X-150868631-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868631
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868631
    reference: chr 0
allele count: 1
allele frequency: 1.160442824982013e-5
allele num: 86174
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+3A>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.195A>G
  hgvsp: ENST00000370354.1:c.195A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+3A>G
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 252
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3886
  bin: 6.75e1
  variant carriers: 0
hgvs: c.168+3A>G
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: FS

X-150868639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868639
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868639
    reference: chr 0
allele count: 10
allele frequency: 1.175696012039127e-4
allele num: 85056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.203C>T
  hgvsp: ENSP00000359379.1:p.Thr68Ile
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+11C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+11C>T
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 156
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  variant carriers: 0
hgvs: p.Thr68Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

X-150868640-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868640
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868640
    reference: chr 0
allele count: 20
allele frequency: 2.354880489815142e-4
allele num: 84930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+12C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+12C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.204C>T
  hgvsp: ENST00000370354.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr68Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

X-150868646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868646
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868646
    reference: chr 0
allele count: 4
allele frequency: 4.780628891730707e-5
allele num: 83671
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.210G>A
  hgvsp: ENST00000370354.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+18G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+18G>A
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 4
hgvs: p.Gly70Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ

X-150868649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868649
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868649
    reference: chr 0
allele count: 1
allele frequency: 1.205196808638851e-5
allele num: 82974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+21G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+21G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.213G>A
  hgvsp: ENST00000370354.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu71Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

X-150868649-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868649
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868649
    reference: chr 0
allele count: 1
allele frequency: 1.205196808638851e-5
allele num: 82974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.213G>T
  hgvsp: ENST00000370354.1:c.213G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+21G>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+21G>T
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 42203
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu71Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP

X-150868650-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868650
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868650
    reference: chr 0
allele count: 1031
allele frequency: 1.246810414676325e-2
allele num: 82691
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+22G>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+22G>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.214G>T
  hgvsp: ENSP00000359379.1:p.Val72Phe
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
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  variant carriers: 90
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 4
hgvs: p.Val72Phe
num of homozygotes: 58
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD

X-150868651-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868651
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868651
    reference: chr 0
allele count: 1
allele frequency: 1.209511599216236e-5
allele num: 82678
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+23T>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.215T>G
  hgvsp: ENSP00000359379.1:p.Val72Gly
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+23T>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 31937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val72Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

X-150868655-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868655
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868655
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 81118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.219G>C
  hgvsp: ENST00000370354.1:c.219G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+27G>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+27G>C
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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hgvs: p.Leu73Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

X-150868669-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868669
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868669
    reference: chr 0
allele count: 1
allele frequency: 1.307018690367272e-5
allele num: 76510
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+41C>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.233C>A
  hgvsp: ENSP00000359379.1:p.Ala78Asp
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+41C>A
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala78Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

X-150868675-GAAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868675
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868672
    reference: chr 0
allele count: 3
allele frequency: 4.095842719639566e-5
allele num: 73245
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+49_168+51delATA
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+49_168+51delATA
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.241_243delATA
  hgvsp: ENSP00000359379.1:p.Ile81del
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2784
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ile81del
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: GAAT
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

X-150868678-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868678
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868678
    reference: chr 0
allele count: 3
allele frequency: 4.119181655911026e-5
allele num: 72830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+50T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+50T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.242T>C
  hgvsp: ENSP00000359379.1:p.Ile81Thr
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 977
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ile81Thr
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

X-150868687-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868687
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868687
    reference: chr 0
allele count: 8
allele frequency: 1.158765335534987e-4
allele num: 69039
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+59C>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.251C>A
  hgvsp: ENSP00000359379.1:p.Thr84Lys
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+59C>A
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr84Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

X-150868691-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868691
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868691
    reference: chr 0
allele count: 1
allele frequency: 1.48583994532109e-5
allele num: 67302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+63C>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.255C>A
  hgvsp: ENST00000370354.1:c.255C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+63C>A
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly85Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

X-150868691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868691
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868691
    reference: chr 0
allele count: 7
allele frequency: 1.040087961724763e-4
allele num: 67302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+63C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.255C>T
  hgvsp: ENST00000370354.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+63C>T
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Gly85Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
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site quality: DP
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X-150868692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868692
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868692
    reference: chr 0
allele count: 1
allele frequency: 1.505230676601189e-5
allele num: 66435
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+64C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.256C>T
  hgvsp: ENSP00000359379.1:p.Pro86Ser
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+64C>T
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 114
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro86Ser
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
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site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
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site quality: MQ

X-150868699-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868699
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868699
    reference: chr 0
allele count: 1
allele frequency: 1.575547502757208e-5
allele num: 63470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+71A>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.263A>G
  hgvsp: ENSP00000359379.1:p.Asn88Ser
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+71A>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn88Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum

X-150868702-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868702
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868702
    reference: chr 0
allele count: 1
allele frequency: 1.627816121890871e-5
allele num: 61432
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.266C>G
  hgvsp: ENSP00000359379.1:p.Ala89Gly
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+74C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+74C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala89Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

X-150868703-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868703
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868703
    reference: chr 0
allele count: 2
allele frequency: 3.247544044816108e-5
allele num: 61585
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.267A>G
  hgvsp: ENST00000370354.1:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+75A>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+75A>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala89Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: A
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

