http://identifiers.org/exac.variant/19-58353788-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353788
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353788
    reference: chr 19
allele count: 2
allele frequency: 1.739281676667536e-5
allele num: 114990
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+624A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3271A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13687A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3271A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13687A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1746A>C
  hgvsp: ENSP00000469623.1:p.Glu582Asp
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13684A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1265A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16156A>C
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34955
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15740
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3869
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu582Asp
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

19-58353788-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353788
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353788
    reference: chr 19
allele count: 1
allele frequency: 8.696408383337681e-6
allele num: 114990
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+624A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13684A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1746A>G
  hgvsp: ENST00000594901.1:c.1746A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1265A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13687A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3271A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13687A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3271A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16156A>G
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46724
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu582Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-58353794-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353794
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353794
    reference: chr 19
allele count: 2
allele frequency: 1.742858636735974e-5
allele num: 114754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1271G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1752G>A
  hgvsp: ENST00000594901.1:c.1752G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16150G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3277G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+630G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13678G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3277G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13681G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13681G>A
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3746
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly584Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

19-58353797-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353797
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353797
    reference: chr 19
allele count: 9
allele frequency: 7.839584676225153e-5
allele num: 114802
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1755A>G
  hgvsp: ENST00000594901.1:c.1755A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16147A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13678A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13678A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3280A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3280A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1274A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+633A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13675A>G
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys585Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

19-58353803-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353803
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353803
    reference: chr 19
allele count: 7
allele frequency: 6.105538595726123e-5
allele num: 114650
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1761T>C
  hgvsp: ENST00000594901.1:c.1761T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3286T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1280T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13672T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13672T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+639T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16141T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3286T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13669T>C
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15863
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46710
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3773
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe587Phe
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

19-58353805-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353805
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353805
    reference: chr 19
allele count: 1
allele frequency: 8.731641723276811e-6
allele num: 114526
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13670C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16139C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13667C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3288C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1763C>T
  hgvsp: ENSP00000469623.1:p.Ala588Val
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13670C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1282C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+641C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3288C>T
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala588Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

19-58353806-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353806
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353806
    reference: chr 19
allele count: 1
allele frequency: 8.727526618956187e-6
allele num: 114580
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13669T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1283T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13666T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16138T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1764T>C
  hgvsp: ENST00000594901.1:c.1764T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13669T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3289T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+642T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3289T>C
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala588Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

19-58353806-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353806
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353806
    reference: chr 19
allele count: 2
allele frequency: 1.745505323791237e-5
allele num: 114580
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+642T>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1283T>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3289T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13666T>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1764T>G
  hgvsp: ENST00000594901.1:c.1764T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3289T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13669T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16138T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13669T>G
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala588Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

19-58353808-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353808
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353808
    reference: chr 19
allele count: 1
allele frequency: 8.740036358551252e-6
allele num: 114416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3291G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13667G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13667G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+644G>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1766G>C
  hgvsp: ENSP00000469623.1:p.Gly589Ala
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1285G>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3291G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16136G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13664G>C
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46727
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3710
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly589Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

19-58353811-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353811
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353811
    reference: chr 19
allele count: 2
allele frequency: 1.749689430126153e-5
allele num: 114306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3294T>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3294T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1769T>G
  hgvsp: ENSP00000469623.1:p.Ile590Ser
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13664T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1288T>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13661T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16133T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+647T>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13664T>G
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46495
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3734
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile590Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

19-58353812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353812
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353812
    reference: chr 19
allele count: 1
allele frequency: 8.745998705592191e-6
allele num: 114338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16132C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+648C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13663C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1289C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3295C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3295C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1770C>T
  hgvsp: ENST00000594901.1:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13663C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13660C>T
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile590Ile
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

19-58353819-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353819
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353819
    reference: chr 19
allele count: 25
allele frequency: 2.190139117636752e-4
allele num: 114148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1296C>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3302C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13656C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1777C>G
  hgvsp: ENSP00000469623.1:p.Leu593Val
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13653C>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3302C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16125C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+655C>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13656C>G
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34871
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15941
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47002
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4437
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu593Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/19-58353825-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353825
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353825
    reference: chr 19
allele count: 1
allele frequency: 8.773622979873309e-6
allele num: 113978
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13650A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1783A>C
  hgvsp: ENSP00000469623.1:p.Asn595His
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3308A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+661A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16119A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13650A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1302A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3308A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13647A>C
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15940
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3676
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn595His
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/19-58353826-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353826
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353826
    reference: chr 19
allele count: 1
allele frequency: 8.780864739559551e-6
allele num: 113884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3309A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16118A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1303A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13649A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13649A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1784A>C
  hgvsp: ENSP00000469623.1:p.Asn595Thr
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+662A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3309A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13646A>C
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4656
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3660
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn595Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

