X-66766356-TGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766356
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766317
    reference: chr 0
allele count: 31
allele frequency: 4.438717067583047e-3
allele num: 6984
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11864
  bin: 2.5e0
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 7.5e0
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13837
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 9.75e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 1.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 1.036269430051814e-2
  allele num: 193
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 8
  allele frequency: 1.850994909763998e-3
  allele num: 4322
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 123
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 88
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: TGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

X-66766359-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766359
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766359
    reference: chr 0
allele count: 29
allele frequency: 1.029098651525905e-2
allele num: 2818
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1371C>A
  hgvsp: ENST00000374690.3:c.1371C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1371C>A
  hgvsp: ENST00000514029.1:c.1371C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1371C>A
  hgvsp: ENST00000504326.1:c.1371C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1371C>A
  hgvsp: ENST00000396044.3:c.1371C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1698C>A
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5995
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 1
hgvs: p.Gly457Gly
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

X-66766360-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766360
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766360
    reference: chr 0
allele count: 15
allele frequency: 9.392611145898559e-3
allele num: 1597
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1372G>C
  hgvsp: ENSP00000379359.3:p.Gly458Arg
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1372G>C
  hgvsp: ENSP00000421155.1:p.Gly458Arg
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1372G>C
  hgvsp: ENSP00000425199.1:p.Gly458Arg
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1699G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1372G>C
  hgvsp: ENSP00000363822.3:p.Gly458Arg
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 84
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly458Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

X-66766362-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766362
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766362
    reference: chr 0
allele count: 22
allele frequency: 7.103648692282854e-3
allele num: 3097
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1374C>T
  hgvsp: ENST00000374690.3:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1374C>T
  hgvsp: ENST00000504326.1:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1374C>T
  hgvsp: ENST00000396044.3:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1374C>T
  hgvsp: ENST00000514029.1:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1701C>T
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6615
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly458Gly
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

X-66766365-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766365
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766365
    reference: chr 0
allele count: 21
allele frequency: 9.320905459387484e-3
allele num: 2253
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1377C>T
  hgvsp: ENST00000504326.1:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1377C>T
  hgvsp: ENST00000396044.3:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1704C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1377C>T
  hgvsp: ENST00000374690.3:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1377C>T
  hgvsp: ENST00000514029.1:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
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genotype depth: GenotypeDepth
  all individuals: 234
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 585
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4399
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genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 23
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genotype quality: GenotypeQuality
  all individuals: 558
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genotype quality: GenotypeQuality
  all individuals: 5285
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genotype quality: GenotypeQuality
  all individuals: 90
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 75
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 66
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genotype quality: GenotypeQuality
  all individuals: 71
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly459Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

X-66766371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766371
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766371
    reference: chr 0
allele count: 20
allele frequency: 3.731343283582089e-2
allele num: 536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1383C>T
  hgvsp: ENST00000504326.1:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1710C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1383C>T
  hgvsp: ENST00000396044.3:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1383C>T
  hgvsp: ENST00000374690.3:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1383C>T
  hgvsp: ENST00000514029.1:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 1
hgvs: p.Gly461Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

X-66766374-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766374
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766374
    reference: chr 0
allele count: 1
allele frequency: 9.708737864077669e-4
allele num: 1030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1386C>T
  hgvsp: ENST00000504326.1:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1386C>T
  hgvsp: ENST00000396044.3:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1386C>T
  hgvsp: ENST00000514029.1:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1386C>T
  hgvsp: ENST00000374690.3:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1713C>T
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly462Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ

X-66766386-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766386
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766386
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 4701
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1398C>T
  hgvsp: ENST00000396044.3:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1398C>T
  hgvsp: ENST00000374690.3:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1398C>T
  hgvsp: ENST00000514029.1:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1725C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1398C>T
  hgvsp: ENST00000504326.1:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly466Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

X-66766389-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766389
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766389
    reference: chr 0
allele count: 1
allele frequency: 1.960399921584003e-4
allele num: 5101
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1728C>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1401C>A
  hgvsp: ENST00000504326.1:c.1401C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1401C>A
  hgvsp: ENST00000514029.1:c.1401C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1401C>A
  hgvsp: ENST00000396044.3:c.1401C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1401C>A
  hgvsp: ENST00000374690.3:c.1401C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18968
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20412
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly467Gly
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

X-66766406-G-GCGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766406
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766409
    reference: chr 0
allele count: 5
allele frequency: 6.969612489545581e-4
allele num: 7174
alternate allele: GCGA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1419_1421dupCGA
  hgvsp: ENSP00000425199.1:p.Gly473_Glu474insAsp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1419_1421dupCGA
  hgvsp: ENSP00000421155.1:p.Gly473_Glu474insAsp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1419_1421dupCGA
  hgvsp: ENSP00000363822.3:p.Gly473_Glu474insAsp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1419_1421dupCGA
  hgvsp: ENSP00000379359.3:p.Gly473_Glu474insAsp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1746_1748dupCGA
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32228
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30352
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2226
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly473_Glu474insAsp
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

X-66766412-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766412
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766412
    reference: chr 0
allele count: 45
allele frequency: 5.462490895848507e-3
allele num: 8238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1424C>T
  hgvsp: ENSP00000421155.1:p.Ala475Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1424C>T
  hgvsp: ENSP00000425199.1:p.Ala475Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1751C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1424C>T
  hgvsp: ENSP00000363822.3:p.Ala475Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1424C>T
  hgvsp: ENSP00000379359.3:p.Ala475Val
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 32956
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11491
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2599
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 9.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 31853
  bin: 7.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 1.25e1
  variant carriers: 12
hgvs: p.Ala475Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

X-66766421-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766421
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766421
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 10479
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1433T>C
  hgvsp: ENSP00000421155.1:p.Val478Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1760T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1433T>C
  hgvsp: ENSP00000425199.1:p.Val478Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1433T>C
  hgvsp: ENSP00000363822.3:p.Val478Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1433T>C
  hgvsp: ENSP00000379359.3:p.Val478Ala
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30902
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16370
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29474
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14042
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val478Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP

X-66766431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766431
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766431
    reference: chr 0
allele count: 1
allele frequency: 7.779679477205539e-5
allele num: 12854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1443C>T
  hgvsp: ENST00000396044.3:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1443C>T
  hgvsp: ENST00000374690.3:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1443C>T
  hgvsp: ENST00000514029.1:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1770C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1443C>T
  hgvsp: ENST00000504326.1:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21030
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 78
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25432
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18822
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr481Tyr
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-66766432-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766432
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766432
    reference: chr 0
allele count: 1
allele frequency: 7.411799584939223e-5
allele num: 13492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1771G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1444G>C
  hgvsp: ENSP00000363822.3:p.Gly482Arg
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1444G>C
  hgvsp: ENSP00000421155.1:p.Gly482Arg
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1444G>C
  hgvsp: ENSP00000379359.3:p.Gly482Arg
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1444G>C
  hgvsp: ENSP00000425199.1:p.Gly482Arg
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25821
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24991
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly482Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

X-66766437-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766437
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766437
    reference: chr 0
allele count: 414
allele frequency: 2.830188679245283e-2
allele num: 14628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1449C>A
  hgvsp: ENSP00000379359.3:p.Tyr483Ter
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1449C>A
  hgvsp: ENSP00000421155.1:p.Tyr483Ter
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1449C>A
  hgvsp: ENSP00000363822.3:p.Tyr483Ter
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1776C>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1449C>A
  hgvsp: ENSP00000425199.1:p.Tyr483Ter
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 2.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24371
  bin: 7.5e0
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 22240
  bin: 2.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 1.25e1
  variant carriers: 111
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 3.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
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  variant carriers: 30
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 311
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  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 20767
  bin: 2.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 319
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 1.25e1
  variant carriers: 16
hgvs: p.Tyr483Ter
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