X-150868704-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868704
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868704
    reference: chr 0
allele count: 1
allele frequency: 1.625936946165228e-5
allele num: 61503
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+76G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.268G>A
  hgvsp: ENSP00000359379.1:p.Asp90Asn
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+76G>A
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4606
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Asp90Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
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site quality: ClippingRankSum
site quality: VQSLOD
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site quality: DP
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X-150868711-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868711
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868711
    reference: chr 0
allele count: 32
allele frequency: 5.450519502640096e-4
allele num: 58710
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+83C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+83C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.275C>G
  hgvsp: ENSP00000359379.1:p.Ser92Ter
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4021
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 3.75e1
  variant carriers: 5
hgvs: p.Ser92Ter
num of homozygotes: 2
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

X-150868724-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868724
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868724
    reference: chr 0
allele count: 10592
allele frequency: 1.9732478855397e-1
allele num: 53678
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+96A>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.288A>G
  hgvsp: ENST00000370354.1:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+96A>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
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  variant carriers: 165
genotype depth: GenotypeDepth
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  variant carriers: 10
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 3373
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 364
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 332
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 104
genotype depth: GenotypeDepth
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  variant carriers: 2535
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 2578
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 1586
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 228
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 437
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 240
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 453
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 302
genotype quality: GenotypeQuality
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  variant carriers: 872
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 170
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 330
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 7.25e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 2582
  bin: 1.75e1
  variant carriers: 773
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.25e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 8.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 20768
  bin: 2.25e1
  variant carriers: 920
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 702
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 112
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 5.25e1
  variant carriers: 369
genotype quality: GenotypeQuality
  all individuals: 6757
  bin: 9.75e1
  variant carriers: 5783
hgvs: p.Lys96Lys
num of homozygotes: 1505
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

X-150868729-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868729
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868729
    reference: chr 0
allele count: 1
allele frequency: 2.058206067591487e-5
allele num: 48586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+101C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+101C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.293C>T
  hgvsp: ENSP00000359379.1:p.Thr98Ile
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15308
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2455
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr98Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

X-150868735-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868735
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868735
    reference: chr 0
allele count: 1
allele frequency: 2.151972282597e-5
allele num: 46469
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.299C>G
  hgvsp: ENSP00000359379.1:p.Pro100Arg
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+107C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+107C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20723
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro100Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS

X-150868739-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868739
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868739
    reference: chr 0
allele count: 49
allele frequency: 1.076568164341426e-3
allele num: 45515
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+111G>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.303G>C
  hgvsp: ENSP00000359379.1:p.Lys101Asn
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+111G>C
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
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  variant carriers: 16
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
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  variant carriers: 0
hgvs: p.Lys101Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

X-150868743-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868743
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868743
    reference: chr 0
allele count: 9
allele frequency: 2.010140039756103e-4
allele num: 44773
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+115T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+115T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.307T>C
  hgvsp: ENSP00000359379.1:p.Ter103GlnextTer9
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ter103GlnextTer9
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

X-150868749-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868749
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868749
    reference: chr 0
allele count: 63
allele frequency: 1.453287197231834e-3
allele num: 43350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+121C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+121C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*4C>T
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

X-150868751-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868751
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868751
    reference: chr 0
allele count: 1
allele frequency: 2.317443396445042e-5
allele num: 43151
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+123A>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*6A>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+123A>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
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site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
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site quality: ClippingRankSum

X-150868760-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868760
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868760
    reference: chr 0
allele count: 1
allele frequency: 2.43060619318458e-5
allele num: 41142
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+132A>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+132A>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*15A>T
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

X-150868761-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868761
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868761
    reference: chr 0
allele count: 1995
allele frequency: 4.876677503727786e-2
allele num: 40909
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+133C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*16C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+133C>T
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
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  variant carriers: 786
genotype depth: GenotypeDepth
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  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 498
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 222
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 3.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 20425
  bin: 7.5e0
  variant carriers: 866
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 2.25e1
  variant carriers: 253
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 2.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 7.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 3.25e1
  variant carriers: 128
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 1.25e1
  variant carriers: 136
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 1.75e1
  variant carriers: 252
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 9.25e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 14225
  bin: 7.5e0
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 7.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 3.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 4.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 2.75e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 8.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 245
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 5.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 6.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 4.25e1
  variant carriers: 44
num of homozygotes: 77
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

X-150868762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868762
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868762
    reference: chr 0
allele count: 2
allele frequency: 4.937662017034934e-5
allele num: 40505
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+134G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*17G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+134G>A
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 650
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3353
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-150868766-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868766
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868766
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 40206
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+138C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*21C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+138C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

X-150868769-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868769
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868769
    reference: chr 0
allele count: 1
allele frequency: 2.490163852781513e-5
allele num: 40158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+141A>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+141A>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*24A>T
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

X-150868771-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868771
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868771
    reference: chr 0
allele count: 1
allele frequency: 2.499562576549104e-5
allele num: 40007
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+143A>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*26A>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+143A>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4093
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.*26A>G
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: QD

