19-9870664-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9870664
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9870664
    reference: chr 19
allele count: 1
allele frequency: 1.055386693684566e-5
allele num: 94752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-1224T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.230-46T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.227-46T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-75-1224T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.230-1224T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.230-1224T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.230-46T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.230-1224T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.383-1224T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13091
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

19-9870665-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9870665
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9870665
    reference: chr 19
allele count: 1
allele frequency: 1.054985863189433e-5
allele num: 94788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.383-1225T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.230-1225T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.230-47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.230-47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.230-1225T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.230-1225T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-75-1225T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.227-47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-1225T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13058
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18195
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3806
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6128
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

19-9870669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9870669
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9870669
    reference: chr 19
allele count: 271
allele frequency: 2.957611210546995e-3
allele num: 91628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.230-51G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.230-1229G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.383-1229G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.230-1229G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.227-51G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-75-1229G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.230-51G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-1229G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.230-1229G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12891
  bin: 1.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17962
  bin: 1.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 3.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 10605
  bin: 7.5e0
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 7970
  bin: 2.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8272
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2471
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2482
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5464
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 8
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: FS

19-9870670-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9870670
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9870670
    reference: chr 19
allele count: 95
allele frequency: 1.034587907300923e-3
allele num: 91824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.230-1230C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.230-52C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-75-1230C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.230-1230C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-1230C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.227-52C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.383-1230C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.230-52C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.230-1230C>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12860
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 18003
  bin: 1.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7940
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10621
  bin: 7.5e0
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2458
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10930
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 2
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS

19-9872710-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872710
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872710
    reference: chr 19
allele count: 1
allele frequency: 8.314763694415805e-6
allele num: 120268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.229+48A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.229+48A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.382+48A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.229+48A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.229+48A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.229+48A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-76+48A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.226+48A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3270A>G
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44705
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

19-9872711-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872711
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872711
    reference: chr 19
allele count: 93
allele frequency: 7.733244636620655e-4
allele num: 120260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-76+47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.382+47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.229+47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.229+47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3271T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.229+47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.229+47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.229+47T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.226+47T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 9.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4893
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

19-9872714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872714
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872714
    reference: chr 19
allele count: 3
allele frequency: 2.4942631946523e-5
allele num: 120276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-76+44C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.229+44C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.382+44C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.229+44C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3274C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.229+44C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.229+44C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.226+44C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.229+44C>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7212
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44695
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

19-9872719-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872719
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872719
    reference: chr 19
allele count: 1
allele frequency: 8.313795912937929e-6
allele num: 120282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.229+39T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3279T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.382+39T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.226+39T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.229+39T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.229+39T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.229+39T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-76+39T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.229+39T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

19-9872741-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872741
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872741
    reference: chr 19
allele count: 1
allele frequency: 8.311446524153063e-6
allele num: 120316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.226+17A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.229+17A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.229+17A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3301A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.229+17A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.229+17A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-76+17A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.382+17A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.229+17A>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44692
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-9872750-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872750
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872750
    reference: chr 19
allele count: 1
allele frequency: 8.311722853913159e-6
allele num: 120312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.229+8C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.226+8C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-76+8C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.229+8C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.382+8C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.229+8C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.229+8C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3310C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.229+8C>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
hgvs: c.229+8C>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-9872752-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872752
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872752
    reference: chr 19
allele count: 1
allele frequency: 8.311446524153063e-6
allele num: 120316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.229+6T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.229+6T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3312T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.229+6T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.382+6T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.226+6T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.229+6T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-76+6T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.229+6T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44691
  bin: 9.75e1
  variant carriers: 1
hgvs: c.229+6T>C
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-9872754-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872754
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872754
    reference: chr 19
allele count: 1
allele frequency: 8.310893919750009e-6
allele num: 120324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.226+4A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.229+4A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.229+4A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-76+4A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.229+4A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3314A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.382+4A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.229+4A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.229+4A>G
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.25e1
  variant carriers: 0
hgvs: c.229+4A>G
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-9872762-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872762
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872762
    reference: chr 19
allele count: 1
allele frequency: 8.312413758707254e-6
allele num: 120302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.225G>T
  hgvsp: ENST00000586814.1:c.225G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.378G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.225G>T
  hgvsp: ENST00000586293.1:c.225G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.225G>T
  hgvsp: ENST00000589453.1:c.225G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.225G>T
  hgvsp: ENST00000397902.2:c.225G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.225G>T
  hgvsp: ENST00000592587.1:c.225G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.222G>T
  hgvsp: ENST00000589412.1:c.222G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-80G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3322G>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7212
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu75Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

19-9872776-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872776
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872776
    reference: chr 19
allele count: 1
allele frequency: 8.316561600771776e-6
allele num: 120242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-94G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.211G>A
  hgvsp: ENSP00000466599.1:p.Val71Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.211G>A
  hgvsp: ENSP00000466236.1:p.Val71Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.211G>A
  hgvsp: ENSP00000380999.1:p.Val71Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.561G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.211G>A
  hgvsp: ENSP00000466175.1:p.Val71Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.211G>A
  hgvsp: ENSP00000467021.1:p.Val71Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3336G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.208G>A
  hgvsp: ENSP00000466547.1:p.Val70Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.364G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val71Met
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

19-9872784-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872784
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872784
    reference: chr 19
allele count: 1
allele frequency: 8.318913882603488e-6
allele num: 120208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.203G>C
  hgvsp: ENSP00000466236.1:p.Arg68Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.203G>C
  hgvsp: ENSP00000380999.1:p.Arg68Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.203G>C
  hgvsp: ENSP00000467021.1:p.Arg68Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.200G>C
  hgvsp: ENSP00000466547.1:p.Arg67Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-102G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.203G>C
  hgvsp: ENSP00000466175.1:p.Arg68Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.203G>C
  hgvsp: ENSP00000466599.1:p.Arg68Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.553G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.356G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3344G>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg68Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

