18-55238865-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55238865
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55238865
    reference: chr 18
allele count: 1
allele frequency: 9.333059563586135e-6
allele num: 107146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.99-93A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.315-30A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.315-93A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.267-30A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.315-93A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.333-93A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.315-93A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17476
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4990
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15908
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7033
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ

18-55238870-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55238870
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55238870
    reference: chr 18
allele count: 1
allele frequency: 9.545810343840089e-6
allele num: 104758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.315-98C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.315-98C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.99-98C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.315-98C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.315-35C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.333-98C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.267-35C>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19609
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5980
  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2111
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 604
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5730
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

18-55238875-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55238875
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55238875
    reference: chr 18
allele count: 1
allele frequency: 9.842907201070908e-6
allele num: 101596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.315-103G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.333-103G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.315-103G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.99-103G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.267-40G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.315-40G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.315-103G>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6113
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5736
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS

18-55238883-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55238883
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55238883
    reference: chr 18
allele count: 1
allele frequency: 1.028785415937944e-5
allele num: 97202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.315-111C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.267-48C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.333-111C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.315-111C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.99-111C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.315-111C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.315-48C>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8574
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16175
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5683
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

18-55240435-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240435
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240435
    reference: chr 18
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+43A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+43A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.358A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+43A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.409A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+43A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+43A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+43A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+43A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6776
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/18-55240443-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240443
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240443
    reference: chr 18
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+35G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.401G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+35G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+35G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.350G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+35G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+35G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+35G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+35G>T
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

18-55240447-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240447
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240447
    reference: chr 18
allele count: 4
allele frequency: 3.295381522795802e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+31C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+31C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+31C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+31C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.397C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+31C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.346C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+31C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+31C>T
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

18-55240449-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240449
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240449
    reference: chr 18
allele count: 3
allele frequency: 2.471495419495156e-5
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+29A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+29A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.395A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+29A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+29A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+29A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+29A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.344A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+29A>C
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

18-55240450-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240450
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240450
    reference: chr 18
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+28T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+28T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+28T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+28T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+28T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.394T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+28T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.343T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+28T>C
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

18-55240454-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240454
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240454
    reference: chr 18
allele count: 7
allele frequency: 5.766632616074076e-5
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+24A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+24A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+24A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+24A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+24A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+24A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.390A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.339A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+24A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6776
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

18-55240455-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240455
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240455
    reference: chr 18
allele count: 120809
allele frequency: 9.950826153567369e-1
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+23A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+23A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.338A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+23A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.389A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+23A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+23A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+23A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+23A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 7.75e1
  variant carriers: 4020
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 8.25e1
  variant carriers: 3224
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 2330
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.75e1
  variant carriers: 579
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4903
  bin: 5.25e1
  variant carriers: 4901
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.25e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 9.25e1
  variant carriers: 2018
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 6.75e1
  variant carriers: 5147
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 8.75e1
  variant carriers: 2568
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 5.75e1
  variant carriers: 5200
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 4.25e1
  variant carriers: 3251
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 4.75e1
  variant carriers: 4275
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 3.25e1
  variant carriers: 1264
genotype depth: GenotypeDepth
  all individuals: 5439
  bin: 6.25e1
  variant carriers: 5439
genotype depth: GenotypeDepth
  all individuals: 11404
  bin: 9.75e1
  variant carriers: 11404
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 7.25e1
  variant carriers: 4797
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 60121
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

18-55240456-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240456
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240456
    reference: chr 18
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.337C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.388C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+22C>T
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

18-55240456-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240456
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240456
    reference: chr 18
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+22C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+22C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+22C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.388C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.337C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+22C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+22C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+22C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+22C>G
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

18-55240461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240461
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240461
    reference: chr 18
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+17C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+17C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+17C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.332C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+17C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+17C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.383C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+17C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+17C>T
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50853
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

18-55240463-T-TTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240463
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240465
    reference: chr 18
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: TTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+13_314+14dupTA
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+13_314+14dupTA
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+13_314+14dupTA
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+13_314+14dupTA
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+13_332+14dupTA
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.379_380dupTA
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.328_329dupTA
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+13_266+14dupTA
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+13_98+14dupTA
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50852
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/18-55240471-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240471
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240471
    reference: chr 18
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+7T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+7T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+7T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+7T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+7T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+7T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+7T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.373T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.322T>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4662
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50851
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 6.75e1
  variant carriers: 0
hgvs: c.332+7T>G
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

18-55240471-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240471
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240471
    reference: chr 18
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+7T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+7T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+7T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.322T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+7T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+7T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+7T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+7T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.373T>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
hgvs: c.332+7T>C
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/18-55240476-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240476
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240476
    reference: chr 18
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314+2T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314+2T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98+2T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.317T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314+2T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332+2T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.368T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314+2T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266+2T>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50849
  bin: 9.75e1
  variant carriers: 2
hgvs: c.332+2T>G
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

18-55240478-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240478
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240478
    reference: chr 18
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.266A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.314A>G
  hgvsp: ENSP00000465717.1:p.Asn105Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.314A>G
  hgvsp: ENSP00000465243.1:p.Lys105Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.332A>G
  hgvsp: ENSP00000372326.3:p.Asn111Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.314A>G
  hgvsp: ENSP00000262093.5:p.Asn105Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.98A>G
  hgvsp: ENSP00000467461.1:p.Asn33Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.314A>G
  hgvsp: ENSP00000466263.1:p.Asn105Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.315A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.366A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn111Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