X-150868775-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868775
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868775
    reference: chr 0
allele count: 1
allele frequency: 2.517496601379588e-5
allele num: 39722
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+147T>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+147T>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
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  consequence: splice_donor_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
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  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*28+2T>G
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.*28+2T>G
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
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site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
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X-150868777-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868777
    reference: chr 0
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    type: ExactPosition
    position: 24150868777
    reference: chr 0
allele count: 2
allele frequency: 5.051653153494481e-5
allele num: 39591
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*28+4C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+149C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000130032
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  gene symbol: PRRG3
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  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: splice region
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genotype depth: GenotypeDepth
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hgvs: c.*28+4C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
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site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
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X-150868778-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868778
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868778
    reference: chr 0
allele count: 2
allele frequency: 5.033345916698125e-5
allele num: 39735
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+150G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+150G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*28+5G>A
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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hgvs: c.*28+5G>A
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
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population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
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X-150868779-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868779
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868779
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 39863
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+151T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+151T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
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  gene symbol: PRRG3
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  variant of: http://identifiers.org/hgnc/30798
canonical: false
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.*28+6T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
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site quality: FS
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X-150868780-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868780
    reference: chr 0
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    type: ExactPosition
    position: 24150868780
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 39914
alternate allele: G
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
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  gene symbol: PRRG3
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  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
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  gene symbol: PRRG3
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  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
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  variant of: http://identifiers.org/hgnc/30798
canonical: false
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genotype quality: GenotypeQuality
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hgvs: c.*28+7A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP

X-150868782-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868782
    reference: chr 0
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    type: ExactPosition
    position: 24150868782
    reference: chr 0
allele count: 11
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allele num: 40089
alternate allele: C
annotation: Annotation
  canonical: false
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  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
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  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/30798
canonical: true
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population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
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X-150868785-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868785
    reference: chr 0
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    type: ExactPosition
    position: 24150868785
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 40076
alternate allele: T
annotation: Annotation
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  ensembl protein: ENSP00000359379
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  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
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  ensembl protein: ENSP00000440217
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  hgvsc: ENST00000538575.1:c.168+157C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/30798
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population: Latino
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X-150868786-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868786
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868786
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allele count: 0
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allele num: 40104
alternate allele: T
annotation: Annotation
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  gene symbol: PRRG3
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  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000130032
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  gene symbol: PRRG3
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  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3607
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

X-150868787-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868787
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868787
    reference: chr 0
allele count: 1
allele frequency: 2.485336514564072e-5
allele num: 40236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+159C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*28+14C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+159C>T
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
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site quality: QD

X-150868788-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868788
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868787
    reference: chr 0
allele count: 1
allele frequency: 2.462447672986949e-5
allele num: 40610
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+162delT
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+162delT
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
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  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*28+17delT
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: AT
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
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site quality: DP

X-150868791-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868791
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868791
    reference: chr 0
allele count: 2
allele frequency: 4.910867750331483e-5
allele num: 40726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.168+163G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*28+18G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.168+163G>A
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
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X-150868943-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868943
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868943
    reference: chr 0
allele count: 1
allele frequency: 1.245283488786222e-5
allele num: 80303
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-35T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-35T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-35T>C
  variant of: http://identifiers.org/hgnc/30798
canonical: true
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filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

X-150868946-GCTTCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868946
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868941
    reference: chr 0
allele count: 1
allele frequency: 1.244833939152517e-5
allele num: 80332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-28_*29-24delCTCTT
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-28_169-24delCTCTT
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-28_169-24delCTCTT
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3189
  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: GCTTCT
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-150868950-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868950
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868950
    reference: chr 0
allele count: 1
allele frequency: 1.244214403025929e-5
allele num: 80372
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-28C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-28C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-28C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3801
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
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site quality: ClippingRankSum

X-150868952-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868952
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868952
    reference: chr 0
allele count: 1
allele frequency: 1.243904866155836e-5
allele num: 80392
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-26C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-26C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-26C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

X-150868953-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868953
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868953
    reference: chr 0
allele count: 3
allele frequency: 3.731436105375756e-5
allele num: 80398
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-25T>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-25T>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-25T>G
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 239
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-150868954-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868954
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868954
    reference: chr 0
allele count: 1
allele frequency: 1.243750155468769e-5
allele num: 80402
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-24T>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
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  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-24T>A
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
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X-150868959-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868959
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868958
    reference: chr 0
allele count: 1
allele frequency: 1.242251456539833e-5
allele num: 80499
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-17delC
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-17delC
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-17delC
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: AC
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

X-150868963-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868963
    reference: chr 0
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    type: ExactPosition
    position: 24150868963
    reference: chr 0
allele count: 1
allele frequency: 1.240771760034742e-5
allele num: 80595
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-15C>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-15C>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
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  ensembl protein: ENSP00000359378
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  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

X-150868963-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868963
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868963
    reference: chr 0
allele count: 13
allele frequency: 1.613003288045164e-4
allele num: 80595
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-15C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-15C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
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  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
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  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-15C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-150868969-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868969
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868969
    reference: chr 0
allele count: 1
allele frequency: 1.238911739927648e-5
allele num: 80716
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-9C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-9C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-9C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1907
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 32408
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

X-150868974-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150868974
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150868974
    reference: chr 0
allele count: 2
allele frequency: 2.473563787026158e-5
allele num: 80855
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*29-4G>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.169-4G>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.169-4G>C
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 41
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hgvs: c.169-4G>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

X-150869000-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869000
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869000
    reference: chr 0
allele count: 2
allele frequency: 2.43261652233142e-5
allele num: 82216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.191C>G
  hgvsp: ENSP00000440217.1:p.Pro64Arg
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.191C>G
  hgvsp: ENSP00000359378.3:p.Pro64Arg
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*51C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 504
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7709
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hgvs: p.Pro64Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

