X-69668731-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668731
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668731
    reference: chr 0
allele count: 1
allele frequency: 1.486171177196189e-5
allele num: 67287
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.358-32G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.412-32G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.424-32G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

X-69668743-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668743
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668743
    reference: chr 0
allele count: 1
allele frequency: 1.463807362951036e-5
allele num: 68315
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.424-20C>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.358-20C>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.412-20C>G
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 436
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

X-69668749-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668749
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668749
    reference: chr 0
allele count: 4
allele frequency: 5.793826677674937e-5
allele num: 69039
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.358-14G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.424-14G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.412-14G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

X-69668757-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668757
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668757
    reference: chr 0
allele count: 1
allele frequency: 1.428204176069011e-5
allele num: 70018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.412-6C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.424-6C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.358-6C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.358-6C>T
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

X-69668759-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668759
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668759
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 70245
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.412-4C>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.424-4C>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.358-4C>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3883
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 9.25e1
  variant carriers: 0
hgvs: c.358-4C>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ

X-69668760-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668760
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668760
    reference: chr 0
allele count: 7
allele frequency: 9.942616896767228e-5
allele num: 70404
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.358-3T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.424-3T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.412-3T>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13419
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 676
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  variant carriers: 1
hgvs: c.358-3T>C
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

X-69668768-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668768
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668768
    reference: chr 0
allele count: 1
allele frequency: 1.408609420779806e-5
allele num: 70992
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.417T>C
  hgvsp: ENST00000194900.4:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.429T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.363T>C
  hgvsp: ENST00000374360.3:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Asn121Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

X-69668773-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668773
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668773
    reference: chr 0
allele count: 2
allele frequency: 2.798846875087464e-5
allele num: 71458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.434G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.422G>A
  hgvsp: ENSP00000194900.4:p.Ser141Asn
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.368G>A
  hgvsp: ENSP00000363480.3:p.Ser123Asn
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser123Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-69668783-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668783
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668783
    reference: chr 0
allele count: 2
allele frequency: 2.785903329154478e-5
allele num: 71790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.444G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.432G>A
  hgvsp: ENSP00000194900.4:p.Met144Ile
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.378G>A
  hgvsp: ENSP00000363480.3:p.Met126Ile
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met126Ile
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

X-69668795-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668795
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668795
    reference: chr 0
allele count: 2
allele frequency: 2.792009269470774e-5
allele num: 71633
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.456G>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.444G>T
  hgvsp: ENSP00000194900.4:p.Glu148Asp
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.390G>T
  hgvsp: ENSP00000363480.3:p.Glu130Asp
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu130Asp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

X-69668801-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668801
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668801
    reference: chr 0
allele count: 2
allele frequency: 2.804773724879745e-5
allele num: 71307
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.396C>T
  hgvsp: ENST00000374360.3:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.450C>T
  hgvsp: ENST00000194900.4:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.462C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ile132Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

X-69668802-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668802
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668802
    reference: chr 0
allele count: 7
allele frequency: 9.833256072035625e-5
allele num: 71187
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.451G>A
  hgvsp: ENSP00000194900.4:p.Val151Ile
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.397G>A
  hgvsp: ENSP00000363480.3:p.Val133Ile
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.463G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Val133Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

X-69668821-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668821
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668821
    reference: chr 0
allele count: 2
allele frequency: 2.861475949294646e-5
allele num: 69894
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.408+8T>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.474+8T>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.462+8T>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
hgvs: c.408+8T>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-69668821-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668821
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668821
    reference: chr 0
allele count: 1
allele frequency: 1.430737974647323e-5
allele num: 69894
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.408+8T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.462+8T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.474+8T>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: c.408+8T>C
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

X-69668821-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668821
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668821
    reference: chr 0
allele count: 1
allele frequency: 1.430737974647323e-5
allele num: 69894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.462+8T>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.408+8T>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.474+8T>G
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.408+8T>G
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

X-69668838-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668838
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668838
    reference: chr 0
allele count: 13
allele frequency: 1.924585843930893e-4
allele num: 67547
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.462+25G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.474+25G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.408+25G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11800
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

X-69668844-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668844
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668844
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 66820
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.408+31G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.462+31G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.474+31G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12869
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6132
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

X-69668853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668853
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668853
    reference: chr 0
allele count: 8
allele frequency: 1.237011380504701e-4
allele num: 64672
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.408+40G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.474+40G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.462+40G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 4171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

X-69668854-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668854
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668854
    reference: chr 0
allele count: 8
allele frequency: 1.242409653523008e-4
allele num: 64391
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.462+41G>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.408+41G>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.474+41G>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 6574
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

X-69668855-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069668855
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069668855
    reference: chr 0
allele count: 1
allele frequency: 1.568184669426672e-5
allele num: 63768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.474+42G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.462+42G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.408+42G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