19-9872784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872784
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872784
    reference: chr 19
allele count: 4
allele frequency: 3.327565553041395e-5
allele num: 120208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-102G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.203G>A
  hgvsp: ENSP00000466236.1:p.Arg68Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.356G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.203G>A
  hgvsp: ENSP00000380999.1:p.Arg68Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.203G>A
  hgvsp: ENSP00000467021.1:p.Arg68Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.203G>A
  hgvsp: ENSP00000466175.1:p.Arg68Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.203G>A
  hgvsp: ENSP00000466599.1:p.Arg68Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.200G>A
  hgvsp: ENSP00000466547.1:p.Arg67Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3344G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.553G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44691
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg68Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-9872787-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872787
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872787
    reference: chr 19
allele count: 1
allele frequency: 8.319467554076538e-6
allele num: 120200
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.200T>G
  hgvsp: ENSP00000380999.1:p.Leu67Arg
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.200T>G
  hgvsp: ENSP00000466175.1:p.Leu67Arg
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.200T>G
  hgvsp: ENSP00000466599.1:p.Leu67Arg
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.550T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.200T>G
  hgvsp: ENSP00000467021.1:p.Leu67Arg
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.353T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.197T>G
  hgvsp: ENSP00000466547.1:p.Leu66Arg
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.200T>G
  hgvsp: ENSP00000466236.1:p.Leu67Arg
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-105T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3347T>G
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6137
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu67Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

19-9872789-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872789
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872789
    reference: chr 19
allele count: 1
allele frequency: 8.320713584396998e-6
allele num: 120182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.195G>A
  hgvsp: ENST00000589412.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.198G>A
  hgvsp: ENST00000589453.1:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.198G>A
  hgvsp: ENST00000397902.2:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.198G>A
  hgvsp: ENST00000592587.1:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.198G>A
  hgvsp: ENST00000586814.1:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3349G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.198G>A
  hgvsp: ENST00000586293.1:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-107G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.351G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.548G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu66Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

19-9872806-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872806
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872806
    reference: chr 19
allele count: 1
allele frequency: 8.327642777435419e-6
allele num: 120082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.531T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.334T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.181T>C
  hgvsp: ENST00000397902.2:c.181T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3366T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-124T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.181T>C
  hgvsp: ENST00000586293.1:c.181T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.181T>C
  hgvsp: ENST00000589453.1:c.181T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.181T>C
  hgvsp: ENST00000586814.1:c.181T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.178T>C
  hgvsp: ENST00000589412.1:c.178T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.181T>C
  hgvsp: ENST00000592587.1:c.181T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu61Leu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-9872814-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872814
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872814
    reference: chr 19
allele count: 1
allele frequency: 8.332361224523806e-6
allele num: 120014
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.173T>C
  hgvsp: ENSP00000466599.1:p.Met58Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.326T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-132T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.173T>C
  hgvsp: ENSP00000380999.1:p.Met58Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.173T>C
  hgvsp: ENSP00000466175.1:p.Met58Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.170T>C
  hgvsp: ENSP00000466547.1:p.Met57Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.173T>C
  hgvsp: ENSP00000467021.1:p.Met58Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3374T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.523T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.173T>C
  hgvsp: ENSP00000466236.1:p.Met58Thr
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met58Thr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

19-9872823-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872823
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872823
    reference: chr 19
allele count: 8
allele frequency: 6.67044658639896e-5
allele num: 119932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.164G>A
  hgvsp: ENSP00000466236.1:p.Arg55His
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.164G>A
  hgvsp: ENSP00000466599.1:p.Arg55His
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-141G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.161G>A
  hgvsp: ENSP00000466547.1:p.Arg54His
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.317G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3383G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.164G>A
  hgvsp: ENSP00000467021.1:p.Arg55His
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.164G>A
  hgvsp: ENSP00000380999.1:p.Arg55His
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.514G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.164G>A
  hgvsp: ENSP00000466175.1:p.Arg55His
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44689
  bin: 9.75e1
  variant carriers: 8
hgvs: p.Arg55His
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

19-9872824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872824
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872824
    reference: chr 19
allele count: 3
allele frequency: 2.501667778519013e-5
allele num: 119920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.163C>T
  hgvsp: ENSP00000467021.1:p.Arg55Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.160C>T
  hgvsp: ENSP00000466547.1:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-142C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.163C>T
  hgvsp: ENSP00000466236.1:p.Arg55Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.163C>T
  hgvsp: ENSP00000380999.1:p.Arg55Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.163C>T
  hgvsp: ENSP00000466599.1:p.Arg55Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3384C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.163C>T
  hgvsp: ENSP00000466175.1:p.Arg55Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.513C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.316C>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg55Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/19-9872829-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872829
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872829
    reference: chr 19
allele count: 2
allele frequency: 1.668474180362059e-5
allele num: 119870
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.158T>G
  hgvsp: ENSP00000380999.1:p.Phe53Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.158T>G
  hgvsp: ENSP00000467021.1:p.Phe53Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.158T>G
  hgvsp: ENSP00000466236.1:p.Phe53Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3389T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.158T>G
  hgvsp: ENSP00000466599.1:p.Phe53Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-147T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.311T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.158T>G
  hgvsp: ENSP00000466175.1:p.Phe53Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.155T>G
  hgvsp: ENSP00000466547.1:p.Phe52Cys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.508T>G
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe53Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

19-9872839-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872839
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872839
    reference: chr 19
allele count: 4
allele frequency: 3.339901806886878e-5
allele num: 119764
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.301T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.148T>C
  hgvsp: ENSP00000466175.1:p.Ser50Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.148T>C
  hgvsp: ENSP00000380999.1:p.Ser50Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.498T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-157T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.145T>C
  hgvsp: ENSP00000466547.1:p.Ser49Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.148T>C
  hgvsp: ENSP00000466236.1:p.Ser50Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.148T>C
  hgvsp: ENSP00000466599.1:p.Ser50Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.148T>C
  hgvsp: ENSP00000467021.1:p.Ser50Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3399T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser50Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/19-9872840-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872840
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872840
    reference: chr 19
allele count: 1
allele frequency: 8.348778573694668e-6
allele num: 119778
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.147G>T
  hgvsp: ENST00000397902.2:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.147G>T
  hgvsp: ENST00000592587.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.147G>T
  hgvsp: ENST00000586814.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.497G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.300G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.144G>T
  hgvsp: ENST00000589412.1:c.144G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.147G>T
  hgvsp: ENST00000589453.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-158G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.147G>T
  hgvsp: ENST00000586293.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3400G>T
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44683
  bin: 9.75e1
  variant carriers: 1
hgvs: c.144G>T
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