19-58353826-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353826
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353826
    reference: chr 19
allele count: 1
allele frequency: 8.780864739559551e-6
allele num: 113884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1784A>G
  hgvsp: ENSP00000469623.1:p.Asn595Ser
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13646A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3309A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16118A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13649A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3309A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+662A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1303A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13649A>G
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46882
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn595Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-58353832-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353832
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353832
    reference: chr 19
allele count: 11
allele frequency: 9.679179205603365e-5
allele num: 113646
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13640G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16112G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13643G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+668G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1309G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1790G>A
  hgvsp: ENSP00000469623.1:p.Arg597Lys
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3315G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3315G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13643G>A
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4849
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg597Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

19-58353837-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353837
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353837
    reference: chr 19
allele count: 1
allele frequency: 8.827683615819209e-6
allele num: 113280
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13635G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16107G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3320G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13638G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3320G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1314G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13638G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1795G>A
  hgvsp: ENSP00000469623.1:p.Val599Ile
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+673G>A
  variant of: http://identifiers.org/hgnc/37142
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val599Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

19-58353837-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353837
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353837
    reference: chr 19
allele count: 1
allele frequency: 8.827683615819209e-6
allele num: 113280
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+673G>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13635G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1795G>C
  hgvsp: ENSP00000469623.1:p.Val599Leu
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16107G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1314G>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3320G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13638G>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3320G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13638G>C
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val599Leu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-58353854-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353854
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353854
    reference: chr 19
allele count: 1
allele frequency: 8.967483903366393e-6
allele num: 111514
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3337G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1331G>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3337G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1812G>C
  hgvsp: ENSP00000469623.1:p.Lys604Asn
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13618G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13621G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13621G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+690G>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16090G>C
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33169
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys604Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-58353860-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353860
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353860
    reference: chr 19
allele count: 1
allele frequency: 9.086943879034603e-6
allele num: 110048
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13612T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13615T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3343T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1818T>C
  hgvsp: ENST00000594901.1:c.1818T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1337T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13615T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3343T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+696T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16084T>C
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7193
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr606Tyr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-58353876-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353876
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353875
    reference: chr 19
allele count: 10
allele frequency: 9.758382450525001e-5
allele num: 102476
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16060delA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3367delA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13591delA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13591delA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+720delA
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1361delA
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3367delA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1842delA
  hgvsp: ENSP00000469623.1:p.Lys614AsnfsTer?
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13588delA
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14055
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27757
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 37381
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10051
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Lys614AsnfsTer?
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
reference allele: GA
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum

19-58353876-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353876
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353876
    reference: chr 19
allele count: 2
allele frequency: 1.951676490105e-5
allele num: 102476
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14055
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37381
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10051
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9986
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6366
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 762
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8834
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP

19-58353876-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353876
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353877
    reference: chr 19
allele count: 6
allele frequency: 5.855029470315001e-5
allele num: 102476
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3367dupA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13591dupA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+720dupA
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16060dupA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1842dupA
  hgvsp: ENSP00000469623.1:p.Phe615IlefsTer2
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3367dupA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13591dupA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13588dupA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1361dupA
  variant of: http://identifiers.org/hgnc/37142
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27757
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14055
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10051
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe615IlefsTer2
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-58353884-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353884
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353884
    reference: chr 19
allele count: 1
allele frequency: 1.0125351855977e-5
allele num: 98762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3367A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13588A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3367A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1361A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+720A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1842A>C
  hgvsp: ENSP00000469623.1:p.Lys614Asn
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13591A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16060A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13591A>C
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35672
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13094
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys614Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

19-58353891-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353891
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353891
    reference: chr 19
allele count: 1
allele frequency: 1.06091790617242e-5
allele num: 94258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16053A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3374A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1368A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13584A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13584A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3374A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1849A>G
  hgvsp: ENSP00000469623.1:p.Lys617Glu
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13581A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+727A>G
  variant of: http://identifiers.org/hgnc/37142
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3041
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys617Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