X-150869008-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869008
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869008
    reference: chr 0
allele count: 1
allele frequency: 1.208138017687141e-5
allele num: 82772
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.199G>T
  hgvsp: ENSP00000359378.3:p.Val67Phe
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*59G>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.199G>T
  hgvsp: ENSP00000440217.1:p.Val67Phe
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Val67Phe
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

X-150869010-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869010
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869010
    reference: chr 0
allele count: 1
allele frequency: 1.207058880332183e-5
allele num: 82846
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.201C>G
  hgvsp: ENST00000370353.3:c.201C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.201C>G
  hgvsp: ENST00000538575.1:c.201C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*61C>G
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val67Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
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site quality: BaseQRankSum

X-150869020-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869020
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869020
    reference: chr 0
allele count: 1
allele frequency: 1.197002705226114e-5
allele num: 83542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*71C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.211C>T
  hgvsp: ENSP00000359378.3:p.Arg71Ter
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.211C>T
  hgvsp: ENSP00000440217.1:p.Arg71Ter
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Arg71Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
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X-150869021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869021
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869021
    reference: chr 0
allele count: 17
allele frequency: 2.029366121523218e-4
allele num: 83770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*72G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.212G>A
  hgvsp: ENSP00000359378.3:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.212G>A
  hgvsp: ENSP00000440217.1:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Arg71Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
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site quality: VQSLOD
site quality: QD
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site quality: DP

X-150869023-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869023
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869023
    reference: chr 0
allele count: 4
allele frequency: 4.7666714333381e-5
allele num: 83916
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.214G>T
  hgvsp: ENSP00000359378.3:p.Asp72Tyr
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.214G>T
  hgvsp: ENSP00000440217.1:p.Asp72Tyr
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*74G>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
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  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.1G>T
  hgvsp: ENSP00000394121.1:p.Asp1?
  variant of: http://identifiers.org/hgnc/30798
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4053
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Asp1?
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
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site quality: QD
site quality: FS
site quality: InbreedingCoeff
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X-150869030-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869030
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869030
    reference: chr 0
allele count: 3
allele frequency: 3.553870757566783e-5
allele num: 84415
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.8C>T
  hgvsp: ENSP00000394121.1:p.Ser3Leu
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.221C>T
  hgvsp: ENSP00000440217.1:p.Ser74Leu
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.221C>T
  hgvsp: ENSP00000359378.3:p.Ser74Leu
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*81C>T
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4015
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser74Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

X-150869031-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869031
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869031
    reference: chr 0
allele count: 1
allele frequency: 1.182382500738989e-5
allele num: 84575
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.222G>A
  hgvsp: ENST00000538575.1:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.9G>A
  hgvsp: ENST00000448324.1:c.9G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.222G>A
  hgvsp: ENST00000370353.3:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*82G>A
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8803
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genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 85
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1530
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genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser74Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff

X-150869032-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869032
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869032
    reference: chr 0
allele count: 1
allele frequency: 1.181628047123327e-5
allele num: 84629
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.223C>G
  hgvsp: ENSP00000359378.3:p.Gln75Glu
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.10C>G
  hgvsp: ENSP00000394121.1:p.Gln4Glu
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*83C>G
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.223C>G
  hgvsp: ENSP00000440217.1:p.Gln75Glu
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2627
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genotype depth: GenotypeDepth
  all individuals: 746
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genotype depth: GenotypeDepth
  all individuals: 197
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
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genotype depth: GenotypeDepth
  all individuals: 3565
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 194
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genotype quality: GenotypeQuality
  all individuals: 78
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln75Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

X-150869044-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869044
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869043
    reference: chr 0
allele count: 2
allele frequency: 2.339810709313617e-5
allele num: 85477
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.237delC
  hgvsp: ENSP00000440217.1:p.Met80CysfsTer13
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.237delC
  hgvsp: ENSP00000359378.3:p.Met80CysfsTer13
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.24delC
  hgvsp: ENSP00000394121.1:p.Met9CysfsTer13
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*97delC
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 64
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genotype quality: GenotypeQuality
  all individuals: 6
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  variant carriers: 0
hgvs: p.Met80CysfsTer13
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: GC
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

X-150869052-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869052
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869052
    reference: chr 0
allele count: 1
allele frequency: 1.16266902300922e-5
allele num: 86009
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*103T>C
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.243T>C
  hgvsp: ENST00000538575.1:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.30T>C
  hgvsp: ENST00000448324.1:c.30T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.243T>C
  hgvsp: ENST00000370353.3:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4977
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5556
  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 191
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1828
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genotype quality: GenotypeQuality
  all individuals: 10213
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr81Tyr
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

X-150869089-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869089
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869089
    reference: chr 0
allele count: 3
allele frequency: 3.436504845471832e-5
allele num: 87298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.67G>A
  hgvsp: ENSP00000394121.1:p.Val23Ile
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*140G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.280G>A
  hgvsp: ENSP00000440217.1:p.Val94Ile
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.280G>A
  hgvsp: ENSP00000359378.3:p.Val94Ile
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val94Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

X-150869094-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869094
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869094
    reference: chr 0
allele count: 25
allele frequency: 2.863229264493666e-4
allele num: 87314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.72C>T
  hgvsp: ENST00000448324.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.285C>T
  hgvsp: ENST00000370353.3:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.285C>T
  hgvsp: ENST00000538575.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*145C>T
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2725
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hgvs: p.Ile95Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