X-69669172-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669172
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669172
    reference: chr 0
allele count: 1
allele frequency: 1.143994600345486e-5
allele num: 87413
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.463-37G>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.475-37G>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.409-37G>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

X-69669205-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669205
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669205
    reference: chr 0
allele count: 88
allele frequency: 1.005071040248527e-3
allele num: 87556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.463-4G>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.409-4G>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.475-4G>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3508
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  variant carriers: 2
hgvs: c.409-4G>T
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

X-69669224-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669224
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669224
    reference: chr 0
allele count: 1
allele frequency: 1.141109614989616e-5
allele num: 87634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.478G>A
  hgvsp: ENSP00000194900.4:p.Gly160Ser
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.424G>A
  hgvsp: ENSP00000363480.3:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.490G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gly142Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

X-69669229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669229
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669229
    reference: chr 0
allele count: 128
allele frequency: 1.460620307186708e-3
allele num: 87634
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.495C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.483C>T
  hgvsp: ENST00000194900.4:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.429C>T
  hgvsp: ENST00000374360.3:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Phe143Phe
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

X-69669235-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669235
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669235
    reference: chr 0
allele count: 14
allele frequency: 1.597371183423851e-4
allele num: 87644
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.501C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.435C>T
  hgvsp: ENST00000374360.3:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.489C>T
  hgvsp: ENST00000194900.4:c.489C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile145Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

X-69669245-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669245
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669245
    reference: chr 0
allele count: 1
allele frequency: 1.14100545400607e-5
allele num: 87642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.499A>G
  hgvsp: ENSP00000194900.4:p.Ile167Val
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.511A>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.445A>G
  hgvsp: ENSP00000363480.3:p.Ile149Val
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 204
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 252
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile149Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

X-69669247-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669247
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669247
    reference: chr 0
allele count: 3
allele frequency: 3.423211657176763e-5
allele num: 87637
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.447C>T
  hgvsp: ENST00000374360.3:c.447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.501C>T
  hgvsp: ENST00000194900.4:c.501C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.513C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 145
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  variant carriers: 0
hgvs: p.Ile149Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

X-69669259-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669259
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669259
    reference: chr 0
allele count: 1
allele frequency: 1.141239842965398e-5
allele num: 87624
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.459T>C
  hgvsp: ENST00000374360.3:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.513T>C
  hgvsp: ENST00000194900.4:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.525T>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.His153His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

X-69669260-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669260
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669260
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 87620
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.526G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.460G>A
  hgvsp: ENSP00000363480.3:p.Val154Ile
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.514G>A
  hgvsp: ENSP00000194900.4:p.Val172Ile
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17206
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val154Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

X-69669262-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669262
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669262
    reference: chr 0
allele count: 7
allele frequency: 7.990137886950964e-5
allele num: 87608
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.462C>T
  hgvsp: ENST00000374360.3:c.462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.516C>T
  hgvsp: ENST00000194900.4:c.516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.528C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val154Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-69669263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669263
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669263
    reference: chr 0
allele count: 2
allele frequency: 2.282844424152494e-5
allele num: 87610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.529C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.517C>T
  hgvsp: ENSP00000194900.4:p.Pro173Ser
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.463C>T
  hgvsp: ENSP00000363480.3:p.Pro155Ser
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 187
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  variant carriers: 0
hgvs: p.Pro155Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-69669265-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669265
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669265
    reference: chr 0
allele count: 2
allele frequency: 2.283052898335654e-5
allele num: 87602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.519T>G
  hgvsp: ENST00000194900.4:c.519T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.465T>G
  hgvsp: ENST00000374360.3:c.465T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.531T>G
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro155Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

X-69669318-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669318
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669318
    reference: chr 0
allele count: 1
allele frequency: 1.145055649704576e-5
allele num: 87332
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.572T>C
  hgvsp: ENSP00000194900.4:p.Met191Thr
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.518T>C
  hgvsp: ENSP00000363480.3:p.Met173Thr
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.584T>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Met173Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

X-69669327-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669327
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669327
    reference: chr 0
allele count: 1
allele frequency: 1.146526026140793e-5
allele num: 87220
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.527G>A
  hgvsp: ENSP00000363480.3:p.Arg176Lys
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.593G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.581G>A
  hgvsp: ENSP00000194900.4:p.Arg194Lys
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg176Lys
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

X-69669336-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669336
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669336
    reference: chr 0
allele count: 1
allele frequency: 1.148342941135941e-5
allele num: 87082
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+3G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+3G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+3G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.533+3G>A
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

X-69669339-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669339
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669339
    reference: chr 0
allele count: 11
allele frequency: 1.263641585295807e-4
allele num: 87050
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+6A>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+6A>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+6A>G
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.533+6A>G
num of homozygotes: 1
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
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site quality: DP
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site quality: QD
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site quality: MQ