19-58353902-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353902
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353902
    reference: chr 19
allele count: 1
allele frequency: 1.181055863942364e-5
allele num: 84670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3385A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1379A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3385A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13573A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13570A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+738A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1860A>G
  hgvsp: ENST00000594901.1:c.1860A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13573A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16042A>G
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24293
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20726
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser620Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-58353907-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353907
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353907
    reference: chr 19
allele count: 6
allele frequency: 7.498500299940011e-5
allele num: 80016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1865G>A
  hgvsp: ENSP00000469623.1:p.Arg622His
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13565G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3390G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+743G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16037G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13568G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1384G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3390G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13568G>A
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15384
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16530
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22981
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 1
hgvs: p.Arg622His
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-58353907-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353907
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353907
    reference: chr 19
allele count: 1
allele frequency: 1.249750049990002e-5
allele num: 80016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1384G>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13565G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3390G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1865G>T
  hgvsp: ENSP00000469623.1:p.Arg622Leu
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13568G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16037G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13568G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+743G>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3390G>T
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg622Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-58353925-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353925
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353925
    reference: chr 19
allele count: 2
allele frequency: 2.92201151272536e-5
allele num: 68446
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13550A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1883A>G
  hgvsp: ENSP00000469623.1:p.His628Arg
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3408A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3408A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16019A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1402A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13550A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+761A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13547A>G
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His628Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

19-58353926-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353926
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353927
    reference: chr 19
allele count: 2
allele frequency: 2.952814031772279e-5
allele num: 67732
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16017dupG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3410dupG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1404dupG
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3410dupG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13548dupG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13548dupG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1885dupG
  hgvsp: ENSP00000469623.1:p.Glu629GlyfsTer?
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+763dupG
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13545dupG
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15963
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29015
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6182
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu629GlyfsTer?
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

19-58353936-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353936
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353936
    reference: chr 19
allele count: 2
allele frequency: 3.217710277366626e-5
allele num: 62156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16008G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+772G>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3419G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1413G>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1894G>T
  hgvsp: ENSP00000469623.1:p.Ala632Ser
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3419G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13539G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13536G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13539G>T
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7465
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala632Ser
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

19-58353942-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353942
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353942
    reference: chr 19
allele count: 24
allele frequency: 4.064765259806246e-4
allele num: 59044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13533T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3425T>C
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000469623
  ensembl transcript: ENST00000594901
  gene symbol: ZNF587B
  hgvsc: ENST00000594901.1:c.1900T>C
  hgvsp: ENSP00000469623.1:p.Ter634ArgextTer?
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13530T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+778T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13533T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-16002T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3425T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1419T>C
  variant of: http://identifiers.org/hgnc/37142
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17461
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21276
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6154
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8301
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31004
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 2.5e0
  variant carriers: 1
hgvs: p.Ter634ArgextTer?
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

19-58353945-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353945
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353945
    reference: chr 19
allele count: 1
allele frequency: 1.744957074055978e-5
allele num: 57308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13530G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3428G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3428G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13530G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15999G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+781G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1422G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13527G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17610
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8809
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8743
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

19-58353952-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353952
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353952
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 53056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15992G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3435G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3435G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13520G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1429G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13523G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+788G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13523G>A
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10444
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21569
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10306
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-58353966-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353966
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353966
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 44464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15978T>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3449T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13509T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+802T>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3449T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13506T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1443T>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13509T>G
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21702
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13834
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

19-58353973-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353973
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353973
    reference: chr 19
allele count: 1
allele frequency: 2.465969619254291e-5
allele num: 40552
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1450A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13502A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+809A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13502A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13499A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3456A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3456A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15971A>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14084
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15234
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22388
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

19-58353974-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353974
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353974
    reference: chr 19
allele count: 1
allele frequency: 2.508780732563974e-5
allele num: 39860
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3457T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1451T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13501T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3457T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+810T>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15970T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13498T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13501T>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13862
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4136
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2957
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21717
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-58353983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353983
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353983
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 34408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1460G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13492G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13489G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3466G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13492G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+819G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15961G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3466G>A
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24304
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15865
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15290
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3165
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15744
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-58353985-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353985
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353985
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 33986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1462A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+821A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3468A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13490A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3468A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13487A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15959A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13490A>C
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15926
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24468
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15266
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3163
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-58353987-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353987
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353986
    reference: chr 19
allele count: 1
allele frequency: 3.065040152025992e-5
allele num: 32626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15956delC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13487delC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13484delC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1465delC
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3471delC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+824delC
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13487delC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3471delC
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15942
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14692
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12940
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8466
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: AC
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