X-150869095-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869095
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869095
    reference: chr 0
allele count: 2
allele frequency: 2.290294875465216e-5
allele num: 87325
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.286G>A
  hgvsp: ENSP00000359378.3:p.Ala96Thr
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*146G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.73G>A
  hgvsp: ENSP00000394121.1:p.Ala25Thr
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.286G>A
  hgvsp: ENSP00000440217.1:p.Ala96Thr
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala96Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-150869100-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869100
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869100
    reference: chr 0
allele count: 1
allele frequency: 1.144819690898684e-5
allele num: 87350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.78G>A
  hgvsp: ENST00000448324.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.291G>A
  hgvsp: ENST00000538575.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.291G>A
  hgvsp: ENST00000370353.3:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*151G>A
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu97Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

X-150869110-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869110
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869110
    reference: chr 0
allele count: 13
allele frequency: 1.488299674863763e-4
allele num: 87348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.88T>C
  hgvsp: ENSP00000394121.1:p.Trp30Arg
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.301T>C
  hgvsp: ENSP00000440217.1:p.Trp101Arg
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.301T>C
  hgvsp: ENSP00000359378.3:p.Trp101Arg
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*161T>C
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 32392
  bin: 9.75e1
  variant carriers: 13
hgvs: p.Trp101Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
reference allele: T
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

X-150869124-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869124
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869124
    reference: chr 0
allele count: 3
allele frequency: 3.437725600742549e-5
allele num: 87267
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.315G>A
  hgvsp: ENST00000538575.1:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*175G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.102G>A
  hgvsp: ENST00000448324.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.315G>A
  hgvsp: ENST00000370353.3:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Leu105Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-150869127-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869127
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869127
    reference: chr 0
allele count: 789
allele frequency: 9.04287629941204e-3
allele num: 87251
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*178G>A
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.318G>A
  hgvsp: ENST00000370353.3:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.318G>A
  hgvsp: ENST00000538575.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.105G>A
  hgvsp: ENST00000448324.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 16
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gln106Gln
num of homozygotes: 4
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

X-150869132-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869132
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869132
    reference: chr 0
allele count: 19
allele frequency: 2.17967396666246e-4
allele num: 87169
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.110C>T
  hgvsp: ENSP00000394121.1:p.Ala37Val
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.323C>T
  hgvsp: ENSP00000359378.3:p.Ala108Val
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*183C>T
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.323C>T
  hgvsp: ENSP00000440217.1:p.Ala108Val
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala108Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-150869137-CGTCACCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24150869137
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24150869130
    reference: chr 0
allele count: 1
allele frequency: 1.147947469923776e-5
allele num: 87112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000394121
  ensembl transcript: ENST00000448324
  gene symbol: PRRG3
  hgvsc: ENST00000448324.1:c.116_122delGTCACCA
  hgvsp: ENSP00000394121.1:p.Arg39ProfsTer41
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359378
  ensembl transcript: ENST00000370353
  gene symbol: PRRG3
  hgvsc: ENST00000370353.3:c.329_335delGTCACCA
  hgvsp: ENSP00000359378.3:p.Arg110ProfsTer10
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000359379
  ensembl transcript: ENST00000370354
  gene symbol: PRRG3
  hgvsc: ENST00000370354.1:c.*189_*195delGTCACCA
  variant of: http://identifiers.org/hgnc/30798
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130032
  ensembl protein: ENSP00000440217
  ensembl transcript: ENST00000538575
  gene symbol: PRRG3
  hgvsc: ENST00000538575.1:c.329_335delGTCACCA
  hgvsp: ENSP00000440217.1:p.Arg110ProfsTer10
  variant of: http://identifiers.org/hgnc/30798
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5032
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4242
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2937
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg110ProfsTer10
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: CGTCACCA

GenotypeQuality
all individuals: 104
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9237
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.029018316526034e-4
allele num: 9718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6557
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4464
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.88e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.63e-2

QD
type: SiteQuality
SIO_000300: 3.046e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 1.431831e6

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 701
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.539408866995074e-3
allele num: 6496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46634
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

MQRankSum
type: SiteQuality
SIO_000300: 4.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.402074e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.62e-2

QD
type: SiteQuality
SIO_000300: 1.541e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

GenotypeQuality
all individuals: 281
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46560
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.430428970713331e-3
allele num: 8229
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9495
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 595
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4401
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.884e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.47e-1

FS
type: SiteQuality
SIO_000300: 4.302e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.080000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.022e0

VQSLOD
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

DP
type: SiteQuality
SIO_000300: 1.399587e6

GenotypeQuality
all individuals: 746
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4333
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9289
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45813
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.918839153959665e-4
allele num: 8132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9081
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6435
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.032e0

DP
type: SiteQuality
SIO_000300: 1.364874e6

VQSLOD
type: SiteQuality
SIO_000300: -9.319e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

QD
type: SiteQuality
SIO_000300: 1.316e1

FS
type: SiteQuality
SIO_000300: 1.4138e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 8080
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4305
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.202837254383646e-5
allele num: 45396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8091
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 583
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6383
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.83e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.003e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.346121e6

VQSLOD
type: SiteQuality
SIO_000300: 5.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.331e0

GenotypeQuality
all individuals: 375
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6383
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4305
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 583
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45396
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.235941169200346e-4
allele num: 8091
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.331e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

VQSLOD
type: SiteQuality
SIO_000300: 5.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