18-55240488-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240488
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240488
    reference: chr 18
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.304C>G
  hgvsp: ENSP00000262093.5:p.Pro102Ala
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.304C>G
  hgvsp: ENSP00000466263.1:p.Pro102Ala
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.356C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.304C>G
  hgvsp: ENSP00000465717.1:p.Pro102Ala
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.305C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.256C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.322C>G
  hgvsp: ENSP00000372326.3:p.Pro108Ala
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.88C>G
  hgvsp: ENSP00000467461.1:p.Pro30Ala
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.304C>G
  hgvsp: ENSP00000465243.1:p.Pro102Ala
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50844
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2289
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro108Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD

18-55240489-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240489
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240489
    reference: chr 18
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.303T>C
  hgvsp: ENST00000262093.5:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.87T>C
  hgvsp: ENST00000591215.1:c.87T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.303T>C
  hgvsp: ENST00000592699.1:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.303T>C
  hgvsp: ENST00000585747.1:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.255T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.303T>C
  hgvsp: ENST00000585494.1:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.355T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.321T>C
  hgvsp: ENST00000382873.3:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.304T>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50844
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu107Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

18-55240501-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240501
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240501
    reference: chr 18
allele count: 93
allele frequency: 7.660373628546012e-4
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.243C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.343C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.75C>T
  hgvsp: ENST00000591215.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.291C>T
  hgvsp: ENST00000592699.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.309C>T
  hgvsp: ENST00000382873.3:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.291C>T
  hgvsp: ENST00000585494.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.292C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.291C>T
  hgvsp: ENST00000585747.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.291C>T
  hgvsp: ENST00000262093.5:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 9.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp103Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

18-55240504-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240504
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240504
    reference: chr 18
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.288A>C
  hgvsp: ENST00000262093.5:c.288A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.240A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.72A>C
  hgvsp: ENST00000591215.1:c.72A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.288A>C
  hgvsp: ENST00000585747.1:c.288A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.288A>C
  hgvsp: ENST00000585494.1:c.288A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.288A>C
  hgvsp: ENST00000592699.1:c.288A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.289A>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.306A>C
  hgvsp: ENST00000382873.3:c.306A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.340A>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg102Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

18-55240505-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240505
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240505
    reference: chr 18
allele count: 12493
allele frequency: 1.029128292996359e-1
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.339G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.287G>A
  hgvsp: ENSP00000466263.1:p.Arg96Gln
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.305G>A
  hgvsp: ENSP00000372326.3:p.Arg102Gln
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.287G>A
  hgvsp: ENSP00000465717.1:p.Arg96Gln
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.287G>A
  hgvsp: ENSP00000262093.5:p.Arg96Gln
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.71G>A
  hgvsp: ENSP00000467461.1:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.239G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.287G>A
  hgvsp: ENSP00000465243.1:p.Arg96Gln
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.288G>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 5.25e1
  variant carriers: 530
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 3.75e1
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 3.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 8.25e1
  variant carriers: 862
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 6.75e1
  variant carriers: 758
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 5.75e1
  variant carriers: 653
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 6.25e1
  variant carriers: 757
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 8.75e1
  variant carriers: 756
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7889
  bin: 9.75e1
  variant carriers: 3973
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 7.75e1
  variant carriers: 889
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 4.25e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 9.25e1
  variant carriers: 721
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 7.25e1
  variant carriers: 880
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 4.75e1
  variant carriers: 383
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg102Gln
num of homozygotes: 846
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/18-55240515-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240515
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240515
    reference: chr 18
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.229T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.277T>G
  hgvsp: ENSP00000262093.5:p.Phe93Val
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.277T>G
  hgvsp: ENSP00000466263.1:p.Phe93Val
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.61T>G
  hgvsp: ENSP00000467461.1:p.Phe21Val
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.295T>G
  hgvsp: ENSP00000372326.3:p.Phe99Val
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.277T>G
  hgvsp: ENSP00000465717.1:p.Phe93Val
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.277T>G
  hgvsp: ENSP00000465243.1:p.Phe93Val
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.278T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.329T>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe99Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum

18-55240519-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240519
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240519
    reference: chr 18
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.291A>G
  hgvsp: ENST00000382873.3:c.291A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.273A>G
  hgvsp: ENST00000585494.1:c.273A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.57A>G
  hgvsp: ENST00000591215.1:c.57A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.273A>G
  hgvsp: ENST00000592699.1:c.273A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.225A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.273A>G
  hgvsp: ENST00000262093.5:c.273A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.274A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.325A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.273A>G
  hgvsp: ENST00000585747.1:c.273A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg97Arg
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

18-55240531-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240531
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240531
    reference: chr 18
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.261C>A
  hgvsp: ENSP00000465717.1:p.Asp87Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.261C>A
  hgvsp: ENSP00000466263.1:p.Asp87Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.261C>A
  hgvsp: ENSP00000465243.1:p.Asp87Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.261C>A
  hgvsp: ENSP00000262093.5:p.Asp87Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.313C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.262C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.213C>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.279C>A
  hgvsp: ENSP00000372326.3:p.Asp93Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.45C>A
  hgvsp: ENSP00000467461.1:p.Asp15Glu
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp93Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