19-9872840-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872840
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872840
    reference: chr 19
allele count: 1
allele frequency: 8.348778573694668e-6
allele num: 119778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.147G>C
  hgvsp: ENST00000592587.1:c.147G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.144G>C
  hgvsp: ENST00000589412.1:c.144G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.147G>C
  hgvsp: ENST00000397902.2:c.147G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.147G>C
  hgvsp: ENST00000589453.1:c.147G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-158G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.300G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.147G>C
  hgvsp: ENST00000586814.1:c.147G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3400G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.147G>C
  hgvsp: ENST00000586293.1:c.147G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.497G>C
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
hgvs: c.144G>C
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-9872844-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872844
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872844
    reference: chr 19
allele count: 6
allele frequency: 5.011107955969064e-5
allele num: 119734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143C>A
  hgvsp: ENSP00000467021.1:p.Ala48Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143C>A
  hgvsp: ENSP00000380999.1:p.Ala48Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143C>A
  hgvsp: ENSP00000466236.1:p.Ala48Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.296C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3404C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143C>A
  hgvsp: ENSP00000466175.1:p.Ala48Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-3C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143C>A
  hgvsp: ENSP00000466599.1:p.Ala48Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-3C>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4922
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala48Glu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-9872851-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872851
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872851
    reference: chr 19
allele count: 1
allele frequency: 8.356871855726965e-6
allele num: 119662
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-7C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-7C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-7C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3411C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-10C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-10C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-7C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.289C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-7C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-7C>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4922
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: c.143-7C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-9872853-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872853
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872853
    reference: chr 19
allele count: 1
allele frequency: 8.360365180751095e-6
allele num: 119612
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-12T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.287T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-12T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-9T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3413T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-9T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-9T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-9T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-9T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-9T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

19-9872862-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872862
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872862
    reference: chr 19
allele count: 3
allele frequency: 2.509662199467951e-5
allele num: 119538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-21G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-18G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-18G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-18G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-21G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.278G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-18G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3422G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-18G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-18G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-9872863-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872863
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872863
    reference: chr 19
allele count: 6
allele frequency: 5.019072475406545e-5
allele num: 119544
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-22T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-19T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.277T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-19T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-19T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-19T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-22T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3423T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-19T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-19T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-9872863-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872863
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872863
    reference: chr 19
allele count: 1
allele frequency: 8.365120792344242e-6
allele num: 119544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-19T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-19T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.277T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-19T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-22T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-22T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3423T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-19T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-19T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-19T>A
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

19-9872870-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872870
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872870
    reference: chr 19
allele count: 1
allele frequency: 8.368060785593547e-6
allele num: 119502
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3430C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-26C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-26C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-26C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-26C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-29C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-29C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.270C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-26C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-26C>A
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

19-9872870-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872870
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872869
    reference: chr 19
allele count: 31
allele frequency: 2.594098843534e-4
allele num: 119502
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-27delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-27delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3431delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-27delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-27delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-27delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-27delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.269delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-30delT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-30delT
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: GA
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-9872875-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872875
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872875
    reference: chr 19
allele count: 1
allele frequency: 8.37408722449253e-6
allele num: 119416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3435G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-34G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-31G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.265G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-31G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-31G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-34G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-31G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-31G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-31G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4926
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-9872878-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872878
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872878
    reference: chr 19
allele count: 1
allele frequency: 8.373806732540612e-6
allele num: 119420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-34A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-34A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-34A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.262A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-37A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-37A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3438A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-34A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-34A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-34A>G
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

19-9872883-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872883
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872883
    reference: chr 19
allele count: 2
allele frequency: 1.675294432996599e-5
allele num: 119382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-39C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3443C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-39C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-39C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.257C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-39C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-39C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-39C>A
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4401
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-9872893-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872893
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872893
    reference: chr 19
allele count: 1
allele frequency: 8.385603595746822e-6
allele num: 119252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-49G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3453G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-49G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-52G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-52G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-49G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-49G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-49G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-49G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.247G>T
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

19-9872893-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872893
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872893
    reference: chr 19
allele count: 3
allele frequency: 2.515681078724046e-5
allele num: 119252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-52G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-49G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-49G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-49G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-49G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-49G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.247G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-52G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3453G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-49G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD

19-9872894-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872894
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872894
    reference: chr 19
allele count: 1
allele frequency: 8.386869517084054e-6
allele num: 119234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.246T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-53T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-50T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-53T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-50T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3454T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-50T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-50T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-50T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-50T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

19-9872895-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872895
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872895
    reference: chr 19
allele count: 1
allele frequency: 8.388135820695209e-6
allele num: 119216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-51A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.245A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-51A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-51A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-51A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3455A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-51A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-54A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-54A>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-51A>T
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

19-9872895-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9872895
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9872895
    reference: chr 19
allele count: 3
allele frequency: 2.516440746208563e-5
allele num: 119216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-3455A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-159-54A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.143-51A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.143-51A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.493-51A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.143-51A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000591377
  gene symbol: ZNF846
  hgvsc: ENST00000591377.1:n.245A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.143-51A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.143-51A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.143-54A>G
  variant of: http://identifiers.org/hgnc/27260
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-9873916-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873916
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873916
    reference: chr 19
allele count: 4
allele frequency: 3.538382605311112e-5
allele num: 113046
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.142+42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.142+42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-160+42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.142+42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.142+42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4476C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.142+42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.492+42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.142+42C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.341+42C>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2262
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

19-9873927-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873927
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873927
    reference: chr 19
allele count: 2
allele frequency: 1.765786127984179e-5
allele num: 113264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.492+31C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.142+31C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.142+31C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.341+31C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4487C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.142+31C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.142+31C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-160+31C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.142+31C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.142+31C>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

19-9873928-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873928
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873928
    reference: chr 19
allele count: 52
allele frequency: 4.589747210845925e-4
allele num: 113296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-160+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.142+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.142+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.142+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.142+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.142+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.492+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.341+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.142+30C>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4488C>G
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6468
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

19-9873944-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873944
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873944
    reference: chr 19
allele count: 2
allele frequency: 1.752111294109402e-5
allele num: 114148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.492+14C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.142+14C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.142+14C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.142+14C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-160+14C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.142+14C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4504C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.341+14C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.142+14C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.142+14C>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5056
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

19-9873947-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873947
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873947
    reference: chr 19
allele count: 5187
allele frequency: 4.5095720818626e-2
allele num: 115022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.492+11C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.142+11C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.142+11C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.142+11C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4507C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.341+11C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-160+11C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.142+11C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.142+11C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.142+11C>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 2.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 3.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 8.25e1
  variant carriers: 378
genotype depth: GenotypeDepth
  all individuals: 5500
  bin: 9.75e1
  variant carriers: 1643
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 7.75e1
  variant carriers: 378
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 1.25e1
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 8.75e1
  variant carriers: 353
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3858
  bin: 4.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 7.5e0
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 6028
  bin: 5.25e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 4.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 6071
  bin: 5.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 6.25e1
  variant carriers: 223
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 9.25e1
  variant carriers: 319
genotype depth: GenotypeDepth
  all individuals: 5012
  bin: 6.75e1
  variant carriers: 288
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.75e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 7.25e1
  variant carriers: 332
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 8.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 10
num of homozygotes: 170
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

