5.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e-1

QD
type: SiteQuality
SIO_000300: 1.454e1

DP
type: SiteQuality
SIO_000300: 1.959632e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9159
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8223
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 605
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6579
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

DP
type: SiteQuality
SIO_000300: 1.964496e6

FS
type: SiteQuality
SIO_000300: 4.682e0

VQSLOD
type: SiteQuality
SIO_000300: 4.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8537
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.363953742090334e-4
allele num: 9166
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.598e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.973338e6

MQ
type: SiteQuality
SIO_000300: 5.941e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8537
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8489
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

DP
type: SiteQuality
SIO_000300: 1.973338e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.267e1

VQSLOD
type: SiteQuality
SIO_000300: 6.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.598e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8491
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.517450682852807e-4
allele num: 6590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 1.97841e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.47e0

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

FS
type: SiteQuality
SIO_000300: 1.377e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.35e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8499
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9465
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.679049657893632e-4
allele num: 47646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

QD
type: SiteQuality
SIO_000300: 2.366e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.476e-1

DP
type: SiteQuality
SIO_000300: 1.997334e6

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.889e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.099252666050886e-5
allele num: 47636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6583
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9166
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.485e0

VQSLOD
type: SiteQuality
SIO_000300: 6.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

QD
type: SiteQuality
SIO_000300: 1.413e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.646e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 1.996428e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

African
type: Population
allele count: 1
allele frequency: 1.176609012825038e-4
allele num: 8499
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4515
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.667e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 1.227e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.999e0

DP
type: SiteQuality
SIO_000300: 1.99562e6

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47499
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8483
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

Latino
type: Population
allele count: 26
allele frequency: 2.841840638321128e-3
allele num: 9149
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
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DP
type: SiteQuality
SIO_000300: 1.986061e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

QD
type: SiteQuality
SIO_000300: 1.521e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.67e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.186748305270064e-4
allele num: 9146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9233
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

FS
type: SiteQuality
SIO_000300: 1.1016e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.381e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

DP
type: SiteQuality
SIO_000300: 1.979387e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

QD
type: SiteQuality
SIO_000300: 1.499e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6523
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46959
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.182872013248167e-4
allele num: 8454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8895
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.069e1

DP
type: SiteQuality
SIO_000300: 1.936234e6

MQRankSum
type: SiteQuality
SIO_000300: 9.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.087e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.516e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.08e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9093
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 613
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46840
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.130965844831486e-4
allele num: 8842
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6511
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4484
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

DP
type: SiteQuality
SIO_000300: 1.92474e6

FS
type: SiteQuality
SIO_000300: 4.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

QD
type: SiteQuality
SIO_000300: 3.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.863e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.184834123222749e-4
allele num: 8440
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.100231048520189e-4
allele num: 9089
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46765
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.136751165169944e-4
allele num: 8797
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.98e0

FS
type: SiteQuality
SIO_000300: 1.891e0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.44e-1

DP
type: SiteQuality
SIO_000300: 1.918288e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.54e-1

QD
type: SiteQuality
SIO_000300: 2.466e1

Latino
type: Population
allele count: 1
allele frequency: 1.102535832414554e-4
allele num: 9070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.146659797355315e-5
allele num: 46584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6493
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.591e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.459e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

DP
type: SiteQuality
SIO_000300: 1.898265e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.14e-2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7571
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.384476534296029e-4
allele num: 8864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6241
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 1.607071e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

QD
type: SiteQuality
SIO_000300: 2.083e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.272830583208328e-5
allele num: 43998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 573
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4331
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7357
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

DP
type: SiteQuality
SIO_000300: 1.571787e6

QD
type: SiteQuality
SIO_000300: 1.92e1

VQSLOD
type: SiteQuality
SIO_000300: -1.785e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.811e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.505e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4292
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.148765077541643e-4
allele num: 8705
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43327
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
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DP
type: SiteQuality
SIO_000300: 1.554839e6

MQ
type: SiteQuality
SIO_000300: 5.93e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.437e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.067e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.9e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.133970679242867e-5
allele num: 46861
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8453
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 2.105388e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.226e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.254e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7255
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9161
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 585
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.132878319291884e-5
allele num: 46885
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DP
type: SiteQuality
SIO_000300: 2.110111e6

MQ
type: SiteQuality
SIO_000300: 4.04e1

QD
type: SiteQuality
SIO_000300: 5.76e0

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8457
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9165
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7272
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.506e0

MQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 3.394e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.485e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.110932e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.47e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.131014789242637e-5
allele num: 46926
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.182453077258839e-4
allele num: 9164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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South Asian
type: Population
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allele num: 7326
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QD
type: SiteQuality
SIO_000300: 1.411e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

FS
type: SiteQuality
SIO_000300: 4.518e0

DP
type: SiteQuality
SIO_000300: 2.113125e6

MQRankSum
type: SiteQuality
SIO_000300: 9.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.182452406290647e-4
allele num: 8457
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 589
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QD
type: SiteQuality
SIO_000300: 1.185e1