FS
type: SiteQuality
SIO_000300: 4.003e0

DP
type: SiteQuality
SIO_000300: 1.346121e6

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 12

African
type: Population
allele count: 7
allele frequency: 8.665511265164644e-4
allele num: 8078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.767330888525604e-4
allele num: 45266
num of homozygotes: 0

Latino
type: Population
allele count: 1015
allele frequency: 1.134585289514867e-1
allele num: 8946
num of homozygotes: 58

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4294
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.721170395869191e-3
allele num: 581
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.842e0

VQSLOD
type: SiteQuality
SIO_000300: 2.032e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.365423e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.832e-1

QD
type: SiteQuality
SIO_000300: 1.873e1

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8957
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.209847078582162e-5
allele num: 45252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4297
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8073
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6375
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.088e0

VQSLOD
type: SiteQuality
SIO_000300: -3.249e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQ
type: SiteQuality
SIO_000300: 5.903e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.18e0

DP
type: SiteQuality
SIO_000300: 1.342031e6

QD
type: SiteQuality
SIO_000300: 1.561e1

GenotypeQuality
all individuals: 11116
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8815
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8935
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44333
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 569
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6264
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.58e-1

DP
type: SiteQuality
SIO_000300: 1.299372e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.552e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

QD
type: SiteQuality
SIO_000300: 1.927e1

GenotypeQuality
all individuals: 1316
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4021
num of homozygotes: 0

East Asian
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Latino
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African
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Other
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European (Non-Finnish)
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allele num: 41723
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South Asian
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ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Other
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Latino
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European (Finnish)
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South Asian
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FS
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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African
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Latino
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East Asian
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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VQSLOD
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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variant carriers: 0

Latino
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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Other
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South Asian
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Other
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African
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East Asian
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Latino
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 36350
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African
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East Asian
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South Asian
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allele frequency: 1.000571755288737e-3
allele num: 6996
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European (Finnish)
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allele frequency: 0.0e0
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Other
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VQSLOD
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BaseQRankSum
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MQ
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QD
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InbreedingCoeff
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ClippingRankSum
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FS
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

South Asian
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African
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allele frequency: 1.452432824981845e-4
allele num: 6885
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East Asian
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Latino
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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QD
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FS
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 2.8328611898017e-4
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East Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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ClippingRankSum
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InbreedingCoeff
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MQ
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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QD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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African
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Other
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East Asian
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South Asian
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Latino
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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African
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MQ
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QD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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DP
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Latino
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Other
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East Asian
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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DP
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QD
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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South Asian
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East Asian
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African
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European (Finnish)
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Latino
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Other
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MQ
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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VQSLOD
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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Latino
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East Asian
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allele frequency: 1.482898828031571e-1
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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VQSLOD
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DP
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MQRankSum
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MQ
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QD
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GenotypeQuality
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Latino
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South Asian
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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ReadPosRankSum
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MQ
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QD
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VQSLOD
type: SiteQuality
SIO_000300: -1.523e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.13e-2

FS
type: SiteQuality
SIO_000300: 2.115e0

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e0

DP
type: SiteQuality
SIO_000300: 7.40534e5

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.712967986977754e-4
allele num: 3686
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3031
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5075
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.992e1

DP
type: SiteQuality
SIO_000300: 7.14034e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.33e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.604e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 2

South Asian
type: Population
allele count: 4
allele frequency: 1.066098081023454e-3
allele num: 3752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4387
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 331
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5002
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 25428
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3010
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East Asian
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allele frequency: 1.248266296809986e-2
allele num: 3605
num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.069e0

VQSLOD
type: SiteQuality
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MQ
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.02675e5

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 25077
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4937
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3001
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

East Asian
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allele count: 9
allele frequency: 2.527379949452401e-3
allele num: 3561
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3585
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4284
num of homozygotes: 0

MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.904e1

DP
type: SiteQuality
SIO_000300: 6.91467e5

VQSLOD
type: SiteQuality
SIO_000300: -5.054999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.17e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-1

FS
type: SiteQuality
SIO_000300: 8.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4099
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 2
allele frequency: 6.25e-3
allele num: 320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4824
num of homozygotes: 0

European (Non-Finnish)
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allele count: 29
allele frequency: 1.190720591254362e-3
allele num: 24355
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3326
num of homozygotes: 0

European (Finnish)
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allele count: 32
allele frequency: 1.075268817204301e-2
allele num: 2976
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.75479e5

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.004e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

FS
type: SiteQuality
SIO_000300: 5.629999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.119803897334487e-5
allele num: 24273
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4819
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3440
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4077
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3260
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2964
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.72748e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.045e1

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.73e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3833
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23251
num of homozygotes: 0

African
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allele count: 1
allele frequency: 2.12630236019562e-4
allele num: 4703
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2918
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2837
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.596e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.62e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

QD
type: SiteQuality
SIO_000300: 1.852e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 5.212e0

MQRankSum
type: SiteQuality
SIO_000300: -1.397e0

DP
type: SiteQuality
SIO_000300: 6.55226e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 46

European (Non-Finnish)
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allele count: 881
allele frequency: 3.816826964734425e-2
allele num: 23082
num of homozygotes: 17

African
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allele count: 798
allele frequency: 1.68e-1
allele num: 4750
num of homozygotes: 59

South Asian
type: Population
allele count: 45
allele frequency: 1.61696011498383e-2
allele num: 2783
num of homozygotes: 0