X-66766460-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766460
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766460
    reference: chr 0
allele count: 1
allele frequency: 3.967781613300004e-5
allele num: 25203
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1472C>T
  hgvsp: ENSP00000421155.1:p.Ala491Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1799C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1472C>T
  hgvsp: ENSP00000379359.3:p.Ala491Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1472C>T
  hgvsp: ENSP00000363822.3:p.Ala491Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1472C>T
  hgvsp: ENSP00000425199.1:p.Ala491Val
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25142
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7143
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14647
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala491Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

X-66766463-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766463
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766463
    reference: chr 0
allele count: 1
allele frequency: 3.601137959595232e-5
allele num: 27769
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1475G>A
  hgvsp: ENSP00000363822.3:p.Gly492Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1475G>A
  hgvsp: ENSP00000425199.1:p.Gly492Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1475G>A
  hgvsp: ENSP00000379359.3:p.Gly492Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1475G>A
  hgvsp: ENSP00000421155.1:p.Gly492Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1802G>A
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
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genotype depth: GenotypeDepth
  all individuals: 12
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genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7898
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 754
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly492Asp
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

X-66766467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766467
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766467
    reference: chr 0
allele count: 4
allele frequency: 1.339719328800616e-4
allele num: 29857
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1479G>A
  hgvsp: ENST00000504326.1:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1479G>A
  hgvsp: ENST00000374690.3:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1806G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1479G>A
  hgvsp: ENST00000514029.1:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1479G>A
  hgvsp: ENST00000396044.3:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29164
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12733
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12313
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 116
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genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln493Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

X-66766472-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766472
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766472
    reference: chr 0
allele count: 5
allele frequency: 1.552361141295911e-4
allele num: 32209
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1484G>A
  hgvsp: ENSP00000425199.1:p.Ser495Asn
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1484G>A
  hgvsp: ENSP00000379359.3:p.Ser495Asn
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1484G>A
  hgvsp: ENSP00000363822.3:p.Ser495Asn
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1811G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1484G>A
  hgvsp: ENSP00000421155.1:p.Ser495Asn
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11090
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1372
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 10751
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser495Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

X-66766475-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766475
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766475
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 34070
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1487A>G
  hgvsp: ENSP00000421155.1:p.Asp496Gly
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1487A>G
  hgvsp: ENSP00000379359.3:p.Asp496Gly
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1814A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1487A>G
  hgvsp: ENSP00000425199.1:p.Asp496Gly
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1487A>G
  hgvsp: ENSP00000363822.3:p.Asp496Gly
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29883
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9958
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 11266
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9608
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28548
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp496Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD

X-66766501-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766501
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766501
    reference: chr 0
allele count: 6
allele frequency: 1.264062697509797e-4
allele num: 47466
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1513C>A
  hgvsp: ENSP00000425199.1:p.Pro505Thr
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1513C>A
  hgvsp: ENSP00000363822.3:p.Pro505Thr
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1840C>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1513C>A
  hgvsp: ENSP00000421155.1:p.Pro505Thr
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1513C>A
  hgvsp: ENSP00000379359.3:p.Pro505Thr
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17277
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4598
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27125
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1820
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genotype quality: GenotypeQuality
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 3.25e1
  variant carriers: 2
hgvs: p.Pro505Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

X-66766506-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766506
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766506
    reference: chr 0
allele count: 2
allele frequency: 4.04498017959712e-5
allele num: 49444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1518C>G
  hgvsp: ENST00000396044.3:c.1518C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1518C>G
  hgvsp: ENST00000514029.1:c.1518C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1845C>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1518C>G
  hgvsp: ENST00000504326.1:c.1518C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1518C>G
  hgvsp: ENST00000374690.3:c.1518C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3858
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26793
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
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genotype quality: GenotypeQuality
  all individuals: 862
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
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genotype quality: GenotypeQuality
  all individuals: 3916
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly506Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

X-66766507-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766507
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766507
    reference: chr 0
allele count: 3
allele frequency: 5.989338976621613e-5
allele num: 50089
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1519G>A
  hgvsp: ENSP00000379359.3:p.Gly507Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1519G>A
  hgvsp: ENSP00000425199.1:p.Gly507Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1846G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1519G>A
  hgvsp: ENSP00000421155.1:p.Gly507Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1519G>A
  hgvsp: ENSP00000363822.3:p.Gly507Ser
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18275
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1890
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26086
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 490
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly507Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

X-66766508-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766508
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766508
    reference: chr 0
allele count: 1
allele frequency: 1.985111662531018e-5
allele num: 50375
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1847G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1520G>A
  hgvsp: ENSP00000425199.1:p.Gly507Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1520G>A
  hgvsp: ENSP00000379359.3:p.Gly507Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1520G>A
  hgvsp: ENSP00000421155.1:p.Gly507Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1520G>A
  hgvsp: ENSP00000363822.3:p.Gly507Asp
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3723
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18648
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1522
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly507Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

X-66766523-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766523
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766523
    reference: chr 0
allele count: 1
allele frequency: 1.789196829543218e-5
allele num: 55891
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1862T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1535T>C
  hgvsp: ENSP00000425199.1:p.Val512Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1535T>C
  hgvsp: ENSP00000379359.3:p.Val512Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1535T>C
  hgvsp: ENSP00000421155.1:p.Val512Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1535T>C
  hgvsp: ENSP00000363822.3:p.Val512Ala
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2552
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22735
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24416
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val512Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

X-66766524-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766524
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766524
    reference: chr 0
allele count: 49
allele frequency: 8.719016352604138e-4
allele num: 56199
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1536G>A
  hgvsp: ENST00000514029.1:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1536G>A
  hgvsp: ENST00000396044.3:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1536G>A
  hgvsp: ENST00000504326.1:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1536G>A
  hgvsp: ENST00000374690.3:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1863G>A
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21529
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24062
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24378
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23073
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 9.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val512Val
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff

X-66766528-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766528
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766528
    reference: chr 0
allele count: 1
allele frequency: 1.735960420102422e-5
allele num: 57605
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1867T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1540T>C
  hgvsp: ENSP00000425199.1:p.Tyr514His
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1540T>C
  hgvsp: ENSP00000421155.1:p.Tyr514His
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1540T>C
  hgvsp: ENSP00000363822.3:p.Tyr514His
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1540T>C
  hgvsp: ENSP00000379359.3:p.Tyr514His
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22004
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24096
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23841
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr514His
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

X-66766529-ATCCCAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766529
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766523
    reference: chr 0
allele count: 1
allele frequency: 1.726877115424466e-5
allele num: 57908
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1547_1552delGTCCCA
  hgvsp: ENSP00000363822.3:p.Ser516_Pro517del
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1547_1552delGTCCCA
  hgvsp: ENSP00000379359.3:p.Ser516_Pro517del
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1874_1879delGTCCCA
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1547_1552delGTCCCA
  hgvsp: ENSP00000425199.1:p.Ser516_Pro517del
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1547_1552delGTCCCA
  hgvsp: ENSP00000421155.1:p.Ser516_Pro517del
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5172
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24100
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24012
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser516_Pro517del
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: ATCCCAG
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