FS
type: SiteQuality
SIO_000300: 1.472e0

MQRankSum
type: SiteQuality
SIO_000300: 5.49e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 2.113196e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
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South Asian
type: Population
allele count: 2
allele frequency: 2.707459049681874e-4
allele num: 7387
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8457
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46949
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Latino
type: Population
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allele num: 9166
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e0

QD
type: SiteQuality
SIO_000300: 1.802e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQ
type: SiteQuality
SIO_000300: 5.93e1

DP
type: SiteQuality
SIO_000300: 2.115031e6

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

VQSLOD
type: SiteQuality
SIO_000300: -1.507e0

FS
type: SiteQuality
SIO_000300: 7.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.79e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.326259946949602e-4
allele num: 7540
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Other
type: Population
allele count: 0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47029
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.675e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.855e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7552
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European (Non-Finnish)
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allele count: 2
allele frequency: 4.25133917183913e-5
allele num: 47044
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 596
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.396e0

QD
type: SiteQuality
SIO_000300: 2.039e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

FS
type: SiteQuality
SIO_000300: 3.55e0

VQSLOD
type: SiteQuality
SIO_000300: -6.998e-1

DP
type: SiteQuality
SIO_000300: 2.121547e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8465
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
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South Asian
type: Population
allele count: 0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47145
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.058e0

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

FS
type: SiteQuality
SIO_000300: 3.476e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 2.127374e6

MQ
type: SiteQuality
SIO_000300: 5.92e1

QD
type: SiteQuality
SIO_000300: 1.521e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9181
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8481
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.106504887091338e-5
allele num: 47472
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FS
type: SiteQuality
SIO_000300: 5.21e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-2

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 617
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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African
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allele count: 0
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East Asian
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allele count: 3
allele frequency: 4.548211036992117e-4
allele num: 6596
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
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MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-2

QD
type: SiteQuality
SIO_000300: 1.67e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-2

DP
type: SiteQuality
SIO_000300: 2.152536e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.102607232968881e-5
allele num: 47560
num of homozygotes: 0

Latino
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East Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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allele num: 621
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DP
type: SiteQuality
SIO_000300: 2.159149e6

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.43e-2

QD
type: SiteQuality
SIO_000300: 2.967e1

FS
type: SiteQuality
SIO_000300: 0.0e0

South Asian
type: Population
allele count: 0
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allele num: 9493
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East Asian
type: Population
allele count: 1
allele frequency: 1.514463122822959e-4
allele num: 6603
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9193
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
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VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

QD
type: SiteQuality
SIO_000300: 2.371e1

DP
type: SiteQuality
SIO_000300: 2.167444e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 1.662e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.82e-2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6603
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.096611875209661e-5
allele num: 47696
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African
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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allele num: 629
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.368e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.58e0

MQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
SIO_000300: 2.169536e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

East Asian
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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Latino
type: Population
allele count: 1
allele frequency: 1.089205968848709e-4
allele num: 9181
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47730
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

FS
type: SiteQuality
SIO_000300: 4.773e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

DP
type: SiteQuality
SIO_000300: 2.17305e6

Other
type: Population
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allele num: 627
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African
type: Population
allele count: 1
allele frequency: 1.179384361363368e-4
allele num: 8479
num of homozygotes: 0

South Asian
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6597
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.197095609837992e-5
allele num: 47652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 2.299e1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: -1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.01e-2

DP
type: SiteQuality
SIO_000300: 2.162592e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

MQ
type: SiteQuality
SIO_000300: 5.857e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e0

FS
type: SiteQuality
SIO_000300: 2.7e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9193
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9153
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.111174446344501e-5
allele num: 47367
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.904e1

FS
type: SiteQuality
SIO_000300: 2.767e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.127e0

DP
type: SiteQuality
SIO_000300: 2.130279e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9145
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.116043844428456e-5
allele num: 47258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8455
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6559
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9079
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

MQ
type: SiteQuality
SIO_000300: 5.777e1

VQSLOD
type: SiteQuality
SIO_000300: -2.919e-1

FS
type: SiteQuality
SIO_000300: 7.949e0

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

QD
type: SiteQuality
SIO_000300: 1.509e1

DP
type: SiteQuality
SIO_000300: 2.12314e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9087
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6503
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.142520461070403e-5
allele num: 46674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 4.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.72e-1

DP
type: SiteQuality
SIO_000300: 2.071665e6

QD
type: SiteQuality
SIO_000300: 1.035e1

MQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6429
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4463
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46007
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 8.56e-1

DP
type: SiteQuality
SIO_000300: 2.022366e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

QD
type: SiteQuality
SIO_000300: 1.575e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4383
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8133
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7525
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-2

MQ
type: SiteQuality
SIO_000300: 5.89e1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-2

DP
type: SiteQuality
SIO_000300: 1.98014e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

QD
type: SiteQuality
SIO_000300: 2.456e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.24e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4071
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.346977093503567e-5
allele num: 42608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8721
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 539
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6653
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.823e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.088e0