19-58353988-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58353988
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58353988
    reference: chr 19
allele count: 1
allele frequency: 3.055114261273371e-5
allele num: 32732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+1465C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+3471C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-13487C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1122+824C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+3471C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-13487C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-13484C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-15956C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10703
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3168
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6381
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP

19-58355607-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355607
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355607
    reference: chr 19
allele count: 1
allele frequency: 1.249063202598052e-4
allele num: 8006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5090G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14337G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5090G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3084G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11865G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11868G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1123-17G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11868G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

19-58355623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355623
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355623
    reference: chr 19
allele count: 1
allele frequency: 1.368363437328955e-4
allele num: 7308
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1123-1C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11849C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5106C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3100C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11852C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14321C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11852C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5106C>T
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1123-1C>T
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

19-58355626-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355626
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355626
    reference: chr 19
allele count: 1
allele frequency: 1.389660922734853e-4
allele num: 7196
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11846T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5109T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5109T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11849T>C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1125T>C
  hgvsp: ENST00000442832.4:c.1125T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11849T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14318T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3103T>C
  variant of: http://identifiers.org/hgnc/37142
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1125T>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

19-58355627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355627
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355627
    reference: chr 19
allele count: 2
allele frequency: 2.829654782116582e-4
allele num: 7068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11848G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11848G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5110G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14317G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3104G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1126G>A
  hgvsp: ENSP00000392410.2:p.Gly376Arg
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5110G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11845G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Gly376Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-58355662-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355662
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355662
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 5304
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11810G>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5145G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5145G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14282G>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1161G>C
  hgvsp: ENSP00000392410.2:p.Lys387Asn
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11813G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3139G>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11813G>C
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys387Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

19-58355678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355678
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355678
    reference: chr 19
allele count: 1
allele frequency: 2.126754572522331e-4
allele num: 4702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11797C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5161C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14266C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11794C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11797C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5161C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3155C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1177C>T
  hgvsp: ENST00000442832.4:c.1177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37142
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3261
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu393Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

19-58355699-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355699
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355699
    reference: chr 19
allele count: 1279
allele frequency: 3.486913849509269e-1
allele num: 3668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14245T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5182T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5182T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11776T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11773T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11776T>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.1198T>C
  hgvsp: ENSP00000392410.2:p.Cys400Arg
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3176T>C
  variant of: http://identifiers.org/hgnc/37142
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 1.25e1
  variant carriers: 843
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 2.5e0
  variant carriers: 250
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 7.5e0
  variant carriers: 1050
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 6.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.25e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 7.5e0
  variant carriers: 119
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 9.75e1
  variant carriers: 848
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 1.75e1
  variant carriers: 189
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 58
hgvs: p.Cys400Arg
num of homozygotes: 196
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

19-58355712-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355712
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355712
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 1510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3189A>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.*2A>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5195A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14232A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11763A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11763A>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5195A>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11760A>T
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3915
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

19-58355728-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355728
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355728
    reference: chr 19
allele count: 1
allele frequency: 5.681818181818182e-3
allele num: 176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11747G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11747G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5211G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11744G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3205G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.*18G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14216G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5211G>A
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4883
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-58355750-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58355750
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58355750
    reference: chr 19
allele count: 1
allele frequency: 3.571428571428571e-2
allele num: 28
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.478+3227C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000392410
  ensembl transcript: ENST00000442832
  gene symbol: ZNF587B
  hgvsc: ENST00000442832.4:c.*40C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-11722C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-11725C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.163+5233C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-11725C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-14194C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-97+5233C>T
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 2.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 7.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 1.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 5
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

19-58361357-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361357
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361357
    reference: chr 19
allele count: 1
allele frequency: 8.510203734277399e-6
allele num: 117506
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6115C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6115C>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.130C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6115C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8587C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.846G>C
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-50C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-50C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6115C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6118C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6118C>G
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