East Asian
type: Population
allele count: 70
allele frequency: 2.138057422113622e-2
allele num: 3274
num of homozygotes: 0

Latino
type: Population
allele count: 134
allele frequency: 3.517060367454068e-2
allele num: 3810
num of homozygotes: 1

Other
type: Population
allele count: 13
allele frequency: 4.391891891891892e-2
allele num: 296
num of homozygotes: 0

European (Finnish)
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allele count: 54
allele frequency: 1.853122855181881e-2
allele num: 2914
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.554e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.6972e5

VQSLOD
type: SiteQuality
SIO_000300: 1.042e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

QD
type: SiteQuality
SIO_000300: 1.891e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3239
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3793
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2911
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4625
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22939
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 7.410151908114116e-4
allele num: 2699
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 299
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.073e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

QD
type: SiteQuality
SIO_000300: 1.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22783
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3244
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 297
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 4609
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

QD
type: SiteQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 4592
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.384042086804034e-5
allele num: 22810
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

FS
type: SiteQuality
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QD
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MQRankSum
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.73e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.52e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 2904
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 2518
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European (Non-Finnish)
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allele count: 1
allele frequency: 4.404122258433894e-5
allele num: 22706
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 295
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African
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allele frequency: 0.0e0
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East Asian
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FS
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.83e-2

MQ
type: SiteQuality
SIO_000300: 5.678e1

DP
type: SiteQuality
SIO_000300: 6.56614e5

ClippingRankSum
type: SiteQuality
SIO_000300: -8.01e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.015e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
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num of homozygotes: 0

South Asian
type: Population
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Latino
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num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 3.444712366517396e-4
allele num: 2903
num of homozygotes: 0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 4.45275625612254e-5
allele num: 22458
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Other
type: Population
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allele frequency: 0.0e0
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Latino
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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East Asian
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allele frequency: 3.115264797507788e-4
allele num: 3210
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South Asian
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
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FS
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VQSLOD
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DP
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BaseQRankSum
type: SiteQuality
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MQ
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MQRankSum
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele frequency: 8.882572392965002e-5
allele num: 22516
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Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 297
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3226
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 1.423e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 6.62446e5

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.73e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

QD
type: SiteQuality
SIO_000300: 3.17e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22586
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2918
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2455
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3793
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 293
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3236
num of homozygotes: 0

VQSLOD
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DP
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SIO_000300: 6.62948e5

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.69e-2

MQ
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

QD
type: SiteQuality
SIO_000300: 3.062e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22594
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2442
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3814
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4592
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2925
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3251
num of homozygotes: 0

InbreedingCoeff
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MQ
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2947
num of homozygotes: 0

European (Non-Finnish)
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allele count: 10
allele frequency: 4.412478489167365e-4
allele num: 22663
num of homozygotes: 0

Latino
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allele frequency: 2.585315408479835e-4
allele num: 3868
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 3266
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2450
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 293
num of homozygotes: 0

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
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SIO_000300: 6.69356e5

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

MQ
type: SiteQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 4599
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 295
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22674
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3877
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 2431
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3246
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2954
num of homozygotes: 0

MQ
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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QD
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.739e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.107e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22700
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 4584
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3891
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2950
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 299
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.512e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
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DP
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.62e-2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.39386616283668e-5
allele num: 22759
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 3256
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3913
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4601
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2957
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2450
num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.352e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.305e0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 1.307e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 1
allele frequency: 3.35795836131632e-4
allele num: 2978
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3313
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3944
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 4636
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2484
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22954
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 301
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.75e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 6.85437e5

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2985
num of homozygotes: 0

African
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allele count: 2
allele frequency: 4.289084280506112e-4
allele num: 4663
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3326
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3979
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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QD
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DP
type: SiteQuality
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.19775389551878e-5
allele num: 45501
num of homozygotes: 0

BaseQRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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FS
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DP
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 2.196595277320154e-5
allele num: 45525
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 554
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6521
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9253
num of homozygotes: 0

FS
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DP
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VQSLOD
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InbreedingCoeff
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9253
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
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allele frequency: 1.533036946190403e-4
allele num: 6523
num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.194426157559798e-5
allele num: 45570
num of homozygotes: 0

African
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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QD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 6.582700662658534e-5
allele num: 45574
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

QD
type: SiteQuality
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DP
type: SiteQuality
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FS
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 8273
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.080730573867935e-4
allele num: 9253
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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VQSLOD
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.192021043402017e-5
allele num: 45620
num of homozygotes: 0

East Asian
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African
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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QD
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ReadPosRankSum
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VQSLOD
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.54e-1

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 2.190196679661834e-5
allele num: 45658
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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FS
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MQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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DP
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele num: 6538
num of homozygotes: 0

African
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Other
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European (Non-Finnish)
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allele frequency: 1.533137675763283e-4
allele num: 45658
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 1.324503311258278e-3
allele num: 4530
num of homozygotes: 0

InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

Latino
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Other
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South Asian
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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DP
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele frequency: 0.0e0
allele num: 6551
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South Asian
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allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 559
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European (Non-Finnish)
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allele count: 2
allele frequency: 4.367670502937258e-5
allele num: 45791
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African
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allele frequency: 0.0e0
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Latino
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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DP
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MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
type: SiteQuality
SIO_000300: 2.835e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 575
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6591
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Latino
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allele count: 2
allele frequency: 2.154475923731552e-4
allele num: 9283
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African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