X-66766530-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766530
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766530
    reference: chr 0
allele count: 6
allele frequency: 1.034964552464078e-4
allele num: 57973
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1869T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1542T>C
  hgvsp: ENST00000514029.1:c.1542T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1542T>C
  hgvsp: ENST00000374690.3:c.1542T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1542T>C
  hgvsp: ENST00000504326.1:c.1542T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1542T>C
  hgvsp: ENST00000396044.3:c.1542T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23181
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
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genotype depth: GenotypeDepth
  all individuals: 12
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23787
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 305
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genotype quality: GenotypeQuality
  all individuals: 23655
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genotype quality: GenotypeQuality
  all individuals: 979
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genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Tyr514Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

X-66766575-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766575
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766575
    reference: chr 0
allele count: 1
allele frequency: 1.674312694638851e-5
allele num: 59726
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1587T>C
  hgvsp: ENST00000396044.3:c.1587T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1914T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1587T>C
  hgvsp: ENST00000374690.3:c.1587T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1587T>C
  hgvsp: ENST00000514029.1:c.1587T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1587T>C
  hgvsp: ENST00000504326.1:c.1587T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21049
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
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genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp529Asp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

X-66766576-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766576
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766576
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 59502
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1915A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1588A>G
  hgvsp: ENSP00000379359.3:p.Ser530Gly
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1588A>G
  hgvsp: ENSP00000425199.1:p.Ser530Gly
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1588A>G
  hgvsp: ENSP00000421155.1:p.Ser530Gly
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1588A>G
  hgvsp: ENSP00000363822.3:p.Ser530Gly
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21581
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 476
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser530Gly
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

X-66766603-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766603
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766603
    reference: chr 0
allele count: 1
allele frequency: 1.942501942501943e-5
allele num: 51480
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1615C>A
  hgvsp: ENSP00000363822.3:p.Arg539Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1615C>A
  hgvsp: ENSP00000421155.1:p.Arg539Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1615C>A
  hgvsp: ENSP00000379359.3:p.Arg539Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1942C>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1615C>A
  hgvsp: ENSP00000425199.1:p.Arg539Ser
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12607
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15064
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6919
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg539Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

X-66766616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766616
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766616
    reference: chr 0
allele count: 30
allele frequency: 6.363617079948242e-4
allele num: 47143
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+12C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+12C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+12C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+12C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+12C>T
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 39
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 944
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 1.75e1
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genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 546
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genotype quality: GenotypeQuality
  all individuals: 28845
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 399
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1482
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 255
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

X-66766622-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066766622
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066766622
    reference: chr 0
allele count: 1
allele frequency: 2.269838387506809e-5
allele num: 44056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+18G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+18G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+18G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+18G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+18G>T
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13790
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 666
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1327
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

X-66788799-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788799
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788799
    reference: chr 0
allele count: 1
allele frequency: 1.150178852811612e-5
allele num: 86943
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22195G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22195G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.-46G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22195G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22195G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22195G>A
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

X-66788808-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788808
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788808
    reference: chr 0
allele count: 1
allele frequency: 1.149967225934061e-5
allele num: 86959
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22204T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22204T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22204T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.-37T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22204T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22204T>C
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 2871
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37778
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

X-66788809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788809
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788809
    reference: chr 0
allele count: 2
allele frequency: 2.299987350069575e-5
allele num: 86957
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22205G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22205G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22205G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22205G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.-36G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22205G>A
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3139
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2485
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2815
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genotype quality: GenotypeQuality
  all individuals: 11
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genotype quality: GenotypeQuality
  all individuals: 1434
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 66
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genotype quality: GenotypeQuality
  all individuals: 93
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

X-66788823-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788823
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788823
    reference: chr 0
allele count: 1
allele frequency: 1.149901108504669e-5
allele num: 86964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22219A>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22219A>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22219A>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.-22A>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22219A>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22219A>T
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 9188
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1834
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

X-66788824-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788824
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788824
    reference: chr 0
allele count: 1
allele frequency: 1.149914331382312e-5
allele num: 86963
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22220C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22220C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22220C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22220C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.-21C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22220C>T
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

X-66788833-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788833
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788833
    reference: chr 0
allele count: 3
allele frequency: 3.44934634886689e-5
allele num: 86973
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22229T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.-12T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22229T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22229T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22229T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22229T>C
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4471
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 77
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7495
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

X-66788841-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788841
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788841
    reference: chr 0
allele count: 1
allele frequency: 1.149821777624468e-5
allele num: 86970
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22237T>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22237T>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22237T>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22237T>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22237T>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.-4T>G
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4471
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1824
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genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7542
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3493
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37781
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP

X-66788845-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788845
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788845
    reference: chr 0
allele count: 1
allele frequency: 1.149848220034955e-5
allele num: 86968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22241A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.1A>G
  hgvsp: ENSP00000379358.2:p.Met1?
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22241A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22241A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22241A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22241A>G
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2485
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
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genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7545
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 32
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

X-66788850-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788850
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788850
    reference: chr 0
allele count: 1
allele frequency: 1.149954001839926e-5
allele num: 86960
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22246A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22246A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22246A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.6A>G
  hgvsp: ENSP00000379358.2:p.Ile2Met
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22246A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22246A>G
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9189
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 8.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37780
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile2Met
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

X-66788856-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788856
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788856
    reference: chr 0
allele count: 2
allele frequency: 2.299749327323322e-5
allele num: 86966
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.12G>C
  hgvsp: ENSP00000379358.2:p.Trp4Cys
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22252G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22252G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22252G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22252G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22252G>C
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37780
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7530
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Trp4Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

X-66788865-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788865
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788865
    reference: chr 0
allele count: 2
allele frequency: 2.299960900664689e-5
allele num: 86958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22261G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22261G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22261G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+1G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22261G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22261G>A
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 9189
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1199
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37779
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
hgvs: c.20+1G>A
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

X-66788871-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788871
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788871
    reference: chr 0
allele count: 1
allele frequency: 1.150139166839188e-5
allele num: 86946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22267G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+7G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22267G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22267G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22267G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22267G>T
  variant of: http://identifiers.org/hgnc/644
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 13
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genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 31
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
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genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 9
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genotype quality: GenotypeQuality
  all individuals: 163
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genotype quality: GenotypeQuality
  all individuals: 56
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
hgvs: c.20+7G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

X-66788880-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788880
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788880
    reference: chr 0
allele count: 6
allele frequency: 6.902025744556027e-5
allele num: 86931
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22276A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+16A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22276A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22276A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22276A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22276A>G
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3465
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

X-66788881-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788881
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788881
    reference: chr 0
allele count: 3
allele frequency: 3.45117167278291e-5
allele num: 86927
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+17T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22277T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22277T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22277T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22277T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22277T>C
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 9189
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 2697
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-66788883-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788883
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788883
    reference: chr 0
allele count: 1
allele frequency: 1.150456731322335e-5
allele num: 86922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22279G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22279G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22279G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+19G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22279G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22279G>A
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4471
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 236
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genotype depth: GenotypeDepth
  all individuals: 3233
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2695
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genotype quality: GenotypeQuality
  all individuals: 20
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genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS

X-66788889-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788889
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788889
    reference: chr 0
allele count: 2
allele frequency: 2.300701714022777e-5
allele num: 86930
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22285T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22285T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+25T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22285T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22285T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22285T>C
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9189
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5421
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 81
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  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

X-66788892-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788892
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788892
    reference: chr 0
allele count: 1
allele frequency: 1.150522912663806e-5
allele num: 86917
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22288G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22288G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+28G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22288G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22288G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22288G>T
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2441
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3397
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