19-58361358-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361358
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361358
    reference: chr 19
allele count: 2
allele frequency: 1.701693184718795e-5
allele num: 117530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6117C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6117C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6114C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-49C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8586C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6114C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.131C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-49C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.845G>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6114C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6114C>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4520
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-58361360-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361360
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361360
    reference: chr 19
allele count: 5
allele frequency: 4.253871022630594e-5
allele num: 117540
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6112C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6115C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6112C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6115C>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-47C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6112C>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-47C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6112C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8584C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.133C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.843G>C
  variant of: http://identifiers.org/hgnc/33258
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7789
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-58361360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361360
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361360
    reference: chr 19
allele count: 2
allele frequency: 1.701548409052238e-5
allele num: 117540
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6112C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.133C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6115C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8584C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6112C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6112C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6115C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.843G>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-47C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6112C>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

19-58361366-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361366
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361366
    reference: chr 19
allele count: 3
allele frequency: 2.550369803621525e-5
allele num: 117630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.837C>T
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.139G>A
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6106G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6109G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8578G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6106G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6106G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6106G>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6109G>A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-41G>A
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-41G>A
  variant of: http://identifiers.org/hgnc/30955
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6980
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8095
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2110
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

19-58361366-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361366
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361366
    reference: chr 19
allele count: 1
allele frequency: 8.501232678738417e-6
allele num: 117630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.139G>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-41G>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6106G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.837C>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6109G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6109G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6106G>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-41G>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6106G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8578G>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6106G>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8095
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6980
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32230
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3388
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

19-58361368-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361368
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361368
    reference: chr 19
allele count: 1
allele frequency: 8.499354049092269e-6
allele num: 117656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6104C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6104C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.835G>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6104C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.141C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6107C>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-39C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6104C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8576C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6107C>T
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-58361371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361371
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361371
    reference: chr 19
allele count: 6427
allele frequency: 5.447441135088403e-2
allele num: 117982
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-36C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6101C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6104C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6101C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-36C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6104C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6101C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.832G>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.144C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6101C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8573C>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 5.25e1
  variant carriers: 652
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 1.25e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 4.25e1
  variant carriers: 543
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.25e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 6582
  bin: 3.25e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 7.25e1
  variant carriers: 331
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 3.75e1
  variant carriers: 460
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 288
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 268
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 639
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 7.5e0
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 4.75e1
  variant carriers: 598
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 6.75e1
  variant carriers: 458
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 6.25e1
  variant carriers: 575
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 8.25e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.75e1
  variant carriers: 182
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.75e1
  variant carriers: 2
num of homozygotes: 245
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-58361373-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361373
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361373
    reference: chr 19
allele count: 2
allele frequency: 1.69296404144376e-5
allele num: 118136
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6102A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6099A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8571A>G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-34A>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.830T>C
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6099A>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.146A>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-34A>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6099A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6102A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6099A>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3240
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

19-58361381-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361381
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361381
    reference: chr 19
allele count: 4
allele frequency: 3.370635027639207e-5
allele num: 118672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.154C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6094C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6091C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6094C>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-26C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6091C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.822G>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6091C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6091C>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8563C>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

19-58361385-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361385
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361385
    reference: chr 19
allele count: 1
allele frequency: 8.39898540256337e-6
allele num: 119062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.818G>C
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-22C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8559C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6087C>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6087C>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.158C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6087C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6090C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6090C>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6087C>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3457
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

19-58361387-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361387
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361387
    reference: chr 19
allele count: 3
allele frequency: 2.515385776331897e-5
allele num: 119266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.816C>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-20G>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6085G>T
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6085G>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-20G>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6085G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6088G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8557G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.160G>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6085G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6088G>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8067
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-58361389-GCTTCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361389
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361384
    reference: chr 19
allele count: 2
allele frequency: 1.674873547047198e-5
allele num: 119412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8553_-122-8549delTTCCC
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-16_-12delTTCCC
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.164_168delTTCCC
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.809_813delGGAAG
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6084_-93-6080delTTCCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6081_479-6077delTTCCC
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6081_-96-6077delTTCCC
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-16_-12delTTCCC
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6081_34-6077delTTCCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6084_34-6080delTTCCC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6081_164-6077delTTCCC
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3306
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: GCTTCC
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