X-69669343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669343
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669343
    reference: chr 0
allele count: 1
allele frequency: 1.150430260917583e-5
allele num: 86924
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+10C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+10C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+10C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14915
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
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X-69669346-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669346
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669346
    reference: chr 0
allele count: 2
allele frequency: 2.300886991935391e-5
allele num: 86923
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+13G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+13G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+13G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

X-69669362-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669362
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669362
    reference: chr 0
allele count: 2
allele frequency: 2.307124400147656e-5
allele num: 86688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+29G>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+29G>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+29G>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 2269
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2610
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17145
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

X-69669368-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669368
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669368
    reference: chr 0
allele count: 1
allele frequency: 1.156243134806387e-5
allele num: 86487
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+35G>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+35G>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+35G>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

X-69669369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669369
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669369
    reference: chr 0
allele count: 1
allele frequency: 1.15720650350055e-5
allele num: 86415
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+36G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+36G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+36G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4991
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

X-69669373-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669373
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669373
    reference: chr 0
allele count: 9
allele frequency: 1.043308912176574e-4
allele num: 86264
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+40A>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+40A>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+40A>G
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6598
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7054
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
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site quality: ReadPosRankSum
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X-69669378-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669378
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669378
    reference: chr 0
allele count: 4
allele frequency: 4.658638280030747e-5
allele num: 85862
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+45C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+45C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+45C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
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site quality: MQ
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X-69669379-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669379
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669379
    reference: chr 0
allele count: 1
allele frequency: 1.166929225742459e-5
allele num: 85695
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+46G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+46G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+46G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

X-69669382-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669382
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669382
    reference: chr 0
allele count: 6
allele frequency: 6.991866129069849e-5
allele num: 85814
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.599+49A>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.587+49A>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.533+49A>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
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site quality: DP

X-69669489-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669489
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669489
    reference: chr 0
allele count: 1
allele frequency: 1.439428834638416e-5
allele num: 69472
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.534-51G>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.600-51G>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.588-51G>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
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site quality: FS
site quality: MQ
site quality: InbreedingCoeff
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X-69669492-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669492
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669492
    reference: chr 0
allele count: 1
allele frequency: 1.423264684533383e-5
allele num: 70261
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.588-48G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.534-48G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
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  ensembl gene: ENSG00000082458
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  gene symbol: DLG3
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  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
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X-69669507-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669507
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669507
    reference: chr 0
allele count: 1
allele frequency: 1.400501379493859e-5
allele num: 71403
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.588-33C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.534-33C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000082458
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  gene symbol: DLG3
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  variant of: http://identifiers.org/hgnc/2902
canonical: true
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num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
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population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
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site quality: FS
site quality: QD
site quality: ReadPosRankSum
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X-69669510-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669510
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669510
    reference: chr 0
allele count: 1
allele frequency: 1.392311655040864e-5
allele num: 71823
alternate allele: C
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.534-30A>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.600-30A>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
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  variant of: http://identifiers.org/hgnc/2902
canonical: true
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
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population: South Asian
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X-69669524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669524
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669524
    reference: chr 0
allele count: 1
allele frequency: 1.360988622135119e-5
allele num: 73476
alternate allele: T
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.588-16C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.600-16C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
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  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.534-16C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 1774
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

X-69669541-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669541
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669541
    reference: chr 0
allele count: 1
allele frequency: 1.311888332065175e-5
allele num: 76226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.589G>T
  hgvsp: ENSP00000194900.4:p.Val197Leu
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.601G>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.535G>T
  hgvsp: ENSP00000363480.3:p.Val179Leu
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val179Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

X-69669558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669558
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669558
    reference: chr 0
allele count: 1
allele frequency: 1.292206701383953e-5
allele num: 77387
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.552G>A
  hgvsp: ENST00000374360.3:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.606G>A
  hgvsp: ENST00000194900.4:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.618G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Leu184Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

X-69669579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669579
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669579
    reference: chr 0
allele count: 4
allele frequency: 5.215395848544904e-5
allele num: 76696
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.573G>A
  hgvsp: ENST00000374360.3:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.639G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.627G>A
  hgvsp: ENST00000194900.4:c.627G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Val191Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-69669579-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669579
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669579
    reference: chr 0
allele count: 4
allele frequency: 5.215395848544904e-5
allele num: 76696
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.573G>T
  hgvsp: ENST00000374360.3:c.573G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.639G>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.627G>T
  hgvsp: ENST00000194900.4:c.627G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val191Val
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-69669581-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669581
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669581
    reference: chr 0
allele count: 1
allele frequency: 1.304087008685219e-5
allele num: 76682
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.575C>T
  hgvsp: ENSP00000363480.3:p.Ser192Leu
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.629C>T
  hgvsp: ENSP00000194900.4:p.Ser210Leu
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.641C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser192Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