X-66788903-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788903
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788903
    reference: chr 0
allele count: 1
allele frequency: 1.150840689123405e-5
allele num: 86893
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22299C>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+39C>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22299C>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22299C>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22299C>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22299C>G
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 360
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genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 335
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

X-66788908-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066788908
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066788908
    reference: chr 0
allele count: 34
allele frequency: 3.914164671210168e-4
allele num: 86864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1616+22304G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.20+44G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1616+22304G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1616+22304G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1616+22304G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1943+22304G>C
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2874
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genotype depth: GenotypeDepth
  all individuals: 3232
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2664
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5292
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2717
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genotype quality: GenotypeQuality
  all individuals: 39
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
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  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

X-66863047-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863047
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863047
    reference: chr 0
allele count: 17
allele frequency: 1.948826118855466e-4
allele num: 87232
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1617-51A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1617-51A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1617-51A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1617-51A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.21-51A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1944-51A>G
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 366
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
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genotype depth: GenotypeDepth
  all individuals: 1333
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 445
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
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  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-66863053-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863053
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863053
    reference: chr 0
allele count: 2
allele frequency: 2.29344647669285e-5
allele num: 87205
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1617-45G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1944-45G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.21-45G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1617-45G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1617-45G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1617-45G>A
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 619
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 654
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

X-66863061-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863061
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863061
    reference: chr 0
allele count: 1
allele frequency: 1.145554104520356e-5
allele num: 87294
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1617-37G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.21-37G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1617-37G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1617-37G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1617-37G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1944-37G>A
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41166
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

X-66863065-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863065
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863063
    reference: chr 0
allele count: 1
allele frequency: 1.145422890131036e-5
allele num: 87304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1944-32_1944-31delAT
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1617-32_1617-31delAT
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1617-32_1617-31delAT
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1617-32_1617-31delAT
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1617-32_1617-31delAT
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.21-32_21-31delAT
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4672
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: CAT
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

X-66863079-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863079
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863079
    reference: chr 0
allele count: 2
allele frequency: 2.288958066288226e-5
allele num: 87376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1617-19G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1617-19G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1944-19G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1617-19G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1617-19G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.21-19G>A
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4673
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42953
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

X-66863079-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863079
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863079
    reference: chr 0
allele count: 9
allele frequency: 1.030031129829702e-4
allele num: 87376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1617-19G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.21-19G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1944-19G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1617-19G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1617-19G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1617-19G>T
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26311
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 42953
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS

X-66863093-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863093
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863093
    reference: chr 0
allele count: 1
allele frequency: 1.143549807311857e-5
allele num: 87447
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.21-5T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1617-5T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1617-5T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1617-5T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1617-5T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1944-5T>C
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4666
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6202
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1617-5T>C
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

X-66863104-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863104
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863104
    reference: chr 0
allele count: 1
allele frequency: 1.143209904770615e-5
allele num: 87473
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.27G>T
  hgvsp: ENSP00000379358.2:p.Glu9Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1623G>T
  hgvsp: ENSP00000425199.1:p.Glu541Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1950G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1623G>T
  hgvsp: ENSP00000363822.3:p.Glu541Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1623G>T
  hgvsp: ENSP00000379359.3:p.Glu541Asp
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1623G>T
  hgvsp: ENSP00000421155.1:p.Glu541Asp
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4666
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu541Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

X-66863105-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863105
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863105
    reference: chr 0
allele count: 1
allele frequency: 1.143196835631159e-5
allele num: 87474
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1624A>G
  hgvsp: ENSP00000425199.1:p.Thr542Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1624A>G
  hgvsp: ENSP00000421155.1:p.Thr542Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1951A>G
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.28A>G
  hgvsp: ENSP00000379358.2:p.Thr10Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1624A>G
  hgvsp: ENSP00000379359.3:p.Thr542Ala
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1624A>G
  hgvsp: ENSP00000363822.3:p.Thr542Ala
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr542Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

X-66863125-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863125
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863125
    reference: chr 0
allele count: 15
allele frequency: 1.715363943049917e-4
allele num: 87445
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1644G>T
  hgvsp: ENSP00000363822.3:p.Leu548Phe
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1644G>T
  hgvsp: ENSP00000425199.1:p.Leu548Phe
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.48G>T
  hgvsp: ENSP00000379358.2:p.Leu16Phe
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1644G>T
  hgvsp: ENSP00000379359.3:p.Leu548Phe
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1971G>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1644G>T
  hgvsp: ENSP00000421155.1:p.Leu548Phe
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8137
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu548Phe
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

X-66863132-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863132
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863132
    reference: chr 0
allele count: 2
allele frequency: 2.287910679967054e-5
allele num: 87416
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1651G>C
  hgvsp: ENSP00000363822.3:p.Asp551His
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.55G>C
  hgvsp: ENSP00000379358.2:p.Asp19His
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1651G>C
  hgvsp: ENSP00000425199.1:p.Asp551His
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1651G>C
  hgvsp: ENSP00000421155.1:p.Asp551His
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1978G>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1651G>C
  hgvsp: ENSP00000379359.3:p.Asp551His
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4658
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp551His
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP

X-66863137-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863137
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863137
    reference: chr 0
allele count: 7
allele frequency: 8.009978144202492e-5
allele num: 87391
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.1983T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1656T>C
  hgvsp: ENST00000514029.1:c.1656T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.60T>C
  hgvsp: ENST00000396043.2:c.60T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1656T>C
  hgvsp: ENST00000396044.3:c.1656T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1656T>C
  hgvsp: ENST00000374690.3:c.1656T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1656T>C
  hgvsp: ENST00000504326.1:c.1656T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4659
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr552Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

X-66863155-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863155
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863155
    reference: chr 0
allele count: 1
allele frequency: 1.148369315571888e-5
allele num: 87080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1674G>A
  hgvsp: ENST00000504326.1:c.1674G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2001G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1674G>A
  hgvsp: ENST00000514029.1:c.1674G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1674G>A
  hgvsp: ENST00000374690.3:c.1674G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1674G>A
  hgvsp: ENST00000396044.3:c.1674G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.78G>A
  hgvsp: ENST00000396043.2:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6097
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys558Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

X-66863156-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863156
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863156
    reference: chr 0
allele count: 15
allele frequency: 1.722435293847461e-4
allele num: 87086
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1675A>T
  hgvsp: ENSP00000363822.3:p.Thr559Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1675A>T
  hgvsp: ENSP00000421155.1:p.Thr559Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1675A>T
  hgvsp: ENSP00000425199.1:p.Thr559Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2002A>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1675A>T
  hgvsp: ENSP00000379359.3:p.Thr559Ser
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.79A>T
  hgvsp: ENSP00000379358.2:p.Thr27Ser
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17403
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr559Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

X-66863197-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863197
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863197
    reference: chr 0
allele count: 1
allele frequency: 1.208400802378133e-5
allele num: 82754
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2043T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1716T>C
  hgvsp: ENST00000504326.1:c.1716T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1716T>C
  hgvsp: ENST00000396044.3:c.1716T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1716T>C
  hgvsp: ENST00000514029.1:c.1716T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.120T>C
  hgvsp: ENST00000396043.2:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1716T>C
  hgvsp: ENST00000374690.3:c.1716T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7126
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
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genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22693
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4627
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr572Tyr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