18-55240533-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240533
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240533
    reference: chr 18
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.43G>C
  hgvsp: ENSP00000467461.1:p.Asp15His
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.277G>C
  hgvsp: ENSP00000372326.3:p.Asp93His
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.259G>C
  hgvsp: ENSP00000262093.5:p.Asp87His
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.311G>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.259G>C
  hgvsp: ENSP00000465243.1:p.Asp87His
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.259G>C
  hgvsp: ENSP00000466263.1:p.Asp87His
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.260G>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.259G>C
  hgvsp: ENSP00000465717.1:p.Asp87His
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.211G>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2046
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp93His
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

18-55240533-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240533
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240533
    reference: chr 18
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.43G>A
  hgvsp: ENSP00000467461.1:p.Asp15Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.277G>A
  hgvsp: ENSP00000372326.3:p.Asp93Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.259G>A
  hgvsp: ENSP00000262093.5:p.Asp87Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.211G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.259G>A
  hgvsp: ENSP00000465717.1:p.Asp87Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.259G>A
  hgvsp: ENSP00000465243.1:p.Asp87Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.260G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.259G>A
  hgvsp: ENSP00000466263.1:p.Asp87Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.311G>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5121
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49602
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp93Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

18-55240534-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240534
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240534
    reference: chr 18
allele count: 4
allele frequency: 3.295055768818887e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.310C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.42C>T
  hgvsp: ENST00000591215.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.258C>T
  hgvsp: ENST00000592699.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.259C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.210C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.258C>T
  hgvsp: ENST00000585494.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.258C>T
  hgvsp: ENST00000585747.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.258C>T
  hgvsp: ENST00000262093.5:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.276C>T
  hgvsp: ENST00000382873.3:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His92His
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

18-55240539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240539
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240539
    reference: chr 18
allele count: 4
allele frequency: 3.29489291598023e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.205G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.253G>A
  hgvsp: ENSP00000262093.5:p.Val85Ile
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.253G>A
  hgvsp: ENSP00000465243.1:p.Val85Ile
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.37G>A
  hgvsp: ENSP00000467461.1:p.Val13Ile
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.305G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.271G>A
  hgvsp: ENSP00000372326.3:p.Val91Ile
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.253G>A
  hgvsp: ENSP00000465717.1:p.Val85Ile
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.254G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.253G>A
  hgvsp: ENSP00000466263.1:p.Val85Ile
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val91Ile
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

18-55240540-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240540
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240540
    reference: chr 18
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.252T>A
  hgvsp: ENSP00000262093.5:p.Asp84Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.253T>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.252T>A
  hgvsp: ENSP00000465717.1:p.Asp84Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.36T>A
  hgvsp: ENSP00000467461.1:p.Asp12Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.270T>A
  hgvsp: ENSP00000372326.3:p.Asp90Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.252T>A
  hgvsp: ENSP00000465243.1:p.Asp84Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.304T>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.252T>A
  hgvsp: ENSP00000466263.1:p.Asp84Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.204T>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp90Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

18-55240542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240542
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240542
    reference: chr 18
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.302G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.250G>A
  hgvsp: ENSP00000466263.1:p.Asp84Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.250G>A
  hgvsp: ENSP00000262093.5:p.Asp84Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.268G>A
  hgvsp: ENSP00000372326.3:p.Asp90Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.251G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.34G>A
  hgvsp: ENSP00000467461.1:p.Asp12Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.250G>A
  hgvsp: ENSP00000465717.1:p.Asp84Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.250G>A
  hgvsp: ENSP00000465243.1:p.Asp84Asn
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.202G>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp90Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

18-55240545-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240545
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240545
    reference: chr 18
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.247G>A
  hgvsp: ENSP00000465243.1:p.Gly83Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.247G>A
  hgvsp: ENSP00000466263.1:p.Gly83Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.31G>A
  hgvsp: ENSP00000467461.1:p.Gly11Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.247G>A
  hgvsp: ENSP00000465717.1:p.Gly83Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.299G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.248G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.265G>A
  hgvsp: ENSP00000372326.3:p.Gly89Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.199G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.247G>A
  hgvsp: ENSP00000262093.5:p.Gly83Arg
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly89Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

18-55240566-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240566
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240566
    reference: chr 18
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.226A>T
  hgvsp: ENSP00000262093.5:p.Met76Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.227A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.278A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.244A>T
  hgvsp: ENSP00000372326.3:p.Met82Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.226A>T
  hgvsp: ENSP00000466263.1:p.Met76Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.10A>T
  hgvsp: ENSP00000467461.1:p.Met4Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.178A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.226A>T
  hgvsp: ENSP00000465717.1:p.Met76Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.226A>T
  hgvsp: ENSP00000465243.1:p.Met76Leu
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met82Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

18-55240576-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240576
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240577
    reference: chr 18
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.233dupT
  hgvsp: ENSP00000372326.3:p.Leu78PhefsTer9
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.215dupT
  hgvsp: ENSP00000465717.1:p.Leu72PhefsTer9
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.216dupT
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.215dupT
  hgvsp: ENSP00000465243.1:p.Leu72PhefsTer9
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.267dupT
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.167dupT
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.215dupT
  hgvsp: ENSP00000262093.5:p.Leu72PhefsTer9
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-2dupT
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.215dupT
  hgvsp: ENSP00000466263.1:p.Leu72PhefsTer9
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu78PhefsTer9
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

18-55240590-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240590
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240590
    reference: chr 18
allele count: 3
allele frequency: 2.476800634060962e-5
allele num: 121124
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.254A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.220A>G
  hgvsp: ENSP00000372326.3:p.Lys74Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.154A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.202A>G
  hgvsp: ENSP00000262093.5:p.Lys68Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.202A>G
  hgvsp: ENSP00000465717.1:p.Lys68Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.202A>G
  hgvsp: ENSP00000465243.1:p.Lys68Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.202A>G
  hgvsp: ENSP00000466263.1:p.Lys68Glu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-15A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.203A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys74Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ

18-55240591-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240591
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240591
    reference: chr 18
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.201G>C
  hgvsp: ENST00000262093.5:c.201G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.202G>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.253G>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.219G>C
  hgvsp: ENST00000382873.3:c.219G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.201G>C
  hgvsp: ENST00000585494.1:c.201G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.201G>C
  hgvsp: ENST00000592699.1:c.201G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.201G>C
  hgvsp: ENST00000585747.1:c.201G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-16G>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.153G>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro73Pro
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

18-55240591-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240591
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240591
    reference: chr 18
allele count: 25
allele frequency: 2.06434139252213e-4
allele num: 121104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.153G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.219G>A
  hgvsp: ENST00000382873.3:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.253G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.201G>A
  hgvsp: ENST00000585494.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.201G>A
  hgvsp: ENST00000592699.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.201G>A
  hgvsp: ENST00000262093.5:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.201G>A
  hgvsp: ENST00000585747.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.202G>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6506
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro73Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

18-55240592-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240592
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240592
    reference: chr 18
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.218C>T
  hgvsp: ENSP00000372326.3:p.Pro73Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.200C>T
  hgvsp: ENSP00000262093.5:p.Pro67Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.201C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.252C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.200C>T
  hgvsp: ENSP00000466263.1:p.Pro67Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.200C>T
  hgvsp: ENSP00000465717.1:p.Pro67Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.152C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.200C>T
  hgvsp: ENSP00000465243.1:p.Pro67Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-17C>T
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49592
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro73Leu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

18-55240601-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240601
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240601
    reference: chr 18
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-4A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-4A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-4A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-4A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-4A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-4A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-4A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-4A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-4A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 6.75e1
  variant carriers: 0
hgvs: c.213-4A>G
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

18-55240602-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240602
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240602
    reference: chr 18
allele count: 1
allele frequency: 8.271435424903638e-6
allele num: 120898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-5T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-5T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-5T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-5T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-5T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-5T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-5T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-5T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-5T>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
hgvs: c.213-5T>C
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

18-55240608-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240608
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240608
    reference: chr 18
allele count: 1
allele frequency: 8.274857672448034e-6
allele num: 120848
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-11A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-11A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-11A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-11A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-11A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-11A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-11A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-11A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-11A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49587
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

18-55240618-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240618
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240618
    reference: chr 18
allele count: 107
allele frequency: 8.865982798336178e-4
allele num: 120686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-21G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-21G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-21G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-21G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-21G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-21G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-21G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-21G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-21G>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4991
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

18-55240619-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240619
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240619
    reference: chr 18
allele count: 5
allele frequency: 4.143669302040343e-5
allele num: 120666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-22C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-22C>T
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

18-55240626-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240626
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240626
    reference: chr 18
allele count: 1
allele frequency: 8.295863682367972e-6
allele num: 120542
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-29A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-29A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-29A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-29A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-29A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-29A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-29A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-29A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-29A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

18-55240632-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240632
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240632
    reference: chr 18
allele count: 1
allele frequency: 8.302337938363443e-6
allele num: 120448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-35G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-35G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-35G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-35G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-35G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-35G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-35G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-35G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-35G>A
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

18-55240641-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240641
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240641
    reference: chr 18
allele count: 1
allele frequency: 8.3166999334664e-6
allele num: 120240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-44A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-44A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-44A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-44A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-44A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-44A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-44A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-44A>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-44A>T
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

18-55240647-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55240647
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55240647
    reference: chr 18
allele count: 2
allele frequency: 1.66461364317342e-5
allele num: 120148
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.195-50A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-22-50A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.195-50A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.196-50A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.195-50A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.195-50A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.147-50A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.213-50A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.247-50A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP

18-55247237-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247237
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247237
    reference: chr 18
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+68C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.212+50C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.246+50C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+68C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+68C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+68C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+68C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+68C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6549C>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

18-55247248-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247248
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247248
    reference: chr 18
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6538A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+57A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+57A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.246+39A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+57A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+57A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.212+39A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+57A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+57A>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

18-55247259-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247259
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247259
    reference: chr 18
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+46T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6527T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+46T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+46T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.246+28T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+46T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+46T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+46T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.212+28T>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2099
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23712
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD

18-55247262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247262
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247262
    reference: chr 18
allele count: 910
allele frequency: 7.495140513293579e-3
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+43C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+43C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+43C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6524C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.246+25C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+43C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+43C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+43C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.212+25C>T
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11040
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 14216
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 8.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 7.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 9.75e1
  variant carriers: 484
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 9.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 6.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4630
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 7.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 5.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2373
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 26
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

18-55247265-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247265
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247265
    reference: chr 18
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+40T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.212+22T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+40T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+40T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+40T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.246+22T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6521T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+40T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+40T>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

18-55247268-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247268
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247268
    reference: chr 18
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+37C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+37C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.246+19C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+37C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+37C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+37C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6518C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.212+19C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+37C>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19311
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/18-55247269-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247269
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247269
    reference: chr 18
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+36T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6517T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+36T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.246+18T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+36T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+36T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+36T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.212+18T>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+36T>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