19-58361391-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361391
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361391
    reference: chr 19
allele count: 3
allele frequency: 2.508948583280367e-5
allele num: 119572
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8553T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6081T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6081T>G
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6081T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.812A>C
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-16T>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.164T>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6081T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6084T>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-16T>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6084T>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-58361395-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361395
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361395
    reference: chr 19
allele count: 7
allele frequency: 5.844925769442728e-5
allele num: 119762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.808G>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-12C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-12C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6080C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6077C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.168C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8549C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6080C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6077C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6077C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6077C>T
  variant of: http://identifiers.org/hgnc/37142
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-58361396-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361396
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361396
    reference: chr 19
allele count: 1
allele frequency: 8.346966712296751e-6
allele num: 119804
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-11C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6076C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6079C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6076C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8548C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6079C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.169C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.807G>C
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-11C>G
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6076C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6076C>G
  variant of: http://identifiers.org/hgnc/37142
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8069
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

19-58361396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361396
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361396
    reference: chr 19
allele count: 3
allele frequency: 2.504090013689025e-5
allele num: 119804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.807G>A
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6076C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.169C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6076C>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-11C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8548C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6079C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6079C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-11C>T
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6076C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6076C>T
  variant of: http://identifiers.org/hgnc/37142
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8069
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8920
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-58361398-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361398
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361398
    reference: chr 19
allele count: 9
allele frequency: 7.503376519433746e-5
allele num: 119946
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-9A>C
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-9A>C
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6077A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6074A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6074A>C
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.805T>G
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8546A>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6074A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6077A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.171A>C
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6074A>C
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7801
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8069
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32093
  bin: 9.75e1
  variant carriers: 9
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

19-58361400-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58361400
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58361400
    reference: chr 19
allele count: 94
allele frequency: 7.833072230925635e-4
allele num: 120004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269343
  ensembl protein: ENSP00000350696
  ensembl transcript: ENST00000316462
  gene symbol: ZNF587B
  hgvsc: ENST00000316462.4:c.479-6072T>A
  variant of: http://identifiers.org/hgnc/37142
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000393865
  ensembl transcript: ENST00000423137
  gene symbol: ZNF587
  hgvsc: ENST00000423137.1:c.-7T>A
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000471077
  ensembl transcript: ENST00000598031
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000598031.1:c.34-6072T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000473738
  ensembl transcript: ENST00000603271
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000603271.1:c.34-6075T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198466
  ensembl transcript: ENST00000484707
  gene symbol: ZNF587
  hgvsc: ENST00000484707.1:n.173T>A
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204514
  ensembl transcript: ENST00000597652
  gene symbol: ZNF814
  hgvsc: ENST00000597652.1:n.803A>T
  variant of: http://identifiers.org/hgnc/33258
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472427
  ensembl transcript: ENST00000596498
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000596498.2:c.-93-6075T>A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000198466
  ensembl protein: ENSP00000345479
  ensembl transcript: ENST00000339656
  gene symbol: ZNF587
  hgvsc: ENST00000339656.5:c.-7T>A
  variant of: http://identifiers.org/hgnc/30955
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000472484
  ensembl transcript: ENST00000597134
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000597134.1:c.-96-6072T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000469133
  ensembl transcript: ENST00000593873
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000593873.1:c.-122-8544T>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000268750
  ensembl protein: ENSP00000474684
  ensembl transcript: ENST00000604231
  gene symbol: CTD-2583A14.10
  hgvsc: ENST00000604231.1:c.164-6072T>A
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6085
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 661
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 651
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.745505323791238e-4
allele num: 11458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64742
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.843e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.87e-1

QD
type: SiteQuality
SIO_000300: 1.031e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

DP
type: SiteQuality
SIO_000300: 1.388251e6

VQSLOD
type: SiteQuality
SIO_000300: 6.14e-1

GenotypeQuality
all individuals: 481
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544592382070372e-5
allele num: 64742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.388251e6

FS
type: SiteQuality
SIO_000300: 2.843e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 1.031e1

VQSLOD
type: SiteQuality
SIO_000300: 6.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQRankSum
type: SiteQuality
SIO_000300: -4.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.87e-1

GenotypeQuality
all individuals: 417
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46582
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.835762419683435e-5
allele num: 12762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54640769492469e-5
allele num: 64666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.043e0

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.389479e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 6.62e0

VQSLOD
type: SiteQuality
SIO_000300: -8.199e-1

GenotypeQuality
all individuals: 726
bin: 9.75e1
variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 236
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GenotypeQuality
all individuals: 104
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.050175029171529e-3
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64672
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 1.338e1