X-66863202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863202
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863202
    reference: chr 0
allele count: 2
allele frequency: 2.44268842287822e-5
allele num: 81877
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.125C>T
  hgvsp: ENSP00000379358.2:p.Ala42Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1721C>T
  hgvsp: ENSP00000425199.1:p.Ala574Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2048C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1721C>T
  hgvsp: ENSP00000379359.3:p.Ala574Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1721C>T
  hgvsp: ENSP00000363822.3:p.Ala574Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1721C>T
  hgvsp: ENSP00000421155.1:p.Ala574Val
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21928
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genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4776
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34294
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genotype quality: GenotypeQuality
  all individuals: 1246
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala574Val
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

X-66863204-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863204
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863204
    reference: chr 0
allele count: 10
allele frequency: 1.227174553308463e-4
allele num: 81488
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1723C>G
  hgvsp: ENSP00000425199.1:p.Leu575Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.127C>G
  hgvsp: ENSP00000379358.2:p.Leu43Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1723C>G
  hgvsp: ENSP00000363822.3:p.Leu575Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1723C>G
  hgvsp: ENSP00000379359.3:p.Leu575Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1723C>G
  hgvsp: ENSP00000421155.1:p.Leu575Val
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2050C>G
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13098
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 668
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 338
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu575Val
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

X-66863212-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863212
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863212
    reference: chr 0
allele count: 1
allele frequency: 1.256502399919584e-5
allele num: 79586
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1731T>C
  hgvsp: ENST00000374690.3:c.1731T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1731T>C
  hgvsp: ENST00000396044.3:c.1731T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1731T>C
  hgvsp: ENST00000504326.1:c.1731T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2058T>C
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1731T>C
  hgvsp: ENST00000514029.1:c.1731T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.135T>C
  hgvsp: ENST00000396043.2:c.135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12261
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30870
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Cys577Cys
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

X-66863218-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863218
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863218
    reference: chr 0
allele count: 6
allele frequency: 7.708020195012911e-5
allele num: 77841
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1737C>T
  hgvsp: ENST00000396044.3:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2064C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1737C>T
  hgvsp: ENST00000514029.1:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.141C>T
  hgvsp: ENST00000396043.2:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1737C>T
  hgvsp: ENST00000504326.1:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1737C>T
  hgvsp: ENST00000374690.3:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6357
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14640
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser579Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

X-66863224-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863224
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863224
    reference: chr 0
allele count: 96
allele frequency: 1.256544502617801e-3
allele num: 76400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2070G>A
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1743G>A
  hgvsp: ENST00000374690.3:c.1743G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1743G>A
  hgvsp: ENST00000514029.1:c.1743G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1743G>A
  hgvsp: ENST00000396044.3:c.1743G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.147G>A
  hgvsp: ENST00000396043.2:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1743G>A
  hgvsp: ENST00000504326.1:c.1743G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17685
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8821
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6085
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9508
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9549
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26851
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16526
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3800
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys581Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

X-66863227-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24066863227
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24066863227
    reference: chr 0
allele count: 7
allele frequency: 9.281850005303914e-5
allele num: 75416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169083
  ensembl transcript: ENST00000513847
  gene symbol: AR
  hgvsc: ENST00000513847.1:n.2073C>T
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379358
  ensembl transcript: ENST00000396043
  gene symbol: AR
  hgvsc: ENST00000396043.2:c.150C>T
  hgvsp: ENST00000396043.2:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000421155
  ensembl transcript: ENST00000504326
  gene symbol: AR
  hgvsc: ENST00000504326.1:c.1746C>T
  hgvsp: ENST00000504326.1:c.1746C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000425199
  ensembl transcript: ENST00000514029
  gene symbol: AR
  hgvsc: ENST00000514029.1:c.1746C>T
  hgvsp: ENST00000514029.1:c.1746C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000363822
  ensembl transcript: ENST00000374690
  gene symbol: AR
  hgvsc: ENST00000374690.3:c.1746C>T
  hgvsp: ENST00000374690.3:c.1746C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169083
  ensembl protein: ENSP00000379359
  ensembl transcript: ENST00000396044
  gene symbol: AR
  hgvsc: ENST00000396044.3:c.1746C>T
  hgvsp: ENST00000396044.3:c.1746C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/644
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5951
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val582Val
num of homozygotes: 0
reference allele: C

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 9.776536312849162e-3
allele num: 2148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

DP
type: SiteQuality
SIO_000300: 2.41261e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.909e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

FS
type: SiteQuality
SIO_000300: 2.681e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.37e-1

MQ
type: SiteQuality
SIO_000300: 5.587e1

QD
type: SiteQuality
SIO_000300: 4.39e0

GenotypeQuality
all individuals: 166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 51
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 658
bin: 6.25e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.351351351351351e-2
allele num: 74
num of homozygotes: 0

South Asian
type: Population
allele count: 22
allele frequency: 1.245753114382786e-2
allele num: 1766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.702702702702703e-2
allele num: 37
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 5.813953488372093e-3
allele num: 860
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.182e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 5.94e0

VQSLOD
type: SiteQuality
SIO_000300: -1.438e0

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.17e-2

MQ
type: SiteQuality
SIO_000300: 5.859e1

DP
type: SiteQuality
SIO_000300: 1.92161e5

GenotypeQuality
all individuals: 14
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 144
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 95
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 11
allele frequency: 1.112234580384226e-2
allele num: 989
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.127659574468085e-2
allele num: 47
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.085192697768763e-3
allele num: 493
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 3.211e1

MQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

DP
type: SiteQuality
SIO_000300: 1.769e5

BaseQRankSum
type: SiteQuality
SIO_000300: -5.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.673e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.64e-1

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 8.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.75e1
variant carriers: 10

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.408450704225352e-2
allele num: 71
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 7.216494845360825e-3
allele num: 970
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 7.257646448937273e-3
allele num: 1929
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.65e-2

MQ
type: SiteQuality
SIO_000300: 5.537e1

FS
type: SiteQuality
SIO_000300: 1.172e0

VQSLOD
type: SiteQuality
SIO_000300: -1.18e-1

DP
type: SiteQuality
SIO_000300: 1.95682e5

QD
type: SiteQuality
SIO_000300: 2.686e1

GenotypeQuality
all individuals: 399
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 200
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 626
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 7.320644216691069e-3
allele num: 1366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 5.357142857142857e-2
allele num: 56
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.103448275862069e-2
allele num: 725
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

FS
type: SiteQuality
SIO_000300: 2.653e0

DP
type: SiteQuality
SIO_000300: 1.84449e5

VQSLOD
type: SiteQuality
SIO_000300: -9.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.613e1

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 49
bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5
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South Asian
type: Population
allele count: 7
allele frequency: 2.034883720930233e-2
allele num: 344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 8.888888888888889e-2
allele num: 135
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.25e-1
allele num: 8
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

VQSLOD
type: SiteQuality
SIO_000300: -8.945e-1

DP
type: SiteQuality
SIO_000300: 1.52291e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.31e-1

MQ
type: SiteQuality
SIO_000300: 5.559e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

QD
type: SiteQuality
SIO_000300: 1.819e1

MQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

FS
type: SiteQuality
SIO_000300: 1.0003e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.08e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.497005988023952e-3
allele num: 668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.53e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.53e-1

QD
type: SiteQuality
SIO_000300: 3.035e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.53e-1

DP
type: SiteQuality
SIO_000300: 1.47393e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.229e1

GenotypeQuality
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 161
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.939999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 5.364e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.659e1

DP
type: SiteQuality
SIO_000300: 1.58796e5

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.369426751592356e-4
allele num: 1570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3065
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.637e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 2.309e1