18-55247285-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247285
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247285
    reference: chr 18
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.246+2T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+20T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+20T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.212+2T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+20T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+20T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+20T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6501T>C
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+20T>C
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19316
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5964
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 8.25e1
  variant carriers: 0
hgvs: c.212+2T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

18-55247296-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247296
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247296
    reference: chr 18
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6490C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+9C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+9C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+9C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.203C>G
  hgvsp: ENSP00000372326.3:p.Ser68Cys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+9C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.237C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+9C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+9C>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser68Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

18-55247298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247298
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247298
    reference: chr 18
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+7G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.201G>A
  hgvsp: ENST00000382873.3:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6488G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+7G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.235G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+7G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+7G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+7G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+7G>A
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: c.194+7G>A
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/18-55247304-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247304
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247304
    reference: chr 18
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23+1G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.229G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195+1G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6482G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194+1G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.195G>T
  hgvsp: ENSP00000372326.3:p.Arg65Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194+1G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194+1G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194+1G>T
  variant of: http://identifiers.org/hgnc/3647
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5963
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: c.194+1G>T
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

18-55247305-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247305
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247305
    reference: chr 18
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.194G>A
  hgvsp: ENSP00000262093.5:p.Arg65Lys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.194G>A
  hgvsp: ENSP00000465243.1:p.Arg65Lys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.195G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6481G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.194G>A
  hgvsp: ENSP00000466263.1:p.Arg65Lys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.194G>A
  hgvsp: ENSP00000465717.1:p.Arg65Lys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.228G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.194G>A
  hgvsp: ENSP00000372326.3:p.Arg65Lys
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4198
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23370
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Arg65Lys
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

18-55247313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247313
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247313
    reference: chr 18
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.220G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.186G>A
  hgvsp: ENST00000585747.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.186G>A
  hgvsp: ENST00000382873.3:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.187G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-31G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6473G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.186G>A
  hgvsp: ENST00000262093.5:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.186G>A
  hgvsp: ENST00000592699.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.186G>A
  hgvsp: ENST00000585494.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19326
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5962
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro62Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

18-55247314-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247314
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247314
    reference: chr 18
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.219C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.185C>T
  hgvsp: ENSP00000262093.5:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.185C>T
  hgvsp: ENSP00000465717.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.185C>T
  hgvsp: ENSP00000372326.3:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.186C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.185C>T
  hgvsp: ENSP00000465243.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.185C>T
  hgvsp: ENSP00000466263.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6472C>T
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23367
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5962
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro62Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

18-55247314-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247314
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247314
    reference: chr 18
allele count: 96
allele frequency: 7.906961420617402e-4
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6472C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.185C>G
  hgvsp: ENSP00000465243.1:p.Pro62Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.186C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.185C>G
  hgvsp: ENSP00000466263.1:p.Pro62Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.185C>G
  hgvsp: ENSP00000465717.1:p.Pro62Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.185C>G
  hgvsp: ENSP00000372326.3:p.Pro62Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.219C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.185C>G
  hgvsp: ENSP00000262093.5:p.Pro62Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-32C>G
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 9.75e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro62Arg
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

18-55247316-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247316
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247316
    reference: chr 18
allele count: 68
allele frequency: 5.600764339603993e-4
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.217A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.184A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.183A>G
  hgvsp: ENST00000585494.1:c.183A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.183A>G
  hgvsp: ENST00000262093.5:c.183A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.183A>G
  hgvsp: ENST00000382873.3:c.183A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.183A>G
  hgvsp: ENST00000592699.1:c.183A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-34A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6470A>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.183A>G
  hgvsp: ENST00000585747.1:c.183A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4409
  bin: 9.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23294
  bin: 9.75e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 19376
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln61Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

18-55247326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247326
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247326
    reference: chr 18
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.174C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6460C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.173C>T
  hgvsp: ENSP00000466263.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.173C>T
  hgvsp: ENSP00000262093.5:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-44C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.173C>T
  hgvsp: ENSP00000465717.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.207C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.173C>T
  hgvsp: ENSP00000372326.3:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.173C>T
  hgvsp: ENSP00000465243.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro58Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/18-55247336-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247336
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247336
    reference: chr 18
allele count: 2693
allele frequency: 2.218103945309283e-2
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.163G>T
  hgvsp: ENSP00000262093.5:p.Gly55Cys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-54G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.163G>T
  hgvsp: ENSP00000466263.1:p.Gly55Cys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.163G>T
  hgvsp: ENSP00000465243.1:p.Gly55Cys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.163G>T
  hgvsp: ENSP00000372326.3:p.Gly55Cys
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.197G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.164G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6450G>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.163G>T
  hgvsp: ENSP00000465717.1:p.Gly55Cys
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11138
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 6.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6059
  bin: 9.75e1
  variant carriers: 2252
genotype depth: GenotypeDepth
  all individuals: 14322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 8.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5972
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly55Cys
num of homozygotes: 54
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

18-55247336-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247336
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247336
    reference: chr 18
allele count: 98
allele frequency: 8.071822749361668e-4
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.163G>A
  hgvsp: ENSP00000465243.1:p.Gly55Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.163G>A
  hgvsp: ENSP00000465717.1:p.Gly55Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.164G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.197G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.163G>A
  hgvsp: ENSP00000372326.3:p.Gly55Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6450G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.163G>A
  hgvsp: ENSP00000262093.5:p.Gly55Ser
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-54G>A
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.163G>A
  hgvsp: ENSP00000466263.1:p.Gly55Ser
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6059
  bin: 9.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2125
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5972
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly55Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