19-9873948-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873948
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873948
    reference: chr 19
allele count: 1
allele frequency: 8.690060309018545e-6
allele num: 115074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.142+10G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-160+10G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.142+10G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.142+10G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.492+10G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.142+10G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.142+10G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4508G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.341+10G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.142+10G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

19-9873956-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873956
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873956
    reference: chr 19
allele count: 1
allele frequency: 8.623663332183512e-6
allele num: 115960
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.341+2T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.142+2T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.142+2T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-160+2T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4516T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.492+2T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.142+2T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.142+2T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.142+2T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.142+2T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 9.25e1
  variant carriers: 0
hgvs: c.142+2T>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS

19-9873963-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873963
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873963
    reference: chr 19
allele count: 9
allele frequency: 7.695596408721675e-5
allele num: 116950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-165T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.137T>A
  hgvsp: ENSP00000466175.1:p.Ile46Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.137T>A
  hgvsp: ENSP00000466236.1:p.Ile46Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.137T>A
  hgvsp: ENSP00000467021.1:p.Ile46Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.137T>A
  hgvsp: ENSP00000380999.1:p.Ile46Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.487T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.336T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.137T>A
  hgvsp: ENSP00000466599.1:p.Ile46Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4523T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.137T>A
  hgvsp: ENSP00000466547.1:p.Ile46Lys
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4638
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile46Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum

19-9873967-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873967
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873967
    reference: chr 19
allele count: 1
allele frequency: 8.503979862575686e-6
allele num: 117592
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.133A>G
  hgvsp: ENSP00000466599.1:p.Ile45Val
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.483A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.133A>G
  hgvsp: ENSP00000380999.1:p.Ile45Val
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-169A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4527A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.133A>G
  hgvsp: ENSP00000466547.1:p.Ile45Val
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.133A>G
  hgvsp: ENSP00000466236.1:p.Ile45Val
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.133A>G
  hgvsp: ENSP00000467021.1:p.Ile45Val
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.133A>G
  hgvsp: ENSP00000466175.1:p.Ile45Val
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.332A>G
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile45Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-9873985-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873985
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873985
    reference: chr 19
allele count: 3
allele frequency: 2.510712372790573e-5
allele num: 119488
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.115G>C
  hgvsp: ENSP00000466547.1:p.Glu39Gln
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.115G>C
  hgvsp: ENSP00000467021.1:p.Glu39Gln
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.115G>C
  hgvsp: ENSP00000466175.1:p.Glu39Gln
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-187G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.115G>C
  hgvsp: ENSP00000380999.1:p.Glu39Gln
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.115G>C
  hgvsp: ENSP00000466236.1:p.Glu39Gln
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.115G>C
  hgvsp: ENSP00000466599.1:p.Glu39Gln
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.465G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4545G>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.314G>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu39Gln
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-9873990-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873990
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873990
    reference: chr 19
allele count: 1
allele frequency: 8.34278849362611e-6
allele num: 119864
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-192T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4550T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.110T>C
  hgvsp: ENSP00000466175.1:p.Met37Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.110T>C
  hgvsp: ENSP00000466547.1:p.Met37Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.110T>C
  hgvsp: ENSP00000466236.1:p.Met37Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.110T>C
  hgvsp: ENSP00000467021.1:p.Met37Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.110T>C
  hgvsp: ENSP00000380999.1:p.Met37Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.309T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.110T>C
  hgvsp: ENSP00000466599.1:p.Met37Thr
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.460T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met37Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-9873992-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9873992
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9873992
    reference: chr 19
allele count: 1
allele frequency: 8.333888925928395e-6
allele num: 119992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-194G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.108G>T
  hgvsp: ENST00000586814.1:c.108G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.108G>T
  hgvsp: ENST00000589453.1:c.108G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.108G>T
  hgvsp: ENST00000397902.2:c.108G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4552G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.108G>T
  hgvsp: ENST00000586293.1:c.108G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.458G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.108G>T
  hgvsp: ENST00000592587.1:c.108G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.108G>T
  hgvsp: ENST00000589412.1:c.108G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.307G>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val36Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

19-9874001-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874001
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874001
    reference: chr 19
allele count: 1
allele frequency: 8.307027745472669e-6
allele num: 120380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.99C>T
  hgvsp: ENST00000586814.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-203C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.99C>T
  hgvsp: ENST00000589453.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4561C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.449C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.99C>T
  hgvsp: ENST00000592587.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.298C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.99C>T
  hgvsp: ENST00000586293.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.99C>T
  hgvsp: ENST00000397902.2:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.99C>T
  hgvsp: ENST00000589412.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr33Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

19-9874002-TAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874002
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874000
    reference: chr 19
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.295_296delCT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.96_97delCT
  hgvsp: ENSP00000466599.1:p.Tyr33GlnfsTer18
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.96_97delCT
  hgvsp: ENSP00000380999.1:p.Tyr33GlnfsTer18
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-206_-205delCT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.446_447delCT
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.96_97delCT
  hgvsp: ENSP00000466236.1:p.Tyr33GlnfsTer18
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.96_97delCT
  hgvsp: ENSP00000467021.1:p.Tyr33GlnfsTer18
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.96_97delCT
  hgvsp: ENSP00000466547.1:p.Tyr33GlnfsTer17
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.96_97delCT
  hgvsp: ENSP00000466175.1:p.Tyr33GlnfsTer18
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4564_-75-4563delCT
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr33GlnfsTer18
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: TAG
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-9874022-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874022
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874022
    reference: chr 19
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.78T>A
  hgvsp: ENSP00000467021.1:p.Asp26Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.277T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.428T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.78T>A
  hgvsp: ENSP00000380999.1:p.Asp26Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.78T>A
  hgvsp: ENSP00000466599.1:p.Asp26Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.78T>A
  hgvsp: ENSP00000466547.1:p.Asp26Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.78T>A
  hgvsp: ENSP00000466175.1:p.Asp26Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-224T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.78T>A
  hgvsp: ENSP00000466236.1:p.Asp26Glu
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4582T>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp26Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-9874026-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874026
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874026
    reference: chr 19
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.74T>C
  hgvsp: ENSP00000466175.1:p.Leu25Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4586T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.74T>C
  hgvsp: ENSP00000466547.1:p.Leu25Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.74T>C
  hgvsp: ENSP00000467021.1:p.Leu25Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.424T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.74T>C
  hgvsp: ENSP00000466599.1:p.Leu25Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.74T>C
  hgvsp: ENSP00000466236.1:p.Leu25Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.273T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-228T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.74T>C
  hgvsp: ENSP00000380999.1:p.Leu25Ser
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu25Ser
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