DP
type: SiteQuality
SIO_000300: 1.65392e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.408e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.05e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.429e0

GenotypeQuality
all individuals: 1191
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6993
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 365
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 157
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 5.321979776476849e-4
allele num: 3758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.399832003359933e-4
allele num: 2381
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.700680272108843e-3
allele num: 588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 75
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 113
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.065e0

QD
type: SiteQuality
SIO_000300: 1.664e1

VQSLOD
type: SiteQuality
SIO_000300: -9.913999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.969999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.38364e5

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 5

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 6.196213425129088e-3
allele num: 2905
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 223
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 167
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.145475372279496e-3
allele num: 873
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.219512195121951e-2
allele num: 82
num of homozygotes: 0

South Asian
type: Population
allele count: 25
allele frequency: 6.435006435006435e-3
allele num: 3885
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 103
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.115e0

DP
type: SiteQuality
SIO_000300: 2.88663e5

VQSLOD
type: SiteQuality
SIO_000300: -4.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.35e-2

QD
type: SiteQuality
SIO_000300: 1.438e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3676
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4051
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1239
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4271
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.678e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.21e-2

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.521e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.50765e5

GenotypeQuality
all individuals: 297
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4300
bin: 6.25e1
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GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 117
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 505
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 293
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4591
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.888574126534466e-4
allele num: 5295
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1489
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 4.1114e5

QD
type: SiteQuality
SIO_000300: 1.778e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.21e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-2

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
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GenotypeQuality
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GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 315
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variant carriers: 0

GenotypeQuality
all individuals: 19851
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5667
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1617
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.798561151079137e-3
allele num: 556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 291
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 117
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.953e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

QD
type: SiteQuality
SIO_000300: 6.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.66e-1

DP
type: SiteQuality
SIO_000300: 4.20953e5

GenotypeQuality
all individuals: 4687
bin: 6.25e1
variant carriers: 34

GenotypeQuality
all individuals: 528
bin: 3.25e1
variant carriers: 27

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 22

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 38

GenotypeQuality
all individuals: 332
bin: 7.75e1
variant carriers: 14

GenotypeQuality
all individuals: 247
bin: 3.75e1
variant carriers: 26

Latino
type: Population
allele count: 1
allele frequency: 1.385041551246537e-3
allele num: 722
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 2.380952380952381e-2
allele num: 126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4745
num of homozygotes: 0

African
type: Population
allele count: 159
allele frequency: 8.922558922558922e-2
allele num: 1782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 2.371541501976284e-2
allele num: 253
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.515151515151515e-2
allele num: 726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 234
allele frequency: 3.729678036340452e-2
allele num: 6274
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 5.752e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

DP
type: SiteQuality
SIO_000300: 4.62539e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.51e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.269e-1

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 245
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variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.893222264293828e-4
allele num: 5282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 197
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3106
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1809
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 655
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.21e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.43e-1

DP
type: SiteQuality
SIO_000300: 5.76212e5

FS
type: SiteQuality
SIO_000300: 4.6917e1

VQSLOD
type: SiteQuality
SIO_000300: -1.086e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.57e-1

QD
type: SiteQuality
SIO_000300: 1.306e1

GenotypeQuality
all individuals: 1608
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 725
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variant carriers: 0

GenotypeQuality
all individuals: 25855
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1989
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 227
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.855287569573284e-4
allele num: 5390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3459
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13599
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 773
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

FS
type: SiteQuality
SIO_000300: 6.021e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.025e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.68e-2

DP
type: SiteQuality
SIO_000300: 5.93089e5

QD
type: SiteQuality
SIO_000300: 5.77e0

VQSLOD
type: SiteQuality
SIO_000300: -1.341e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.122e0

GenotypeQuality
all individuals: 27453
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1771
bin: 1.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 408
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variant carriers: 0

GenotypeQuality
all individuals: 253
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variant carriers: 1

GenotypeQuality
all individuals: 1335
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2192
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.757859900717044e-4
allele num: 3626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 2.021699575443089e-4
allele num: 14839
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5477
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 241
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.19331e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.18e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
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variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 395
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variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16193
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2983
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 893
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3879
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 2.060156571899464e-3
allele num: 2427
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5582
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.387e1

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e0

FS
type: SiteQuality
SIO_000300: 1.9845e1

VQSLOD
type: SiteQuality
SIO_000300: -3.313e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.164e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-2

DP
type: SiteQuality
SIO_000300: 6.49016e5

GenotypeQuality
all individuals: 1720
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
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GenotypeQuality
all individuals: 750
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variant carriers: 0

GenotypeQuality
all individuals: 119
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variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3243
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 983
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5661
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2609
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4028
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.70179e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.84e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.848e1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

GenotypeQuality
all individuals: 464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4423
bin: 7.5e0
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GenotypeQuality
all individuals: 186
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variant carriers: 3

GenotypeQuality
all individuals: 18020
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GenotypeQuality
all individuals: 1558
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 3.134796238244514e-3
allele num: 319
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1621
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.016996031586964e-5
allele num: 24947
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3905
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5222
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 4.767959313413859e-4
allele num: 6292
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.2168e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.208e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.148e0

VQSLOD
type: SiteQuality
SIO_000300: -1.372e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

QD
type: SiteQuality
SIO_000300: 2.036e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 474
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GenotypeQuality
all individuals: 275
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variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 3.695491500369549e-4
allele num: 5412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6383
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1703
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5397
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4083
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 333
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26133
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.46044e5

FS
type: SiteQuality
SIO_000300: 1.003e0

VQSLOD
type: SiteQuality
SIO_000300: 7.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.15e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3777
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GenotypeQuality
all individuals: 112
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GenotypeQuality
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GenotypeQuality
all individuals: 119
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GenotypeQuality
all individuals: 188
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 3
allele frequency: 5.474452554744526e-4
allele num: 5480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26523
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.299e1

DP
type: SiteQuality
SIO_000300: 8.51744e5

VQSLOD
type: SiteQuality
SIO_000300: 7.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
all individuals: 485
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variant carriers: 0

GenotypeQuality
all individuals: 676
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variant carriers: 0

GenotypeQuality
all individuals: 1560
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GenotypeQuality
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GenotypeQuality
all individuals: 120
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GenotypeQuality
all individuals: 481
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5522
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 341
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.746019853905225e-5
allele num: 26695
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4163
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.66e0

DP
type: SiteQuality
SIO_000300: 8.56239e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 1.538e1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.206e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 575
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variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.49812734082397e-4
allele num: 6675
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29873
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 371
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2030
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4682
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

DP
type: SiteQuality
SIO_000300: 9.18829e5

ClippingRankSum
type: SiteQuality
SIO_000300: 8.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.954e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-2

QD
type: SiteQuality
SIO_000300: 1.063e1

MQRankSum
type: SiteQuality
SIO_000300: -1.554e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 326
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variant carriers: 1

GenotypeQuality
all individuals: 554
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variant carriers: 2

GenotypeQuality
all individuals: 563
bin: 5.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6321
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2055
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 1
allele frequency: 1.668613382279326e-4
allele num: 5993
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 48
allele frequency: 1.598188719451289e-3
allele num: 30034
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.23519e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.82e0

QD
type: SiteQuality
SIO_000300: 1.285e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.53e-2

GenotypeQuality
all individuals: 2174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6769
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.065262288310616e-4
allele num: 4842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2140
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

DP
type: SiteQuality
SIO_000300: 9.38774e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