18-55247348-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247348
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247348
    reference: chr 18
allele count: 3
allele frequency: 2.470966147763776e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.151C>T
  hgvsp: ENSP00000466263.1:p.Gln51Ter
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.151C>T
  hgvsp: ENSP00000465717.1:p.Gln51Ter
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.151C>T
  hgvsp: ENSP00000262093.5:p.Gln51Ter
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6438C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.152C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.185C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.151C>T
  hgvsp: ENSP00000372326.3:p.Gln51Ter
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-66C>T
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.151C>T
  hgvsp: ENSP00000465243.1:p.Gln51Ter
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln51Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

18-55247359-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55247359
    reference: chr 18
  end: Position
    type: ExactPosition
    position: 55247359
    reference: chr 18
allele count: 30
allele frequency: 2.471006852925672e-4
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585878
  gene symbol: FECH
  hgvsc: ENST00000585878.1:n.174C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000467461
  ensembl transcript: ENST00000591215
  gene symbol: FECH
  hgvsc: ENST00000591215.1:c.-77C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000585699
  gene symbol: FECH
  hgvsc: ENST00000585699.1:n.146+6427C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066926
  ensembl transcript: ENST00000592111
  gene symbol: FECH
  hgvsc: ENST00000592111.1:n.141C>G
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000372326
  ensembl transcript: ENST00000382873
  gene symbol: FECH
  hgvsc: ENST00000382873.3:c.140C>G
  hgvsp: ENSP00000372326.3:p.Thr47Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000262093
  ensembl transcript: ENST00000262093
  gene symbol: FECH
  hgvsc: ENST00000262093.5:c.140C>G
  hgvsp: ENSP00000262093.5:p.Thr47Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465243
  ensembl transcript: ENST00000585494
  gene symbol: FECH
  hgvsc: ENST00000585494.1:c.140C>G
  hgvsp: ENSP00000465243.1:p.Thr47Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000465717
  ensembl transcript: ENST00000585747
  gene symbol: FECH
  hgvsc: ENST00000585747.1:c.140C>G
  hgvsp: ENSP00000465717.1:p.Thr47Arg
  variant of: http://identifiers.org/hgnc/3647
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066926
  ensembl protein: ENSP00000466263
  ensembl transcript: ENST00000592699
  gene symbol: FECH
  hgvsc: ENST00000592699.1:c.140C>G
  hgvsp: ENSP00000466263.1:p.Thr47Arg
  variant of: http://identifiers.org/hgnc/3647
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15126
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6307
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr47Arg
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 398
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4115
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1954
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.703693607741584e-5
allele num: 58696
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.811e0

VQSLOD
type: SiteQuality
SIO_000300: -1.597e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.13137e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

GenotypeQuality
all individuals: 766
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12089
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15642
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8449
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 457
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.203369434416366e-4
allele num: 8310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.963e0

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.545e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.067e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

QD
type: SiteQuality
SIO_000300: 5.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.267e0

DP
type: SiteQuality
SIO_000300: 1.06139e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 375
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14644
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6913
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.042100875364735e-4
allele num: 9596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7100
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

DP
type: SiteQuality
SIO_000300: 1.01605e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.752e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-1

FS
type: SiteQuality
SIO_000300: 3.522e0

GenotypeQuality
all individuals: 243
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2915
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.898253606681853e-5
allele num: 52680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14130
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.288e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.85387e5

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.946e-1

GenotypeQuality
all individuals: 1103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51063
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2058
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

DP
type: SiteQuality
SIO_000300: 3.491792e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 1.259e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-2

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51070
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2071
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.834e0

FS
type: SiteQuality
SIO_000300: 1.3652e1

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.27e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.443e0

DP
type: SiteQuality
SIO_000300: 3.493221e6

QD
type: SiteQuality
SIO_000300: 1.187e1

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51084
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994485073732166e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.493897e6

MQ
type: SiteQuality
SIO_000300: 5.919e1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.862e0

FS
type: SiteQuality
SIO_000300: 1.866e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.312e1

VQSLOD
type: SiteQuality
SIO_000300: 5.679999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

GenotypeQuality
all individuals: 2081
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51086
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495863805299125e-5
allele num: 66728
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

QD
type: SiteQuality
SIO_000300: 1.449e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.54e-1

FS
type: SiteQuality
SIO_000300: 2.094e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 3.494176e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e0

FS
type: SiteQuality
SIO_000300: 3.359e0

QD
type: SiteQuality
SIO_000300: 1.627e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

DP
type: SiteQuality
SIO_000300: 3.494316e6

VQSLOD
type: SiteQuality
SIO_000300: 2.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.777675063554426e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

DP
type: SiteQuality
SIO_000300: 3.49492e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.32e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

GenotypeQuality
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variant carriers: 55

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 402

GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 257

GenotypeQuality
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variant carriers: 163

GenotypeQuality
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variant carriers: 69

GenotypeQuality
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variant carriers: 15

GenotypeQuality
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variant carriers: 96

GenotypeQuality
all individuals: 59400
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variant carriers: 59389

GenotypeQuality
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variant carriers: 176

Other
type: Population
allele count: 906
allele frequency: 9.977973568281938e-1
allele num: 908
num of homozygotes: 452

African
type: Population
allele count: 9900
allele frequency: 9.513742071881607e-1
allele num: 10406
num of homozygotes: 4709

South Asian
type: Population
allele count: 16507
allele frequency: 9.998182919442762e-1
allele num: 16510
num of homozygotes: 8252