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

QD
type: SiteQuality
SIO_000300: 6.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.880333e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8759
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7017
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.278994507623237e-5
allele num: 43879
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

MQ
type: SiteQuality
SIO_000300: 6.019e1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.92e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.612e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

DP
type: SiteQuality
SIO_000300: 1.611338e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.475e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

European (Finnish)
type: Population
allele count: 706
allele frequency: 1.640334572490706e-1
allele num: 4304
num of homozygotes: 35

East Asian
type: Population
allele count: 1177
allele frequency: 1.92194644023514e-1
allele num: 6124
num of homozygotes: 81

Other
type: Population
allele count: 85
allele frequency: 1.528776978417266e-1
allele num: 556
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African
type: Population
allele count: 3708
allele frequency: 4.594795539033457e-1
allele num: 8070
num of homozygotes: 658

South Asian
type: Population
allele count: 1358
allele frequency: 1.935299985748896e-1
allele num: 7017
num of homozygotes: 67

European (Non-Finnish)
type: Population
allele count: 6283
allele frequency: 1.43189224913968e-1
allele num: 43879
num of homozygotes: 296

VQSLOD
type: SiteQuality
SIO_000300: 6.92e0

MQ
type: SiteQuality
SIO_000300: 6.019e1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

QD
type: SiteQuality
SIO_000300: 1.612e1

DP
type: SiteQuality
SIO_000300: 1.611338e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.475e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7017
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43879
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.239157372986369e-4
allele num: 8070
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.475e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

MQ
type: SiteQuality
SIO_000300: 6.019e1

QD
type: SiteQuality
SIO_000300: 1.612e1

DP
type: SiteQuality
SIO_000300: 1.611338e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7017
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8070
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.632919660352711e-4
allele num: 6124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.557989015246473e-5
allele num: 43879
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
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DP
type: SiteQuality
SIO_000300: 1.611338e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.92e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.475e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

MQ
type: SiteQuality
SIO_000300: 6.019e1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

QD
type: SiteQuality
SIO_000300: 1.612e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.30821559392988e-4
allele num: 7644
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 519
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.026e-1

QD
type: SiteQuality
SIO_000300: 7.08e0

DP
type: SiteQuality
SIO_000300: 1.258784e6

MQRankSum
type: SiteQuality
SIO_000300: 5.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.536e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.126e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40263
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 491
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East Asian
type: Population
allele count: 1
allele frequency: 1.792114695340502e-4
allele num: 5580
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.34517083669626e-3
allele num: 7434
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.412254251598118e-4
allele num: 8291
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4065
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

FS
type: SiteQuality
SIO_000300: 1.143e0

DP
type: SiteQuality
SIO_000300: 1.184459e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.817e1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.335791189121316e-4
allele num: 37431
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3901
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
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African
type: Population
allele count: 1
allele frequency: 1.406469760900141e-4
allele num: 7110
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 5.246589716684155e-4
allele num: 7624
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.860258637328701e-4
allele num: 5181
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

FS
type: SiteQuality
SIO_000300: 2.485e0

QD
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

DP
type: SiteQuality
SIO_000300: 1.16489e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.236e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7624
num of homozygotes: 0

African
type: Population
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5181
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European (Finnish)
type: Population
allele count: 1
allele frequency: 2.563445270443476e-4
allele num: 3901
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37431
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
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MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

DP
type: SiteQuality
SIO_000300: 1.16489e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

QD
type: SiteQuality
SIO_000300: 8.100000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 2.485e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.236e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8433
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46823
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6603
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.659e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

QD
type: SiteQuality
SIO_000300: 1.71e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

FS
type: SiteQuality
SIO_000300: 1.849e0

MQRankSum
type: SiteQuality
SIO_000300: 9.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

DP
type: SiteQuality
SIO_000300: 3.348431e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8435
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.267212869914016e-5
allele num: 46869
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

FS
type: SiteQuality
SIO_000300: 1.3765e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

QD
type: SiteQuality
SIO_000300: 1.899e1

DP
type: SiteQuality
SIO_000300: 3.353206e6

VQSLOD
type: SiteQuality
SIO_000300: -4.866e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.133606434957008e-5
allele num: 46869
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6607
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

QD
type: SiteQuality
SIO_000300: 1.118e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 3.353647e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.888e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.380262249827467e-4
allele num: 7245
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.662887377173091e-3
allele num: 6615
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.51e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

DP
type: SiteQuality
SIO_000300: 3.359438e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

QD
type: SiteQuality
SIO_000300: 1.548e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.18e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6615
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7371
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9289
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.063512996128813e-4
allele num: 47014
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

VQSLOD
type: SiteQuality
SIO_000300: -2.16e-1

FS
type: SiteQuality
SIO_000300: 3.042e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.62e-2

QD
type: SiteQuality
SIO_000300: 2.157e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.73e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

DP
type: SiteQuality
SIO_000300: 3.361518e6