X-69669582-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669582
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669582
    reference: chr 0
allele count: 8
allele frequency: 1.043487334672475e-4
allele num: 76666
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.576G>A
  hgvsp: ENST00000374360.3:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.642G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.630G>A
  hgvsp: ENST00000194900.4:c.630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser192Ser
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

X-69669585-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669585
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669585
    reference: chr 0
allele count: 1
allele frequency: 1.308660716622608e-5
allele num: 76414
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.579G>A
  hgvsp: ENST00000374360.3:c.579G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.633G>A
  hgvsp: ENST00000194900.4:c.633G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.645G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu193Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

X-69669599-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669599
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669599
    reference: chr 0
allele count: 1
allele frequency: 1.368325989983854e-5
allele num: 73082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.659G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.593G>A
  hgvsp: ENSP00000363480.3:p.Arg198Gln
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.647G>A
  hgvsp: ENSP00000194900.4:p.Arg216Gln
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg198Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

X-69669603-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669603
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669603
    reference: chr 0
allele count: 18
allele frequency: 2.486909186366211e-4
allele num: 72379
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.651G>A
  hgvsp: ENST00000194900.4:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.663G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.597G>A
  hgvsp: ENST00000374360.3:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 543
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13559
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18238
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 203
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 62
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala199Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

X-69669609-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669609
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669609
    reference: chr 0
allele count: 1
allele frequency: 1.416069557336656e-5
allele num: 70618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.657G>A
  hgvsp: ENST00000194900.4:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.669G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.603G>A
  hgvsp: ENST00000374360.3:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16205
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3616
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25965
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu201Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

X-69669612-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669612
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669612
    reference: chr 0
allele count: 1
allele frequency: 1.446047950950054e-5
allele num: 69154
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.606G>A
  hgvsp: ENST00000374360.3:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.672G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.660G>A
  hgvsp: ENST00000194900.4:c.660G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 391
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genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala202Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

X-69669639-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669639
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669639
    reference: chr 0
allele count: 2
allele frequency: 3.461345424966685e-5
allele num: 57781
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.633A>G
  hgvsp: ENST00000374360.3:c.633A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.699A>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.687A>G
  hgvsp: ENST00000194900.4:c.687A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12435
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 24999
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg211Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

X-69669640-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669640
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669640
    reference: chr 0
allele count: 1
allele frequency: 1.753278631040045e-5
allele num: 57036
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.634T>C
  hgvsp: ENST00000374360.3:c.634T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.700T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.688T>C
  hgvsp: ENST00000194900.4:c.688T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu212Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

X-69669666-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669666
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669666
    reference: chr 0
allele count: 1
allele frequency: 2.534854245880862e-5
allele num: 39450
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.714A>C
  hgvsp: ENST00000194900.4:c.714A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.660A>C
  hgvsp: ENST00000374360.3:c.660A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.726A>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Pro220Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

X-69669668-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669668
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669668
    reference: chr 0
allele count: 1
allele frequency: 2.562985365353564e-5
allele num: 39017
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.662C>A
  hgvsp: ENSP00000363480.3:p.Pro221His
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.716C>A
  hgvsp: ENSP00000194900.4:p.Pro239His
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.728C>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 706
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro221His
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

X-69669668-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669668
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669668
    reference: chr 0
allele count: 11
allele frequency: 2.81928390188892e-4
allele num: 39017
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.716C>T
  hgvsp: ENSP00000194900.4:p.Pro239Leu
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.728C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.662C>T
  hgvsp: ENSP00000363480.3:p.Pro221Leu
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 396
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro221Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

X-69669705-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669705
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669705
    reference: chr 0
allele count: 2
allele frequency: 8.630734043930436e-5
allele num: 23173
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.765C>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.753C>G
  hgvsp: ENST00000194900.4:c.753C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.699C>G
  hgvsp: ENST00000374360.3:c.699C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 506
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro233Pro
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

X-69669730-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669730
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669730
    reference: chr 0
allele count: 1
allele frequency: 5.72508158241255e-5
allele num: 17467
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.769+21G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.703+21G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.757+21G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

X-69669745-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669745
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669745
    reference: chr 0
allele count: 1
allele frequency: 6.26017278076875e-5
allele num: 15974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.757+36C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.769+36C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.703+36C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

X-69669747-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669747
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669747
    reference: chr 0
allele count: 1
allele frequency: 6.29643621710112e-5
allele num: 15882
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.757+38T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.769+38T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.703+38T>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-69669982-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669982
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669982
    reference: chr 0
allele count: 4
allele frequency: 5.176921284911863e-5
allele num: 77266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.758-37T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.704-37T>C
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.770-37T>C
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12169
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
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site quality: DP
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site quality: VQSLOD