19-9874027-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874027
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874027
    reference: chr 19
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.423T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.73T>A
  hgvsp: ENSP00000380999.1:p.Leu25Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.73T>A
  hgvsp: ENSP00000467021.1:p.Leu25Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-229T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4587T>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.73T>A
  hgvsp: ENSP00000466175.1:p.Leu25Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.73T>A
  hgvsp: ENSP00000466547.1:p.Leu25Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.73T>A
  hgvsp: ENSP00000466236.1:p.Leu25Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.73T>A
  hgvsp: ENSP00000466599.1:p.Leu25Met
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.272T>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu25Met
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

19-9874029-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874029
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874029
    reference: chr 19
allele count: 2
allele frequency: 1.655272871732905e-5
allele num: 120826
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4589T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.71T>C
  hgvsp: ENSP00000466236.1:p.Leu24Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.71T>C
  hgvsp: ENSP00000466547.1:p.Leu24Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.71T>C
  hgvsp: ENSP00000466599.1:p.Leu24Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.71T>C
  hgvsp: ENSP00000467021.1:p.Leu24Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-231T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.71T>C
  hgvsp: ENSP00000466175.1:p.Leu24Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.71T>C
  hgvsp: ENSP00000380999.1:p.Leu24Ser
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.421T>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.270T>C
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu24Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/19-9874031-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874031
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874031
    reference: chr 19
allele count: 2
allele frequency: 1.655300271469245e-5
allele num: 120824
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.69T>G
  hgvsp: ENST00000397902.2:c.69T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4591T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.69T>G
  hgvsp: ENST00000586293.1:c.69T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.69T>G
  hgvsp: ENST00000589453.1:c.69T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.69T>G
  hgvsp: ENST00000592587.1:c.69T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.69T>G
  hgvsp: ENST00000586814.1:c.69T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-233T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.268T>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.69T>G
  hgvsp: ENST00000589412.1:c.69T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.419T>G
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr23Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

19-9874033-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874033
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874033
    reference: chr 19
allele count: 1
allele frequency: 8.278831029058698e-6
allele num: 120790
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.67A>G
  hgvsp: ENSP00000380999.1:p.Thr23Ala
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4593A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.67A>G
  hgvsp: ENSP00000467021.1:p.Thr23Ala
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.67A>G
  hgvsp: ENSP00000466599.1:p.Thr23Ala
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.417A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.67A>G
  hgvsp: ENSP00000466547.1:p.Thr23Ala
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.67A>G
  hgvsp: ENSP00000466236.1:p.Thr23Ala
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.266A>G
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.67A>G
  hgvsp: ENSP00000466175.1:p.Thr23Ala
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-235A>G
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr23Ala
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-9874034-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874034
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874034
    reference: chr 19
allele count: 7
allele frequency: 5.794893870657969e-5
allele num: 120796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.66G>A
  hgvsp: ENSP00000467021.1:p.Trp22Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.66G>A
  hgvsp: ENSP00000466599.1:p.Trp22Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-236G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.265G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.416G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.66G>A
  hgvsp: ENSP00000466236.1:p.Trp22Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.66G>A
  hgvsp: ENSP00000380999.1:p.Trp22Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.66G>A
  hgvsp: ENSP00000466547.1:p.Trp22Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.66G>A
  hgvsp: ENSP00000466175.1:p.Trp22Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4594G>A
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Trp22Ter
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/19-9874039-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874039
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874039
    reference: chr 19
allele count: 1
allele frequency: 8.281847845891375e-6
allele num: 120746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.411G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.260G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.61G>T
  hgvsp: ENSP00000466599.1:p.Glu21Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.61G>T
  hgvsp: ENSP00000467021.1:p.Glu21Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.61G>T
  hgvsp: ENSP00000380999.1:p.Glu21Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.61G>T
  hgvsp: ENSP00000466175.1:p.Glu21Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.61G>T
  hgvsp: ENSP00000466547.1:p.Glu21Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.61G>T
  hgvsp: ENSP00000466236.1:p.Glu21Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4599G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-241G>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu21Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

19-9874039-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874039
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874039
    reference: chr 19
allele count: 2
allele frequency: 1.656369569178275e-5
allele num: 120746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-241G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.411G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.61G>A
  hgvsp: ENSP00000466547.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.61G>A
  hgvsp: ENSP00000466175.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.61G>A
  hgvsp: ENSP00000467021.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.260G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.61G>A
  hgvsp: ENSP00000380999.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4599G>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.61G>A
  hgvsp: ENSP00000466236.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.61G>A
  hgvsp: ENSP00000466599.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu21Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/19-9874042-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874042
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874042
    reference: chr 19
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.58G>T
  hgvsp: ENSP00000466599.1:p.Glu20Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.58G>T
  hgvsp: ENSP00000466547.1:p.Glu20Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.58G>T
  hgvsp: ENSP00000466236.1:p.Glu20Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.408G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.58G>T
  hgvsp: ENSP00000467021.1:p.Glu20Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-244G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.58G>T
  hgvsp: ENSP00000466175.1:p.Glu20Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.257G>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.58G>T
  hgvsp: ENSP00000380999.1:p.Glu20Ter
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4602G>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49056
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu20Ter
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-9874044-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874044
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874044
    reference: chr 19
allele count: 1
allele frequency: 8.288437629506838e-6
allele num: 120650
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.56A>C
  hgvsp: ENSP00000467021.1:p.Gln19Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.56A>C
  hgvsp: ENSP00000466236.1:p.Gln19Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.406A>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-246A>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4604A>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.56A>C
  hgvsp: ENSP00000466175.1:p.Gln19Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.56A>C
  hgvsp: ENSP00000466547.1:p.Gln19Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.255A>C
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.56A>C
  hgvsp: ENSP00000466599.1:p.Gln19Pro
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.56A>C
  hgvsp: ENSP00000380999.1:p.Gln19Pro
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln19Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