European (Non-Finnish)
type: Population
allele count: 66716
allele frequency: 9.996703527225869e-1
allele num: 66738
num of homozygotes: 33347

Latino
type: Population
allele count: 11512
allele frequency: 9.944713199723566e-1
allele num: 11576
num of homozygotes: 5727

East Asian
type: Population
allele count: 8654
allele frequency: 1.0e0
allele num: 8654
num of homozygotes: 4327

European (Finnish)
type: Population
allele count: 6614
allele frequency: 1.0e0
allele num: 6614
num of homozygotes: 3307

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

FS
type: SiteQuality
SIO_000300: 5.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 3.077e1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

DP
type: SiteQuality
SIO_000300: 4.555179e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.13e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 726
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.227e0

QD
type: SiteQuality
SIO_000300: 1.092e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 4.519e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

DP
type: SiteQuality
SIO_000300: 3.831597e6

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.092e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

FS
type: SiteQuality
SIO_000300: 4.519e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.227e0

DP
type: SiteQuality
SIO_000300: 3.831597e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.308e0

DP
type: SiteQuality
SIO_000300: 3.831503e6

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1632e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
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num of homozygotes: 0

Other
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allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -9.14e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.224e0

DP
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.314e1

DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

InbreedingCoeff
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SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.831513e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

FS
type: SiteQuality
SIO_000300: 2.391e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

QD
type: SiteQuality
SIO_000300: 1.314e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.831625e6

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 1.265e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.47e-2

BaseQRankSum
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QD
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SIO_000300: 1.198e1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.57e-1

VQSLOD
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SIO_000300: 3.91e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.214e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
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SIO_000300: 5.936e1

DP
type: SiteQuality
SIO_000300: 3.831617e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

FS
type: SiteQuality
SIO_000300: 1.3576e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 3.957e0

DP
type: SiteQuality
SIO_000300: 3.831798e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

QD
type: SiteQuality
SIO_000300: 3.228e1

VQSLOD
type: SiteQuality
SIO_000300: -3.626e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.831786e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

QD
type: SiteQuality
SIO_000300: 1.184e1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.71e-1

GenotypeQuality
all individuals: 1171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 93

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.311258278145695e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 89
allele frequency: 5.390672319806178e-3
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.834908e6

FS
type: SiteQuality
SIO_000300: 5.47e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.222e1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.519e0

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.974e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.151e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.997e0

DP
type: SiteQuality
SIO_000300: 3.830642e6

GenotypeQuality
all individuals: 5
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 10029
allele frequency: 1.502832139539066e-1
allele num: 66734
num of homozygotes: 766

African
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allele count: 587
allele frequency: 5.640976359792427e-2
allele num: 10406
num of homozygotes: 13

European (Finnish)
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allele count: 702
allele frequency: 1.062348668280872e-1
allele num: 6608
num of homozygotes: 27

South Asian
type: Population
allele count: 461
allele frequency: 2.792247122955784e-2
allele num: 16510
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Other
type: Population
allele count: 110
allele frequency: 1.214128035320088e-1
allele num: 906
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Latino
type: Population
allele count: 596
allele frequency: 5.148583275742916e-2
allele num: 11576
num of homozygotes: 21

East Asian
type: Population
allele count: 8
allele frequency: 9.244280101687081e-4
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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QD
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
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South Asian
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East Asian
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Other
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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FS
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MQ
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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African
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MQ
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DP
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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ReadPosRankSum
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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BaseQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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African
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Other
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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DP
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FS
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ClippingRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

VQSLOD
type: SiteQuality
SIO_000300: -2.005e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 8.49e0

DP
type: SiteQuality
SIO_000300: 3.714672e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.988e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.171e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

QD
type: SiteQuality
SIO_000300: 1.102e1

MQRankSum
type: SiteQuality
SIO_000300: 1.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.714632e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.414e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 3.713673e6

MQ
type: SiteQuality
SIO_000300: 5.892e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

FS
type: SiteQuality
SIO_000300: 1.907e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.04e-2

QD
type: SiteQuality
SIO_000300: 1.253e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.604e0

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.076e1

DP
type: SiteQuality
SIO_000300: 3.713008e6

GenotypeQuality
all individuals: 1417
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 777
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GenotypeQuality
all individuals: 49596
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003995313767311e-5
allele num: 66578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-4
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.271e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

DP
type: SiteQuality
SIO_000300: 3.708959e6

QD
type: SiteQuality
SIO_000300: 1.35e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.75e-1

MQ
type: SiteQuality
SIO_000300: 5.866e1

GenotypeQuality
all individuals: 775
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 3.708793e6

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

QD
type: SiteQuality
SIO_000300: 1.213e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.05e-1

FS
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 25

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.70367700072098e-4
allele num: 66576
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.596053997923157e-4
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.903038513644281e-4
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.708793e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

FS
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.171e0

MQRankSum
type: SiteQuality
SIO_000300: -9.69e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 1.339e1

DP
type: SiteQuality
SIO_000300: 3.707247e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 1596
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GenotypeQuality
all individuals: 2325
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.83e0

QD
type: SiteQuality
SIO_000300: 1.604e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.013e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 9.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 3.703171e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 9.5e-2

GenotypeQuality
all individuals: 49589
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.723842862699339e-5
allele num: 10284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.159999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