X-69669989-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669989
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669989
    reference: chr 0
allele count: 1
allele frequency: 1.294213571123507e-5
allele num: 77267
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.770-30C>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.758-30C>G
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.704-30C>G
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
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site quality: DP
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X-69669991-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669991
    reference: chr 0
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    type: ExactPosition
    position: 24069669991
    reference: chr 0
allele count: 5
allele frequency: 6.46847266423452e-5
allele num: 77298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.770-28C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.758-28C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
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  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.704-28C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
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site quality: InbreedingCoeff
site quality: FS
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X-69669995-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069669995
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069669995
    reference: chr 0
allele count: 2
allele frequency: 2.585449092507368e-5
allele num: 77356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.758-24C>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.770-24C>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.704-24C>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
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X-69670012-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069670012
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069670012
    reference: chr 0
allele count: 2
allele frequency: 2.591680704937152e-5
allele num: 77170
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
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  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.704-7C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.770-7C>T
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
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  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.758-7C>T
  variant of: http://identifiers.org/hgnc/2902
canonical: true
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genotype depth: GenotypeDepth
  all individuals: 40
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13884
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31466
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
hgvs: c.704-7C>T
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

X-69670013-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24069670013
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24069670013
    reference: chr 0
allele count: 2
allele frequency: 2.596391016487083e-5
allele num: 77030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000194900
  ensembl transcript: ENST00000194900
  gene symbol: DLG3
  hgvsc: ENST00000194900.4:c.758-6G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl protein: ENSP00000363480
  ensembl transcript: ENST00000374360
  gene symbol: DLG3
  hgvsc: ENST00000374360.3:c.704-6G>A
  variant of: http://identifiers.org/hgnc/2902
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082458
  ensembl transcript: ENST00000463252
  gene symbol: DLG3
  hgvsc: ENST00000463252.1:n.770-6G>A
  variant of: http://identifiers.org/hgnc/2902
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9633
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22131
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3694
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12664
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 7.5e0
  variant carriers: 0
hgvs: c.704-6G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

GenotypeQuality
all individuals: 1188
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.371553970648745e-4
allele num: 7291
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3084
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5197
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6233
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.703e0

QD
type: SiteQuality
SIO_000300: 1.318e1

DP
type: SiteQuality
SIO_000300: 1.4003e6

VQSLOD
type: SiteQuality
SIO_000300: 4.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 1.073e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.255e0

GenotypeQuality
all individuals: 2613
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.604302307411844e-5
allele num: 38398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7341
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3141
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7263
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.601e0

DP
type: SiteQuality
SIO_000300: 1.445325e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

FS
type: SiteQuality
SIO_000300: 3.589e0

QD
type: SiteQuality
SIO_000300: 2.05e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.44e-1

GenotypeQuality
all individuals: 395
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38798
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.420788724759452e-4
allele num: 7379
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3171
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 457
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6609
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7287
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.453e0

VQSLOD
type: SiteQuality
SIO_000300: 3.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.4e-2

FS
type: SiteQuality
SIO_000300: 4.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

DP
type: SiteQuality
SIO_000300: 1.468438e6

QD
type: SiteQuality
SIO_000300: 1.348e1

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 619
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 467
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7439
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.544011397171059e-5
allele num: 39308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7354
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: 3.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

FS
type: SiteQuality
SIO_000300: 6.117e0

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

DP
type: SiteQuality
SIO_000300: 1.4938e6

GenotypeQuality
all individuals: 7138
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3225
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 467
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5443
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7446
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: -2.875e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.499611e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 1.638e0

MQ
type: SiteQuality
SIO_000300: 5.82e1

GenotypeQuality
all individuals: 620
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 469
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7452
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 9.497964721845319e-4
allele num: 7370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6879
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.462e1

FS
type: SiteQuality
SIO_000300: 3.117e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.477e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 1.502422e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
all individuals: 1243
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 469
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.334935255640101e-4
allele num: 7491
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7392
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3265
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6995
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.212e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.209e0

MQRankSum
type: SiteQuality
SIO_000300: -1.513e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.79e-1

DP
type: SiteQuality
SIO_000300: 1.515571e6

GenotypeQuality
all individuals: 618
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3293
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7079
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 2.687449610319806e-4
allele num: 7442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.855e1

VQSLOD
type: SiteQuality
SIO_000300: -1.227e0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.247e0

DP
type: SiteQuality
SIO_000300: 1.52473e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.538e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

GenotypeQuality
all individuals: 1236
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7463
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7523
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3320
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7133
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 473
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.963271788763152e-5
allele num: 40296
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.312e0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.699e1

DP
type: SiteQuality
SIO_000300: 1.532087e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 2
allele frequency: 3.613369467028004e-4
allele num: 5535
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 469
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40239
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3322
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7459
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.863e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 2.878e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