19-9874047-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874047
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874047
    reference: chr 19
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.53C>T
  hgvsp: ENSP00000466175.1:p.Thr18Ile
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.53C>T
  hgvsp: ENSP00000467021.1:p.Thr18Ile
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.53C>T
  hgvsp: ENSP00000466599.1:p.Thr18Ile
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.252C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.403C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.53C>T
  hgvsp: ENSP00000380999.1:p.Thr18Ile
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.53C>T
  hgvsp: ENSP00000466547.1:p.Thr18Ile
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-249C>T
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.53C>T
  hgvsp: ENSP00000466236.1:p.Thr18Ile
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4607C>T
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr18Ile
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

19-9874047-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9874047
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 9874047
    reference: chr 19
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467021
  ensembl transcript: ENST00000589453
  gene symbol: ZNF846
  hgvsc: ENST00000589453.1:c.53C>A
  hgvsp: ENSP00000467021.1:p.Thr18Asn
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466547
  ensembl transcript: ENST00000589412
  gene symbol: ZNF846
  hgvsc: ENST00000589412.1:c.53C>A
  hgvsp: ENSP00000466547.1:p.Thr18Asn
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466236
  ensembl transcript: ENST00000586293
  gene symbol: ZNF846
  hgvsc: ENST00000586293.1:c.53C>A
  hgvsp: ENSP00000466236.1:p.Thr18Asn
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000467891
  ensembl transcript: ENST00000592859
  gene symbol: ZNF846
  hgvsc: ENST00000592859.1:c.-75-4607C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000465467
  ensembl transcript: ENST00000588267
  gene symbol: ZNF846
  hgvsc: ENST00000588267.1:c.-249C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000587650
  gene symbol: ZNF846
  hgvsc: ENST00000587650.1:n.403C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196605
  ensembl transcript: ENST00000590471
  gene symbol: ZNF846
  hgvsc: ENST00000590471.1:n.252C>A
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466599
  ensembl transcript: ENST00000586814
  gene symbol: ZNF846
  hgvsc: ENST00000586814.1:c.53C>A
  hgvsp: ENSP00000466599.1:p.Thr18Asn
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000380999
  ensembl transcript: ENST00000397902
  gene symbol: ZNF846
  hgvsc: ENST00000397902.2:c.53C>A
  hgvsp: ENSP00000380999.1:p.Thr18Asn
  variant of: http://identifiers.org/hgnc/27260
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196605
  ensembl protein: ENSP00000466175
  ensembl transcript: ENST00000592587
  gene symbol: ZNF846
  hgvsc: ENST00000592587.1:c.53C>A
  hgvsp: ENSP00000466175.1:p.Thr18Asn
  variant of: http://identifiers.org/hgnc/27260
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr18Asn
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 5326
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3981
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1451
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3359
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8368
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.407261469180974e-4
allele num: 7106
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

DP
type: SiteQuality
SIO_000300: 1.165316e6

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.027e-1

QD
type: SiteQuality
SIO_000300: 9.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

GenotypeQuality
all individuals: 3070
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4342
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8358
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5314
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12596
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2449
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7116
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.324503311258278e-4
allele num: 7550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.164836e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.688e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 3478
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 307
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2189
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10774
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 190
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 894
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2421
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3315
bin: 9.75e1
variant carriers: 249

GenotypeQuality
all individuals: 6070
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 458
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1306
bin: 6.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5512
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.735229759299781e-4
allele num: 7312
num of homozygotes: 0

South Asian
type: Population
allele count: 237
allele frequency: 1.659663865546218e-2
allele num: 14280
num of homozygotes: 7

East Asian
type: Population
allele count: 16
allele frequency: 2.336448598130841e-3
allele num: 6848
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.954173891503591e-4
allele num: 8074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.455795677799607e-4
allele num: 48864
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 5.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

DP
type: SiteQuality
SIO_000300: 1.161365e6

QD
type: SiteQuality
SIO_000300: 1.439e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 5329
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 539
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3498
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8306
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2479
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5195
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 637
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6095
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 9.75e1
variant carriers: 92

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1334
bin: 6.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.995942353435007e-5
allele num: 14294
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.230012300123001e-4
allele num: 8130
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.910360884749709e-4
allele num: 6872
num of homozygotes: 0

African
type: Population
allele count: 85
allele frequency: 1.159301691216585e-2
allele num: 7332
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.226642678987611e-4
allele num: 48914
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.414e1

DP
type: SiteQuality
SIO_000300: 1.160917e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.804e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4883
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.301e0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

DP
type: SiteQuality
SIO_000300: 3.727995e6

QD
type: SiteQuality
SIO_000300: 1.336e1

GenotypeQuality
all individuals: 1548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44716
bin: 9.75e1
variant carriers: 93

GenotypeQuality
all individuals: 980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 4.12796697626419e-4
allele num: 9690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.360749924402782e-3
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.430724355858046e-4
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 75
allele frequency: 1.128600234748849e-3
allele num: 66454
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.728821e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

MQ
type: SiteQuality
SIO_000300: 5.986e1

QD
type: SiteQuality
SIO_000300: 1.625e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5110
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.513314277117496e-5
allele num: 66470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

QD
type: SiteQuality
SIO_000300: 1.379e1

VQSLOD
type: SiteQuality
SIO_000300: 7.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.103e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 6.775e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

DP
type: SiteQuality
SIO_000300: 3.726969e6

GenotypeQuality
all individuals: 144
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.504392827055001e-5
allele num: 66472
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South Asian
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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FS
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 9684
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.065752759917505e-5
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ClippingRankSum
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MQRankSum
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FS
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QD
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele frequency: 1.504392827055001e-5
allele num: 66472
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

FS
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MQRankSum
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QD
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MQ
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VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16492
num of homozygotes: 0

East Asian
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

Latino
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QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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FS
type: SiteQuality
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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African
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East Asian
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European (Finnish)
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num of homozygotes: 0

Latino
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QD
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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MQ
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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VQSLOD
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ClippingRankSum
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FS
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MQ
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ReadPosRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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MQ
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FS
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BaseQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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European (Non-Finnish)
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South Asian
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East Asian
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010687942194791e-5
allele num: 66430
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213592233009709e-4
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 3.734791e6

QD
type: SiteQuality
SIO_000300: 1.152e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.171e0

FS
type: SiteQuality
SIO_000300: 1.112e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.52e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44689
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.193e1