VQSLOD
type: SiteQuality
SIO_000300: 4.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

DP
type: SiteQuality
SIO_000300: 1.389549e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 587
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GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.122092006297008e-4
allele num: 11434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12752
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

QD
type: SiteQuality
SIO_000300: 1.235e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

DP
type: SiteQuality
SIO_000300: 1.388796e6

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 779
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GenotypeQuality
all individuals: 3729
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.866582756450598e-5
allele num: 12712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

QD
type: SiteQuality
SIO_000300: 5.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

DP
type: SiteQuality
SIO_000300: 1.389392e6

GenotypeQuality
all individuals: 3744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 788
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GenotypeQuality
all individuals: 178
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.748906386701662e-5
allele num: 11430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12742
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.389046e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e-1

QD
type: SiteQuality
SIO_000300: 1.131e1

FS
type: SiteQuality
SIO_000300: 6.689e0

VQSLOD
type: SiteQuality
SIO_000300: 6.889999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.07e-1

GenotypeQuality
all individuals: 46996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 100
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GenotypeQuality
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GenotypeQuality
all individuals: 178
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GenotypeQuality
all individuals: 238
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GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 719
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.336994624912363e-4
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12742
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.689e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 1.389046e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.889999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.07e-1

QD
type: SiteQuality
SIO_000300: 1.131e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.97e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.878978884336589e-5
allele num: 12692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64498
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.135e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.851e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 5.739e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

DP
type: SiteQuality
SIO_000300: 1.39009e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
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South Asian
type: Population
allele count: 1
allele frequency: 7.896399241945672e-5
allele num: 12664
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.844e1

QD
type: SiteQuality
SIO_000300: 5.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

FS
type: SiteQuality
SIO_000300: 3.784e0

DP
type: SiteQuality
SIO_000300: 1.388178e6

VQSLOD
type: SiteQuality
SIO_000300: -3.424e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551301541993733e-5
allele num: 64462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.164e0

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.388253e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 6.03e0

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 780
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.314866760168303e-3
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12628
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.173708920187793e-3
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.398166847910517e-4
allele num: 64370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.388569e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.52e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
all individuals: 372
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 294
bin: 4.75e1
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GenotypeQuality
all individuals: 4607
bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554919766140067e-5
allele num: 64312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12588
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.386789e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.143e-1

FS
type: SiteQuality
SIO_000300: 2.633e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

QD
type: SiteQuality
SIO_000300: 1.678e1

GenotypeQuality
all individuals: 573
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 132
bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556081165193577e-5
allele num: 64264
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.198e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -7.060999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

DP
type: SiteQuality
SIO_000300: 1.386155e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e0

QD
type: SiteQuality
SIO_000300: 8.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.25e1
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GenotypeQuality
all individuals: 4656
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556081165193577e-5
allele num: 64264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.060999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.386155e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 8.99e0

FS
type: SiteQuality
SIO_000300: 3.198e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 414
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 8.25e1
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GenotypeQuality
all individuals: 156
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GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 4.75e1
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 763
bin: 7.25e1
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GenotypeQuality
all individuals: 724
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 3630
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.25e1
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GenotypeQuality
all individuals: 564
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12532
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.05832549388523e-3
allele num: 8504
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.067397146991937e-4
allele num: 9674
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.028e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

QD
type: SiteQuality
SIO_000300: 1.405e1

FS
type: SiteQuality
SIO_000300: 1.137e0

DP
type: SiteQuality
SIO_000300: 1.385067e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 314
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 361
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 7.25e1
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GenotypeQuality
all individuals: 574
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GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3616
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.813678829543451e-5
allele num: 11346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63942
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.391e1

FS
type: SiteQuality
SIO_000300: 1.218e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 1.379494e6

VQSLOD
type: SiteQuality
SIO_000300: 5.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
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GenotypeQuality
all individuals: 226
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GenotypeQuality
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GenotypeQuality
all individuals: 46775
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GenotypeQuality
all individuals: 716
bin: 9.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 5.75e1
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GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 574
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GenotypeQuality
all individuals: 3616
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.033419023136246e-5
allele num: 12448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63942
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 1.218e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.391e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.379494e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
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GenotypeQuality
all individuals: 45404
bin: 6.25e1
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GenotypeQuality
all individuals: 118
bin: 1.75e1
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GenotypeQuality
all individuals: 684
bin: 7.25e1
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GenotypeQuality
all individuals: 217
bin: 8.25e1
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GenotypeQuality
all individuals: 6422
bin: 2.25e1
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GenotypeQuality
all individuals: 569
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GenotypeQuality
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GenotypeQuality
all individuals: 96
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585087496829825e-5
allele num: 63088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12012
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e0