QD
type: SiteQuality
SIO_000300: 1.05e1

DP
type: SiteQuality
SIO_000300: 1.52336e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.99488024774606e-5
allele num: 40041
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7449
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7038
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 466
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3305
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7502
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.91e-1

QD
type: SiteQuality
SIO_000300: 1.547e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.512432e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 5.001250312578144e-5
allele num: 39990
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.819505094614265e-4
allele num: 5496
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7013
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African
type: Population
allele count: 4
allele frequency: 5.337603416066186e-4
allele num: 7494
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 467
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.507526e6

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.11e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.817e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 1
allele frequency: 3.091190108191654e-4
allele num: 3235
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7362
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.54569522936714e-5
allele num: 39282
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 7414
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5389
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MQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.95e-2

QD
type: SiteQuality
SIO_000300: 2.001e1

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

FS
type: SiteQuality
SIO_000300: 3.796e0

DP
type: SiteQuality
SIO_000300: 1.453167e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5389
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3235
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.54569522936714e-5
allele num: 39282
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6742
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.896e1

BaseQRankSum
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.001e1

VQSLOD
type: SiteQuality
SIO_000300: -1.931e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.95e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5389
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.091190108191654e-4
allele num: 3235
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 470
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7414
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6742
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 39282
num of homozygotes: 0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.001e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.95e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.931e0

DP
type: SiteQuality
SIO_000300: 1.453167e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
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South Asian
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allele count: 6
allele frequency: 8.289582757667864e-4
allele num: 7238
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 1.052880945487089e-4
allele num: 37991
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6299
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.927153594141453e-4
allele num: 5189
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African
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allele count: 2
allele frequency: 2.76243093922652e-4
allele num: 7240
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.360363e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 1.687e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5134
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7201
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3097
num of homozygotes: 0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-2

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.128827430506561e-3
allele num: 7087
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Latino
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allele frequency: 0.0e0
allele num: 5672
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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VQSLOD
type: SiteQuality
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FS
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 36294
num of homozygotes: 0

South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.13555713271824e-3
allele num: 7045
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Other
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Latino
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 2947
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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Latino
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East Asian
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South Asian
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allele num: 7053
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VQSLOD
type: SiteQuality
SIO_000300: -1.226e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.288375e6

GenotypeQuality
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variant carriers: 1

South Asian
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European (Non-Finnish)
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allele frequency: 2.088685590158114e-5
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African
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East Asian
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European (Finnish)
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Latino
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Other
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQ
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QD
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MQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 77

Other
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South Asian
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European (Non-Finnish)
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allele frequency: 1.126408010012516e-3
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European (Finnish)
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African
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allele frequency: 3.529827038475115e-4
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East Asian
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Latino
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allele frequency: 3.223726627981947e-3
allele num: 9306
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
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MQ
type: SiteQuality
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
type: SiteQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

South Asian
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allele frequency: 9.919650828290844e-5
allele num: 10081
num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.68e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.873e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.599e0

DP
type: SiteQuality
SIO_000300: 2.22637e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 4.295071405562117e-4
allele num: 9313
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European (Finnish)
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allele count: 10
allele frequency: 2.224199288256228e-3
allele num: 4496
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.349900129244507e-4
allele num: 8511
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European (Non-Finnish)
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allele count: 112
allele frequency: 2.334889926617745e-3
allele num: 47968
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.281e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.685e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.048e-1

DP
type: SiteQuality
SIO_000300: 2.230947e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.032e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 14
allele frequency: 2.918308215037625e-4
allele num: 47973
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6637
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4495
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9311
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South Asian
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allele count: 0
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Other
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MQ
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.968e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.525e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.909820632246556e-5
allele num: 10091
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4493
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8509
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47976
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9306
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Other
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allele frequency: 0.0e0
allele num: 630
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VQSLOD
type: SiteQuality
SIO_000300: -1.751e0

MQ
type: SiteQuality
SIO_000300: 5.824e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e0

DP
type: SiteQuality
SIO_000300: 2.225197e6

QD
type: SiteQuality
SIO_000300: 1.248e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10089
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8509
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European (Non-Finnish)
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allele count: 3
allele frequency: 6.253256904637833e-5
allele num: 47975
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4492
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 630
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QD
type: SiteQuality
SIO_000300: 1.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.096e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.281e-1

DP
type: SiteQuality
SIO_000300: 2.225402e6

MQRankSum
type: SiteQuality
SIO_000300: 8.43e-1

FS
type: SiteQuality
SIO_000300: 4.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.24e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4490
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506704836522525e-4
allele num: 6637
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47971
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10083
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-1