VQSLOD
type: SiteQuality
SIO_000300: 5.590000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.425e0

FS
type: SiteQuality
SIO_000300: 1.147e0

DP
type: SiteQuality
SIO_000300: 3.733849e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.76e-1

GenotypeQuality
all individuals: 1876
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e0

MQRankSum
type: SiteQuality
SIO_000300: -6.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.27e-1

DP
type: SiteQuality
SIO_000300: 3.733697e6

FS
type: SiteQuality
SIO_000300: 2.453e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.063e0

VQSLOD
type: SiteQuality
SIO_000300: 8.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.169e1

MQ
type: SiteQuality
SIO_000300: 5.988e1

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2159
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variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507068149621726e-5
allele num: 66354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 2.768e0

QD
type: SiteQuality
SIO_000300: 1.446e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.457e0

DP
type: SiteQuality
SIO_000300: 3.732345e6

GenotypeQuality
all individuals: 6001
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44689
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2156
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 909
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1537
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variant carriers: 0

GenotypeQuality
all individuals: 968
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variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507977199384745e-5
allele num: 66314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.73155e6

QD
type: SiteQuality
SIO_000300: 1.415e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.996e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e0

MQRankSum
type: SiteQuality
SIO_000300: -3.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.667e0

GenotypeQuality
all individuals: 476
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 2152
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GenotypeQuality
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GenotypeQuality
all individuals: 963
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1875
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GenotypeQuality
all individuals: 910
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.056348655419069e-4
allele num: 66266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.255e1

DP
type: SiteQuality
SIO_000300: 3.731274e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.261e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.041666666666667e-4
allele num: 9600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018321209743141e-5
allele num: 66262
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.25e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.364e1

DP
type: SiteQuality
SIO_000300: 3.730316e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.042970379641218e-4
allele num: 9588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076810889645114e-5
allele num: 16456
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 1.405e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.78e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 1621
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66158
num of homozygotes: 0

African
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allele count: 4
allele frequency: 4.179728317659352e-4
allele num: 9570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

FS
type: SiteQuality
SIO_000300: 6.548e0

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

DP
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SIO_000300: 3.728009e6

QD
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SIO_000300: 1.417e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9572
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66164
num of homozygotes: 0

Latino
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allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
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VQSLOD
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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DP
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ClippingRankSum
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SIO_000300: 6.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.044713748432929e-4
allele num: 9572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66164
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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FS
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MQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 6
allele frequency: 3.647859922178988e-4
allele num: 16448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66136
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.989e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.958e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
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InbreedingCoeff
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SIO_000300: 8.0e-4

MQRankSum
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SIO_000300: -1.25e-1

ReadPosRankSum
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QD
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SIO_000300: 1.354e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.084945843981989e-5
allele num: 16434
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.725261e6

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
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SIO_000300: -4.2e-1

QD
type: SiteQuality
SIO_000300: 1.344e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.51336299524804e-5
allele num: 66078
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9538
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

Other
type: Population
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allele num: 890
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-1

FS
type: SiteQuality
SIO_000300: 1.734e0

ReadPosRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQ
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SIO_000300: 5.92e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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allele num: 66038
num of homozygotes: 0

Latino
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allele frequency: 1.73973556019485e-4
allele num: 11496
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
type: Population
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QD
type: SiteQuality
SIO_000300: 1.159e1

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

VQSLOD
type: SiteQuality
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DP
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 890
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66040
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South Asian
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allele frequency: 3.654525520769887e-4
allele num: 16418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.720355e6

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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SIO_000300: 8.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

QD
type: SiteQuality
SIO_000300: 1.286e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.98e-1

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-5
allele num: 66040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.720355e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.98e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

FS
type: SiteQuality
SIO_000300: 2.582e0

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.72e-1

GenotypeQuality
all individuals: 4958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9520
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66008
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

QD
type: SiteQuality
SIO_000300: 1.604e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e0

DP
type: SiteQuality
SIO_000300: 3.715099e6

MQ
type: SiteQuality
SIO_000300: 6.036e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 31

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.050420168067227e-4
allele num: 9520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 4.544903648042662e-4
allele num: 66008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 3.715099e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e-1

MQ
type: SiteQuality
SIO_000300: 6.036e1

QD
type: SiteQuality
SIO_000300: 1.604e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e0

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.25e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.100536847242558e-5
allele num: 16392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

DP
type: SiteQuality
SIO_000300: 3.708904e6

FS
type: SiteQuality
SIO_000300: 3.34e0

QD
type: SiteQuality
SIO_000300: 1.558e1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.092e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e0

VQSLOD
type: SiteQuality
SIO_000300: 6.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1905
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.548e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.228e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

DP
type: SiteQuality
SIO_000300: 3.707042e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.27e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.032876379958753e-5
allele num: 65944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9502
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.94e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.701993e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.758e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517819197377208e-5
allele num: 65884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 8550
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.984e0

DP
type: SiteQuality
SIO_000300: 3.694088e6

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.75e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44659
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.553457592131625e-5
allele num: 65884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.984e0

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.694088e6

QD
type: SiteQuality
SIO_000300: 1.399e1

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

GenotypeQuality
all individuals: 183
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44659
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.170138076293003e-4
allele num: 8546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

DP
type: SiteQuality
SIO_000300: 3.69295e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

QD
type: SiteQuality
SIO_000300: 1.501e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.75e-1

GenotypeQuality
all individuals: 1504
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1459
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 246
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.170138076293003e-4
allele num: 8546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65870
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

FS
type: SiteQuality
SIO_000300: 2.016e0

MQRankSum
type: SiteQuality
SIO_000300: 6.68e-1

QD
type: SiteQuality
SIO_000300: 1.568e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.148e0

DP
type: SiteQuality
SIO_000300: 3.692946e6

VQSLOD
type: SiteQuality
SIO_000300: 3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
all individuals: 359
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1840
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44660
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65870
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.340276152586005e-4
allele num: 8546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

FS
type: SiteQuality
SIO_000300: 2.016e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 3.692946e6

QD
type: SiteQuality
SIO_000300: 1.568e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.148e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
all individuals: 819
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48866
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 683
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.63764531288647e-5
allele num: 64688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.112e0

VQSLOD
type: SiteQuality
SIO_000300: 4.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.048e1

FS
type: SiteQuality
SIO_000300: 5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

DP
type: SiteQuality
SIO_000300: 3.445672e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2989
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48868
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 490
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.089280197713933e-5
allele num: 64740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.93e-1