InbreedingCoeff
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FS
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.041773e6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 1.185817621249852e-4
allele num: 8433
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46662
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South Asian
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East Asian
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allele frequency: 0.0e0
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Other
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.04779e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 46693
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Other
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Latino
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allele frequency: 0.0e0
allele num: 9285
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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QD
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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FS
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MQRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
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South Asian
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European (Non-Finnish)
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allele frequency: 2.130469981677958e-5
allele num: 46938
num of homozygotes: 0

Latino
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African
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East Asian
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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DP
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VQSLOD
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BaseQRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele frequency: 2.419110976716057e-3
allele num: 6614
num of homozygotes: 0

Latino
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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South Asian
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FS
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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MQ
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele frequency: 8.500510030601836e-5
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East Asian
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Other
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African
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VQSLOD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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FS
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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Latino
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East Asian
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African
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European (Non-Finnish)
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ClippingRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
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FS
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VQSLOD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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African
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VQSLOD
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MQ
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QD
type: SiteQuality
SIO_000300: 2.971e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.068436e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.43e-2

GenotypeQuality
all individuals: 32396
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2911
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1809
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47273
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.179801793298726e-4
allele num: 8476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7829
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 603
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.643e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

DP
type: SiteQuality
SIO_000300: 3.069782e6

QD
type: SiteQuality
SIO_000300: 1.059e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.304e-1

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2716
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8439
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.212654815064453e-5
allele num: 47476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8493
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.42e-1

DP
type: SiteQuality
SIO_000300: 3.082085e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.57e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e0

FS
type: SiteQuality
SIO_000300: 2.677e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

MQ
type: SiteQuality
SIO_000300: 6.055e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.07e-1

QD
type: SiteQuality
SIO_000300: 2.174e1

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2469
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8497
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.631321370309951e-3
allele num: 613
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8831
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9310
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.090742e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.52e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.989e-1

FS
type: SiteQuality
SIO_000300: 2.627e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

QD
type: SiteQuality
SIO_000300: 1.518e1

GenotypeQuality
all individuals: 11747
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32396
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47866
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.056546102903719e-4
allele num: 9815
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.379e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.577e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.43e-1

DP
type: SiteQuality
SIO_000300: 3.115513e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.19e-1

GenotypeQuality
all individuals: 32397
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2469
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11758
bin: 6.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 1.525630593978845e-3
allele num: 9832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.044604617152408e-4
allele num: 47865
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175226231049477e-4
allele num: 8509
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.194888178913738e-3
allele num: 626
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.01659125188537e-4
allele num: 6630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.077e-1

FS
type: SiteQuality
SIO_000300: 5.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.49e-1

QD
type: SiteQuality
SIO_000300: 1.988e1

DP
type: SiteQuality
SIO_000300: 3.116924e6

VQSLOD
type: SiteQuality
SIO_000300: 4.466e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 32391
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 11774
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2923
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.016570092507878e-4
allele num: 9837
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47871
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508295625942685e-4
allele num: 6630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.45e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 6.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 1.896e0

MQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

QD
type: SiteQuality
SIO_000300: 1.822e1

DP
type: SiteQuality
SIO_000300: 3.115562e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.716e-1

GenotypeQuality
all individuals: 2467
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11804
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4266
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.014816318246397e-4
allele num: 9854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47877
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.298e0

FS
type: SiteQuality
SIO_000300: 2.612e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.76e0

VQSLOD
type: SiteQuality
SIO_000300: -1.088e0

MQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

DP
type: SiteQuality
SIO_000300: 3.115686e6

GenotypeQuality
all individuals: 493
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2922
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9859
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.880013368983957e-4
allele num: 47872
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072731173567904e-4
allele num: 9322
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 4.8e-3
allele num: 625
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.11639e6

QD
type: SiteQuality
SIO_000300: 2.251e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.938e0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.054e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.891e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.268675428881877e-5
allele num: 47857
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.11215e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.759e0

MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQ
type: SiteQuality
SIO_000300: 5.946e1

FS
type: SiteQuality
SIO_000300: 5.526e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.159e-1

QD
type: SiteQuality
SIO_000300: 2.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 714
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2717
bin: 8.25e1
variant carriers: 4

Latino
type: Population
allele count: 70
allele frequency: 7.50992382791546e-3
allele num: 9321
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

African
type: Population
allele count: 77
allele frequency: 9.049241979080974e-3
allele num: 8509
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 9.584664536741214e-3
allele num: 626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 622
allele frequency: 1.299977010052877e-2
allele num: 47847
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.324503311258278e-3
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 8.171603677221655e-4
allele num: 9790
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

QD
type: SiteQuality
SIO_000300: 1.836e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.622e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.617e-1

FS
type: SiteQuality
SIO_000300: 5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.014e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 3.154033e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

GenotypeQuality
all individuals: 230
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32179
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 2940
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 1.05795227459739e-3
allele num: 8507
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.035003017501509e-4
allele num: 6628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9725
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.045259747047141e-4
allele num: 47835
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.207505518763797e-4
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.77e0

QD
type: SiteQuality
SIO_000300: 1.693e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

DP
type: SiteQuality
SIO_000300: 3.074333e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.212e-1

FS
type: SiteQuality
SIO_000300: 1.172e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.58e-1

GenotypeQuality
all individuals: 2495
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10577
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32171
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47821
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508750754375377e-4
allele num: 6628
num of homozygotes: 0