QD
type: SiteQuality
SIO_000300: 1.324e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.4283e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.863e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

GenotypeQuality
all individuals: 311
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.054231717337716e-4
allele num: 4868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6792
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 9.42087e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
SIO_000300: 5.64e0

MQ
type: SiteQuality
SIO_000300: 5.522e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.26e-1

GenotypeQuality
all individuals: 470
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 3.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6793
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2153
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4869
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31042
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 9.137983551629607e-4
allele num: 6566
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 4.064e0

DP
type: SiteQuality
SIO_000300: 9.43595e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

VQSLOD
type: SiteQuality
SIO_000300: -2.806e-1

QD
type: SiteQuality
SIO_000300: 1.802e1

GenotypeQuality
all individuals: 482
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 401
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6335
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.107616768700084e-5
allele num: 32179
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6877
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4978
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

DP
type: SiteQuality
SIO_000300: 9.52288e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

FS
type: SiteQuality
SIO_000300: 1.245e0

QD
type: SiteQuality
SIO_000300: 1.106e1

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4963
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6871
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6319
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32039
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 2.14e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.47912e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

GenotypeQuality
all individuals: 260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1457
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1837
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5361
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27557
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4189
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.540357362908195e-4
allele num: 6492
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.237e1

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 8.01481e5

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.38e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11046
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5307
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.067484662576687e-3
allele num: 326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 1.154826377827334e-3
allele num: 25112
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

QD
type: SiteQuality
SIO_000300: 1.617e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.163e0

FS
type: SiteQuality
SIO_000300: 3.884e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

DP
type: SiteQuality
SIO_000300: 7.1789e5

GenotypeQuality
all individuals: 196
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 380
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.284673722096063e-5
allele num: 23339
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 303
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4337
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5011
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.004e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.54e-2

QD
type: SiteQuality
SIO_000300: 5.78e0

VQSLOD
type: SiteQuality
SIO_000300: -1.451e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.63555e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.84e-1

GenotypeQuality
all individuals: 6493
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2448
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37779
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3492
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.262307498106539e-4
allele num: 7922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47912
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10111
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.673e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

DP
type: SiteQuality
SIO_000300: 3.749627e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.29e-1

FS
type: SiteQuality
SIO_000300: 2.436e0

QD
type: SiteQuality
SIO_000300: 1.116e1

VQSLOD
type: SiteQuality
SIO_000300: 6.15e-1

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3505
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7116
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10115
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47919
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7921
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.08201687946332e-4
allele num: 9242
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.188e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

MQ
type: SiteQuality
SIO_000300: 5.942e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 3.752801e6

VQSLOD
type: SiteQuality
SIO_000300: 5.18e-1

GenotypeQuality
all individuals: 1834
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37778
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7169
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10115
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7921
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.163565556036348e-4
allele num: 9244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.832e1

VQSLOD
type: SiteQuality
SIO_000300: -1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e-1

DP
type: SiteQuality
SIO_000300: 3.753037e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

FS
type: SiteQuality
SIO_000300: 9.228e0

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.03e-2

GenotypeQuality
all individuals: 2714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2827
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7397
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.262466860244918e-4
allele num: 7921
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

MQ
type: SiteQuality
SIO_000300: 5.992e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.385e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 1.053e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.46e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.18e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

DP
type: SiteQuality
SIO_000300: 3.75583e6

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2825
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37779
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3507
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1435
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7921
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9241
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

FS
type: SiteQuality
SIO_000300: 2.582e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.73e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

DP
type: SiteQuality
SIO_000300: 3.755825e6

GenotypeQuality
all individuals: 2825
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37781
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1826
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47931
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.96501284838901e-4
allele num: 10118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4527
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9241
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.489e0

QD
type: SiteQuality
SIO_000300: 1.827e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.492e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

MQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

FS
type: SiteQuality
SIO_000300: 3.958e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.01e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

DP
type: SiteQuality
SIO_000300: 3.756723e6

GenotypeQuality
all individuals: 2443
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2716
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2825
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.884353069091628e-5
allele num: 10117
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47931
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.89e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.28e-2

QD
type: SiteQuality
SIO_000300: 3.182e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.757012e6

GenotypeQuality
all individuals: 2829
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1829
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37779
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47930
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.262307498106539e-4
allele num: 7922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9241
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.757111e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

FS
type: SiteQuality
SIO_000300: 2.126e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.209e0

VQSLOD
type: SiteQuality
SIO_000300: 4.57e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 1436
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7502
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2826
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086506562063138e-5
allele num: 47927
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.65e1

VQSLOD
type: SiteQuality
SIO_000300: 4.89e-1

FS
type: SiteQuality
SIO_000300: 3.323e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.184e0

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 3.757107e6

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9245
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.173013124126275e-5
allele num: 47927
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.61e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

DP
type: SiteQuality
SIO_000300: 3.756921e6

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

QD
type: SiteQuality
SIO_000300: 1.564e1

GenotypeQuality
all individuals: 2712
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7495
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3487
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2817
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.525252525252525e-4
allele num: 7920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9241
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10117
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.601e0

MQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

QD
type: SiteQuality
SIO_000300: 2.006e1

DP
type: SiteQuality
SIO_000300: 3.756616e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.92e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-1

FS
type: SiteQuality
SIO_000300: 9.526999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7433
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2804
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37779
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1806
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3483
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086854900978735e-5
allele num: 47919
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9237
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10115
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.69e-1

FS
type: SiteQuality
SIO_000300: 2.377e0

QD
type: SiteQuality
SIO_000300: 1.459e1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

DP
type: SiteQuality
SIO_000300: 3.755927e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.76e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37779
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2698
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7384
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.977652526451103e-4
allele num: 10113
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.051780752715333e-4
allele num: 7918
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47911
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9235
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.907e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.679999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.04e-1

QD
type: SiteQuality
SIO_000300: 1.628e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-1

DP
type: SiteQuality
SIO_000300: 3.754765e6

GenotypeQuality
all individuals: 7379
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2790
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37776
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9233
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.02571860816944e-4
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087334056942473e-5
allele num: 47908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.754479e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e0

VQSLOD
type: SiteQuality
SIO_000300: -1.857e0

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

FS
type: SiteQuality
SIO_000300: 4.185e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

QD
type: SiteQuality
SIO_000300: 2.167e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-2

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37776
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2790
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7249
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variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.888262632255513e-5
allele num: 10113
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.008e1

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 3.753446e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7917
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10113
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.164736443338024e-4
allele num: 9239
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

FS
type: SiteQuality
SIO_000300: 8.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.137e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.83e-2

DP
type: SiteQuality
SIO_000300: 3.75205e6

MQ
type: SiteQuality
SIO_000300: 5.923e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

QD
type: SiteQuality
SIO_000300: 1.809e1

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2683
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7074
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2775
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7917
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6609
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.08283703302653e-4
allele num: 9235
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10113
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.055e0

FS
type: SiteQuality
SIO_000300: 4.333e0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e0

DP
type: SiteQuality
SIO_000300: 3.750806e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.475e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.027e1

GenotypeQuality
all individuals: 97
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6127
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37769
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9233
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.263104711380573e-4
allele num: 7917
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.697e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.355e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 3.741828e6

QD
type: SiteQuality
SIO_000300: 1.627e1

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.9e-2

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37765
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 2435
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1424
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

East Asian
type: Population
allele count: 34
allele frequency: 5.147615442846329e-3
allele num: 6605
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10111
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9229
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

FS
type: SiteQuality
SIO_000300: 3.273e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.977e1