DP
type: SiteQuality
SIO_000300: 2.223757e6

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.446e0

VQSLOD
type: SiteQuality
SIO_000300: 8.94e-1

FS
type: SiteQuality
SIO_000300: 1.919e0

QD
type: SiteQuality
SIO_000300: 1.261e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47967
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.223949e6

FS
type: SiteQuality
SIO_000300: 1.424e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.832e0

QD
type: SiteQuality
SIO_000300: 2.71e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.47e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4487
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.459367051661594e-4
allele num: 47966
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.817e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.22363e6

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.354e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.26e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.014318010550113e-4
allele num: 6635
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4487
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47967
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.85e-1

FS
type: SiteQuality
SIO_000300: 1.089e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -6.021e-1

DP
type: SiteQuality
SIO_000300: 2.223335e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.63e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.169707078077765e-5
allele num: 47965
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 629
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10071
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4488
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.223542e6

MQRankSum
type: SiteQuality
SIO_000300: -2.75e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.33e-2

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -6.8e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.088031403992316e-5
allele num: 47892
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9959
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4436
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.206729e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.91e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.922e1

FS
type: SiteQuality
SIO_000300: 7.205e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.64e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4430
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.089427496865859e-5
allele num: 47860
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.011e0

MQRankSum
type: SiteQuality
SIO_000300: -1.983e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.876e1

DP
type: SiteQuality
SIO_000300: 2.19771e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.091350175673415e-5
allele num: 47816
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4418
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.854e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.18387e6

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47812
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9282
num of homozygotes: 0

South Asian
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allele count: 11
allele frequency: 1.122563526890499e-3
allele num: 9799
num of homozygotes: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4419
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.178035e6

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -5.02e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9717
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.092619331617386e-5
allele num: 47787
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.76e-1

FS
type: SiteQuality
SIO_000300: 9.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.102e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.352e0

DP
type: SiteQuality
SIO_000300: 2.172333e6

MQ
type: SiteQuality
SIO_000300: 5.918e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9280
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.358212474943992e-4
allele num: 8481
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4408
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47780
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6631
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.24e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.32e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

DP
type: SiteQuality
SIO_000300: 2.165031e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

QD
type: SiteQuality
SIO_000300: 1.357e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4389
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6625
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9596
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8469
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.191378334765388e-5
allele num: 47717
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.18e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.04e-2

DP
type: SiteQuality
SIO_000300: 2.126863e6

QD
type: SiteQuality
SIO_000300: 3.002e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47669
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.056747331712987e-4
allele num: 9463
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4387
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.501e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.887e-1

DP
type: SiteQuality
SIO_000300: 2.104722e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9262
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.098459730557771e-5
allele num: 47654
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6625
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9424
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.071e1

VQSLOD
type: SiteQuality
SIO_000300: -3.086e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 3.277e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.148e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 2.09339e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 1.890319463989414e-4
allele num: 47611
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4375
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.887e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.46e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.79e-1

DP
type: SiteQuality
SIO_000300: 2.081992e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

QD
type: SiteQuality
SIO_000300: 1.812e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47493
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.096852034660524e-4
allele num: 9117
num of homozygotes: 0

African
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allele count: 3
allele frequency: 3.556609365737996e-4
allele num: 8435
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 2.064831e6

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

FS
type: SiteQuality
SIO_000300: 5.665e0

QD
type: SiteQuality
SIO_000300: 1.211e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.42e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4336
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.107792508905423e-5
allele num: 47443
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9020
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.916e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.278e0

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

QD
type: SiteQuality
SIO_000300: 1.045e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.055351e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4349
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9074
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6619
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 1.26350369574831e-4
allele num: 47487
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9237
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

QD
type: SiteQuality
SIO_000300: 1.771e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.29e-1

DP
type: SiteQuality
SIO_000300: 2.053479e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2814
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 469
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.577784651870183e-5
allele num: 38793
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7043
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e-1

QD
type: SiteQuality
SIO_000300: 8.789999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

FS
type: SiteQuality
SIO_000300: 2.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.548484925711665e-5
allele num: 39239
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.063878e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

QD
type: SiteQuality
SIO_000300: 2.727e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 7523
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7617
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2790
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 481
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 5630
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.505763255487622e-5
allele num: 39908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.268e0

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.397e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

DP
type: SiteQuality
SIO_000300: 1.135074e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.769285208775655e-4
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 495
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40133
num of homozygotes: 0

South Asian
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.271e0

MQRankSum
type: SiteQuality
SIO_000300: 6.79e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 7673
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.288825879623663e-4
allele num: 7759
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 41107
num of homozygotes: 0

South Asian
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.037e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.614e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.309e0

ClippingRankSum
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SIO_000300: 1.59e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 7815
num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele frequency: 2.338634237605238e-5
allele num: 42760
num of homozygotes: 0