QD
type: SiteQuality
SIO_000300: 1.291e1

DP
type: SiteQuality
SIO_000300: 3.702152e6

MQRankSum
type: SiteQuality
SIO_000300: -4.35e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.26e-1

GenotypeQuality
all individuals: 2256
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 479
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GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 47
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 1401
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variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66428
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.595e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 3.701013e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.87e0

QD
type: SiteQuality
SIO_000300: 1.417e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 2041
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 1220
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variant carriers: 0

GenotypeQuality
all individuals: 555
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variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 2009
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variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49598
bin: 9.75e1
variant carriers: 107

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515151515151515e-4
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 90
allele frequency: 8.818342151675485e-3
allele num: 10206
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.652244708071644e-4
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.805724197745013e-4
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506977304921788e-5
allele num: 66358
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.064e1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 3.78e-1

FS
type: SiteQuality
SIO_000300: 4.942e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

DP
type: SiteQuality
SIO_000300: 3.697739e6

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 1224
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 1394
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variant carriers: 0

GenotypeQuality
all individuals: 49556
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variant carriers: 5

GenotypeQuality
all individuals: 2009
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variant carriers: 0

GenotypeQuality
all individuals: 2049
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.907734589713388e-4
allele num: 10188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

QD
type: SiteQuality
SIO_000300: 9.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e-1

FS
type: SiteQuality
SIO_000300: 1.0428e1

DP
type: SiteQuality
SIO_000300: 3.695168e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.374e0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
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variant carriers: 0

GenotypeQuality
all individuals: 1078
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 750
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GenotypeQuality
all individuals: 2047
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GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49550
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515151515151515e-4
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.227e0

FS
type: SiteQuality
SIO_000300: 1.024e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.92e0

DP
type: SiteQuality
SIO_000300: 3.691699e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.217e1

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49548
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1376
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.533e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

QD
type: SiteQuality
SIO_000300: 9.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.083e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 3.689435e6

MQ
type: SiteQuality
SIO_000300: 5.915e1

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49547
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2043
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1581
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511532996765319e-5
allele num: 66158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10014
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.684602e6

MQ
type: SiteQuality
SIO_000300: 5.866e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.709e0

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

QD
type: SiteQuality
SIO_000300: 1.056e1

FS
type: SiteQuality
SIO_000300: 6.663e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.806e0

GenotypeQuality
all individuals: 341
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49543
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66118
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.736714136853074e-4
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.46e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.59e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

FS
type: SiteQuality
SIO_000300: 3.277e0

DP
type: SiteQuality
SIO_000300: 3.682882e6

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2389
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19087
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5918
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23717
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2761
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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African
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Other
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East Asian
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European (Finnish)
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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QD
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VQSLOD
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ReadPosRankSum
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

African
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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QD
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DP
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VQSLOD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498351813005694e-5
allele num: 66740
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Latino
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African
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European (Finnish)
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BaseQRankSum
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16512
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 21
allele frequency: 3.146538807311957e-4
allele num: 66740
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Other
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allele frequency: 3.303964757709251e-3
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European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 3.973052340646053e-3
allele num: 11578
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African
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allele count: 838
allele frequency: 8.053046319431098e-2
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QD
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MQ
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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SIO_000300: 5.42e-2

VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11578
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Other
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East Asian
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South Asian
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European (Non-Finnish)
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allele num: 66740
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African
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European (Finnish)
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQ
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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African
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East Asian
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South Asian
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Other
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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FS
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BaseQRankSum
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ClippingRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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ReadPosRankSum
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ClippingRankSum
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MQ
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DP
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QD
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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Other
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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South Asian
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European (Finnish)
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Other
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East Asian
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QD
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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DP
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InbreedingCoeff
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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DP
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MQ
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Other
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African
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East Asian
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Latino
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BaseQRankSum
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InbreedingCoeff
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QD
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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South Asian
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African
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East Asian
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European (Non-Finnish)
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VQSLOD
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FS
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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Other
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European (Finnish)
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African
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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African
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South Asian
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European (Non-Finnish)
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MQ
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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FS
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VQSLOD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23341
bin: 9.75e1
variant carriers: 2639

GenotypeQuality
all individuals: 1386
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 171
allele frequency: 1.643282721506823e-2
allele num: 10406
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 1186
allele frequency: 1.777045250224753e-2
allele num: 66740
num of homozygotes: 5

East Asian
type: Population
allele count: 140
allele frequency: 1.617749017795239e-2
allele num: 8654
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 118
allele frequency: 1.784094345328092e-2
allele num: 6614
num of homozygotes: 3

Latino
type: Population
allele count: 280
allele frequency: 2.418797512093988e-2
allele num: 11576
num of homozygotes: 4

Other
type: Population
allele count: 14
allele frequency: 1.541850220264317e-2
allele num: 908
num of homozygotes: 1

South Asian
type: Population
allele count: 784
allele frequency: 4.748062015503876e-2
allele num: 16512
num of homozygotes: 37

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.16e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

QD
type: SiteQuality
SIO_000300: 1.279e1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

DP
type: SiteQuality
SIO_000300: 2.977114e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.578e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23341
bin: 9.75e1
variant carriers: 98

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 9
allele frequency: 7.774706288873532e-4
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 86
allele frequency: 8.264462809917356e-3
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.16e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 2.977114e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

QD
type: SiteQuality
SIO_000300: 1.279e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.578e0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21429
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20462
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6303
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2911
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 2.698207e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.425e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

QD
type: SiteQuality
SIO_000300: 1.414e1

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0