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.525e-1

DP
type: SiteQuality
SIO_000300: 3.736888e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

GenotypeQuality
all individuals: 2026
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6182
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36065
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1500
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 2.092487968194183e-4
allele num: 47790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6617
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8499
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4484
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.989258006763477e-4
allele num: 10054
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 5.457919441109049e-4
allele num: 9161
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e0

MQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.248e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e-1

DP
type: SiteQuality
SIO_000300: 1.738329e6

QD
type: SiteQuality
SIO_000300: 2.339e1

GenotypeQuality
all individuals: 452
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
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GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
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variant carriers: 0

GenotypeQuality
all individuals: 6127
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10059
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.093276396215356e-5
allele num: 47772
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9157
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4481
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6611
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.41e0

QD
type: SiteQuality
SIO_000300: 1.39e1

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 1.743081e6

GenotypeQuality
all individuals: 240
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
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variant carriers: 0

GenotypeQuality
all individuals: 450
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variant carriers: 0

GenotypeQuality
all individuals: 6115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4674
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4491
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6621
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.176470588235294e-4
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47825
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9167
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.860000000000001e-1

FS
type: SiteQuality
SIO_000300: 5.23e-1

DP
type: SiteQuality
SIO_000300: 1.75493e6

QD
type: SiteQuality
SIO_000300: 1.11e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.341e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 648
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 6113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
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variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9169
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6623
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.090869174315763e-5
allele num: 47827
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10063
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

DP
type: SiteQuality
SIO_000300: 1.760019e6

VQSLOD
type: SiteQuality
SIO_000300: 9.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.196e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.39e-2

FS
type: SiteQuality
SIO_000300: 1.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

MQ
type: SiteQuality
SIO_000300: 6.103e1

QD
type: SiteQuality
SIO_000300: 2.823e1

GenotypeQuality
all individuals: 178
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 448
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.75e1
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GenotypeQuality
all individuals: 648
bin: 9.25e1
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GenotypeQuality
all individuals: 6150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.983930165658169e-4
allele num: 10081
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9177
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.26e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.389e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

QD
type: SiteQuality
SIO_000300: 1.561e1

DP
type: SiteQuality
SIO_000300: 1.770811e6

GenotypeQuality
all individuals: 648
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4673
bin: 9.75e1
variant carriers: 8

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.919650828290844e-5
allele num: 10081
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9177
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 9.40402021864347e-4
allele num: 8507
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4495
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.561e1

DP
type: SiteQuality
SIO_000300: 1.770811e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.26e0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.389e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43571
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.910802775024777e-5
allele num: 10090
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 3.827e0

VQSLOD
type: SiteQuality
SIO_000300: -9.3e-2

DP
type: SiteQuality
SIO_000300: 1.775314e6

QD
type: SiteQuality
SIO_000300: 1.022e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeQuality
all individuals: 6205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47911
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.507613447911955e-4
allele num: 6633
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10099
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.212e0

VQSLOD
type: SiteQuality
SIO_000300: -2.613e0

DP
type: SiteQuality
SIO_000300: 1.777497e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

QD
type: SiteQuality
SIO_000300: 8.52e0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.24e-1

GenotypeQuality
all individuals: 649
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4666
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4497
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10099
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087116231502932e-5
allele num: 47913
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6633
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

DP
type: SiteQuality
SIO_000300: 1.777457e6

QD
type: SiteQuality
SIO_000300: 3.115e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.22e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.754e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43713
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4669
bin: 9.75e1
variant carriers: 14

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9185
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.922633710492255e-4
allele num: 47902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.910802775024777e-5
allele num: 10090
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.52e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.226e-1

DP
type: SiteQuality
SIO_000300: 1.77868e6

MQRankSum
type: SiteQuality
SIO_000300: 8.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.595e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.174e1

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43647
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1830
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.921619208254787e-5
allele num: 10079
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088423866507947e-5
allele num: 47883
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9187
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4496
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

FS
type: SiteQuality
SIO_000300: 3.371e0

VQSLOD
type: SiteQuality
SIO_000300: -3.93e-2

QD
type: SiteQuality
SIO_000300: 1.332e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.777281e6

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43566
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.461927237792907e-4
allele num: 47882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.865e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.32e-1

DP
type: SiteQuality
SIO_000300: 1.776458e6

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

QD
type: SiteQuality
SIO_000300: 2.026e1

VQSLOD
type: SiteQuality
SIO_000300: 5.49e0

GenotypeQuality
all individuals: 1566
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42856
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4651
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.094635638130747e-5
allele num: 47741
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8489
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9967
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.969e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.768542e6

MQ
type: SiteQuality
SIO_000300: 5.868e1

VQSLOD
type: SiteQuality
SIO_000300: -2.543e0

FS
type: SiteQuality
SIO_000300: 1.5415e1

QD
type: SiteQuality
SIO_000300: 1.593e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.152e0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4653
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1020
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42914
bin: 6.25e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 1.091703056768559e-4
allele num: 9160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47739
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.649193073389092e-3
allele num: 8489
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9969
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.566e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.769085e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.656e1

VQSLOD
type: SiteQuality
SIO_000300: 4.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7422
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4948
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8822
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.207729468599034e-4
allele num: 8280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4215
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.637072e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.99e-1

FS
type: SiteQuality
SIO_000300: 1.624e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.757e0

VQSLOD
type: SiteQuality
SIO_000300: 3.93e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.412e0

QD
type: SiteQuality
SIO_000300: 1.093e1

GenotypeQuality
all individuals: 645
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8740
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4622
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 414
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9229
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8231
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4163
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.477979535633522e-5
allele num: 44663
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8753
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

FS
type: SiteQuality
SIO_000300: 8.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.653e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.058e1

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-1

DP
type: SiteQuality
SIO_000300: 1.612535e6

GenotypeQuality
all individuals: 689
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 4705
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4617
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 33745
bin: 6.25e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.41721053903795e-4
allele num: 4137
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6217
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 2.025567158804465e-4
allele num: 44432
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

FS
type: SiteQuality
SIO_000300: 1.416e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

DP
type: SiteQuality
SIO_000300: 1.601475e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: 4.08e-1

QD
type: SiteQuality
SIO_000300: 1.762e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

GenotypeQuality
all individuals: 4599
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4307
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 569
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.649076517150396e-4
allele num: 6064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43277
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4034
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8998
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.183e0

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.987e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

QD
type: SiteQuality
SIO_000300: 1.176e1

MQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

DP
type: SiteQuality
SIO_000300: 1.547127e6

GenotypeQuality
all individuals: 1059
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 916
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4014
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28268
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4593
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 642
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8043
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5900
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 6.795016987542468e-4
allele num: 8830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3929
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.4898e1

DP
type: SiteQuality
SIO_000300: 1.49977e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.997e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

QD
type: SiteQuality
SIO_000300: 1.882e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.726e0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4611
bin: 9.75e1
variant carriers: 73

GenotypeQuality
all individuals: 1037
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 231
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 802
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 209
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 348
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 592
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 986
bin: 7.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.838046396864946e-5
allele num: 41339
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8698
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 6.079027355623101e-4
allele num: 8225
num of homozygotes: 0

African
type: Population
allele count: 89
allele frequency: 1.119637690275506e-2
allele num: 7949
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5797
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3844
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-1

FS
type: SiteQuality
SIO_000300: 1.543e0

QD
type: SiteQuality
SIO_000300: 1.739e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

DP
type: SiteQuality
SIO_000300: 1.463074e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1