East Asian
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European (Finnish)
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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MQ
type: SiteQuality
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FS
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DP
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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East Asian
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African
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South Asian
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Other
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.93e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 9.298865538404315e-5
allele num: 43016
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East Asian
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South Asian
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Latino
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
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DP
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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FS
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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Latino
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allele num: 8192
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East Asian
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African
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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MQRankSum
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QD
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
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VQSLOD
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FS
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 2.324770428920144e-5
allele num: 43015
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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East Asian
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Latino
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South Asian
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.942e1

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 2.44140625e-4
allele num: 8192
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European (Non-Finnish)
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allele frequency: 1.395608485299591e-4
allele num: 42992
num of homozygotes: 0

FS
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BaseQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -6.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.13e-2

GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 6015
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European (Non-Finnish)
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allele frequency: 2.334158069184445e-5
allele num: 42842
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African
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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InbreedingCoeff
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VQSLOD
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QD
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DP
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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MQ
type: SiteQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
allele num: 2751
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African
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South Asian
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Latino
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European (Non-Finnish)
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allele frequency: 2.443971943202092e-5
allele num: 40917
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Other
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DP
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MQ
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MQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele num: 5707
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European (Finnish)
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allele frequency: 1.486988847583643e-3
allele num: 2690
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African
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.973749136484753e-4
allele num: 40532
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South Asian
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Latino
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allele frequency: 7.935458272715249e-4
allele num: 7561
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
type: SiteQuality
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FS
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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GenotypeQuality
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variant carriers: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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South Asian
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European (Non-Finnish)
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Other
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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European (Non-Finnish)
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African
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Latino
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Other
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East Asian
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South Asian
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DP
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Other
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East Asian
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Latino
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allele num: 5053
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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FS
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VQSLOD
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MQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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Latino
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African
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Other
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MQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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QD
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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East Asian
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Other
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European (Finnish)
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Latino
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InbreedingCoeff
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ClippingRankSum
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FS
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QD
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DP
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SIO_000300: 7.41546e5

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3146
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 21168
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 987
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4838
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.599744040953447e-4
allele num: 6251
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2349
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.35624e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.08e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

FS
type: SiteQuality
SIO_000300: 3.05e0

VQSLOD
type: SiteQuality
SIO_000300: -2.165e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

QD
type: SiteQuality
SIO_000300: 2.397e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3146
num of homozygotes: 0

South Asian
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allele count: 11
allele frequency: 1.759718445048792e-3
allele num: 6251
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2349
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 987
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 21168
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.35624e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

FS
type: SiteQuality
SIO_000300: 3.05e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3394
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5309
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 1.711010351612627e-4
allele num: 11689
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1559
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

DP
type: SiteQuality
SIO_000300: 5.27139e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.978e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.82e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.71e-1

QD
type: SiteQuality
SIO_000300: 1.846e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2719
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 157
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 893
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.209336074495102e-4
allele num: 8269
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 153
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.291e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.72e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 4.43924e5

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

FS
type: SiteQuality
SIO_000300: 1.335e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.074e0

VQSLOD
type: SiteQuality
SIO_000300: -1.843e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.22e-1

MQ
type: SiteQuality
SIO_000300: 5.897e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 663
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 151
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7464
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4818
num of homozygotes: 0

African
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allele count: 1
allele frequency: 4.032258064516129e-4
allele num: 2480
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.203e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.140000000000001e-2

FS
type: SiteQuality
SIO_000300: 1.0726e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e-1

DP
type: SiteQuality
SIO_000300: 4.1013e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

QD
type: SiteQuality
SIO_000300: 1.621e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2471
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 77
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4807
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 151
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7405
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.533742331288344e-3
allele num: 652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

DP
type: SiteQuality
SIO_000300: 4.0803e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.092e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 42869
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7464
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7847
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 537
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 4.619471070562421e-4
allele num: 8659
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3676
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

QD
type: SiteQuality
SIO_000300: 1.765e1

FS
type: SiteQuality
SIO_000300: 1.883e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

DP
type: SiteQuality
SIO_000300: 1.196703e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7861
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3663
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.333722287047841e-5
allele num: 42850
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.295e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.589e0

DP
type: SiteQuality
SIO_000300: 1.215301e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 42866
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3663
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 537
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 6.659563132658498e-4
allele num: 7508
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.81e-1

MQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
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VQSLOD
type: SiteQuality
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ClippingRankSum
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QD
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele frequency: 1.271617497456765e-4
allele num: 7864
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.332633543270352e-5
allele num: 42870
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3666
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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QD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
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FS
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

African
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.679895170348185e-5
allele num: 42736
num of homozygotes: 0

DP
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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FS
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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European (Non-Finnish)
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East Asian
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African
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allele num: 7841
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 534
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VQSLOD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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QD
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DP
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