DP
type: SiteQuality
SIO_000300: 3.449893e6

FS
type: SiteQuality
SIO_000300: 1.363e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.985e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 2.344e1

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.594e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.29e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
all individuals: 1316
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48875
bin: 9.75e1
variant carriers: 52

GenotypeQuality
all individuals: 213
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 51
allele frequency: 5.235064668445905e-3
allele num: 9742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64748
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.255e0

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

DP
type: SiteQuality
SIO_000300: 3.451238e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.6e-1

QD
type: SiteQuality
SIO_000300: 1.449e1

GenotypeQuality
all individuals: 815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3196
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48870
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 991
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.077775383952479e-5
allele num: 64982
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

DP
type: SiteQuality
SIO_000300: 3.459627e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.118e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

FS
type: SiteQuality
SIO_000300: 3.701e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

QD
type: SiteQuality
SIO_000300: 1.135e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

GenotypeQuality
all individuals: 310
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 680
bin: 6.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1790
bin: 6.25e1
variant carriers: 14

GenotypeQuality
all individuals: 440
bin: 7.25e1
variant carriers: 8

GenotypeQuality
all individuals: 78
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 13

GenotypeQuality
all individuals: 372
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 16

GenotypeQuality
all individuals: 773
bin: 7.75e1
variant carriers: 22

GenotypeQuality
all individuals: 400
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 2696
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 49915
bin: 9.75e1
variant carriers: 4964

GenotypeQuality
all individuals: 921
bin: 8.25e1
variant carriers: 16

Latino
type: Population
allele count: 238
allele frequency: 2.064538514920194e-2
allele num: 11528
num of homozygotes: 4

Other
type: Population
allele count: 41
allele frequency: 4.812206572769953e-2
allele num: 852
num of homozygotes: 2

South Asian
type: Population
allele count: 1504
allele frequency: 1.204549094986385e-1
allele num: 12486
num of homozygotes: 91

East Asian
type: Population
allele count: 137
allele frequency: 1.587117701575533e-2
allele num: 8632
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 232
allele frequency: 3.507710916238282e-2
allele num: 6614
num of homozygotes: 6

African
type: Population
allele count: 86
allele frequency: 8.786268900694729e-3
allele num: 9788
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 2949
allele frequency: 4.528423574214551e-2
allele num: 65122
num of homozygotes: 60

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

FS
type: SiteQuality
SIO_000300: 2.057e0

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

DP
type: SiteQuality
SIO_000300: 3.609695e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.99e-2

QD
type: SiteQuality
SIO_000300: 1.292e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.315e0

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 791
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535155050660117e-5
allele num: 65140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.238e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.48e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

FS
type: SiteQuality
SIO_000300: 2.294e0

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.831e0

DP
type: SiteQuality
SIO_000300: 3.541247e6

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65354
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.082e0

MQRankSum
type: SiteQuality
SIO_000300: -8.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.529e0

MQ
type: SiteQuality
SIO_000300: 5.882e1

QD
type: SiteQuality
SIO_000300: 1.444e1

DP
type: SiteQuality
SIO_000300: 3.5491e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 5.584e0

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 9.135200974421437e-4
allele num: 9852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

DP
type: SiteQuality
SIO_000300: 3.559905e6

QD
type: SiteQuality
SIO_000300: 1.327e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

GenotypeQuality
all individuals: 457
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 71
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519987840097279e-5
allele num: 65790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14234
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.804e0

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

DP
type: SiteQuality
SIO_000300: 3.566214e6

VQSLOD
type: SiteQuality
SIO_000300: -3.237e-1

QD
type: SiteQuality
SIO_000300: 1.626e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.036e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015954398769491e-5
allele num: 66314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9958
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.518e1

FS
type: SiteQuality
SIO_000300: 5.449e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 3.58772e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.021e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.591377e6

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.723e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.38e0

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.4e-1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 2.631e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 3.592712e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.57e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 49057
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 517
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503262078710802e-5
allele num: 66522
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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SIO_000300: 6.0e1

MQRankSum
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ReadPosRankSum
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SIO_000300: 7.08e-1

ClippingRankSum
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QD
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.08e-1

DP
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SIO_000300: 3.596869e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 900
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16060
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African
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allele frequency: 0.0e0
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East Asian
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FS
type: SiteQuality
SIO_000300: 8.118e0

BaseQRankSum
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QD
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MQ
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
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European (Non-Finnish)
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allele count: 1
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allele num: 66564
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FS
type: SiteQuality
SIO_000300: 5.31e-1

ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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DP
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.877e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.72951936174353e-5
allele num: 10278
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 9.31e-1

InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 5.901e1

VQSLOD
type: SiteQuality
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DP
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SIO_000300: 3.601292e6

FS
type: SiteQuality
SIO_000300: 7.04e0

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
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VQSLOD
type: SiteQuality
SIO_000300: -7.59e-1

FS
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

South Asian
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Other
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African
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Latino
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allele num: 11576
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European (Finnish)
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num of homozygotes: 0

East Asian
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BaseQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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FS
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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South Asian
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African
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European (Non-Finnish)
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Other
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European (Finnish)
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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MQRankSum
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DP
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MQ
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VQSLOD
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 6.78689160364553e-4
allele num: 10314
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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ReadPosRankSum
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QD
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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ClippingRankSum
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DP
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SIO_000300: 3.601689e6

FS
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 2.88e-1

VQSLOD
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SIO_000300: 3.88e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502855425308085e-5
allele num: 66540
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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South Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
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FS
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
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SIO_000300: 9.25e-1

InbreedingCoeff
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SIO_000300: 2.0e-4

BaseQRankSum
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QD
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ClippingRankSum
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SIO_000300: -1.74e-1

DP
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VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

MQRankSum
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SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
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allele num: 66540
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10320
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East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 1.28e0

ReadPosRankSum
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SIO_000300: 9.25e-1

BaseQRankSum
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SIO_000300: -4.071e0

ClippingRankSum
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VQSLOD
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.193e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503081316699233e-5
allele num: 66530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -6.673e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 8.179999999999999e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.296e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

DP
type: SiteQuality
SIO_000300: 3.599506e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66524
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.043e0

QD
type: SiteQuality
SIO_000300: 1.174e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
type: SiteQuality
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ClippingRankSum
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MQ
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SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 3.599001e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
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African
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allele count: 0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.503623733197005e-5
allele num: 66506
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ClippingRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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