VQSLOD
type: SiteQuality
SIO_000300: -1.493e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 2.793e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

QD
type: SiteQuality
SIO_000300: 8.98e0

DP
type: SiteQuality
SIO_000300: 1.357022e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.517e0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 391
bin: 5.75e1
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GenotypeQuality
all individuals: 384
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11680
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.212415130940834e-4
allele num: 8248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11100
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.692e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
type: SiteQuality
SIO_000300: 1.261e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 1.33739e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.184e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1

GenotypeQuality
all individuals: 94
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 2.5e0
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GenotypeQuality
all individuals: 965
bin: 3.25e1
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GenotypeQuality
all individuals: 665
bin: 5.75e1
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GenotypeQuality
all individuals: 959
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 365
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 780
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 832
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.025676091490307e-4
allele num: 58498
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.002803925495694e-4
allele num: 9986
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.929384526336099e-4
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.285158e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

QD
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 7.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.4e-2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.418920304967691e-5
allele num: 58498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

QD
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 7.44e-1

DP
type: SiteQuality
SIO_000300: 1.285158e6

GenotypeQuality
all individuals: 454
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 959
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 832
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 37381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.837840609935383e-5
allele num: 58498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.141690229343387e-4
allele num: 6366
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.4e-2

DP
type: SiteQuality
SIO_000300: 1.285158e6

QD
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 7.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

GenotypeQuality
all individuals: 708
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 607
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7376
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e0

QD
type: SiteQuality
SIO_000300: 1.364e1

DP
type: SiteQuality
SIO_000300: 1.202175e6

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15607
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32434
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

QD
type: SiteQuality
SIO_000300: 1.638e1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.13944e6

GenotypeQuality
all individuals: 150
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4075
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 302
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.040649742878132e-5
allele num: 49004
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6194
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.026e0

MQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.495e-1

QD
type: SiteQuality
SIO_000300: 7.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

DP
type: SiteQuality
SIO_000300: 1.011564e6

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 459
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4547
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20215
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 6.791632708503124e-4
allele num: 7362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.154336679736309e-5
allele num: 46418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.678e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.92e0

DP
type: SiteQuality
SIO_000300: 9.51556e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

GenotypeQuality
all individuals: 799
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20215
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22981
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4547
bin: 7.5e0
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GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6726
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.358326541700625e-4
allele num: 7362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

QD
type: SiteQuality
SIO_000300: 9.92e0

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.678e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 9.51556e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

GenotypeQuality
all individuals: 91
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6073
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2552
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12541
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
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GenotypeQuality
all individuals: 82
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GenotypeQuality
all individuals: 28846
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2853
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variant carriers: 0

GenotypeQuality
all individuals: 543
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variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.741553465691397e-4
allele num: 5742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.509914160935696e-5
allele num: 39842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.01509e5

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.61e-1

QD
type: SiteQuality
SIO_000300: 1.25e1

FS
type: SiteQuality
SIO_000300: 2.058e0

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 502
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
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variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 226
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.067139599695971e-5
allele num: 39470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6108
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.018e1

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.036e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.14e-2

QD
type: SiteQuality
SIO_000300: 1.793e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.435e0

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

DP
type: SiteQuality
SIO_000300: 7.93585e5

GenotypeQuality
all individuals: 496
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 3.355704697986577e-4
allele num: 5960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36392
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.943e0

DP
type: SiteQuality
SIO_000300: 7.32402e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.39e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

FS
type: SiteQuality
SIO_000300: 6.101e0

QD
type: SiteQuality
SIO_000300: 1.278e1

MQRankSum
type: SiteQuality
SIO_000300: 9.51e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 24

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.34192037470726e-4
allele num: 4270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 6.65470748220589e-4
allele num: 34562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4968
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

QD
type: SiteQuality
SIO_000300: 1.262e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.007e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.51e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.658e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

DP
type: SiteQuality
SIO_000300: 6.96331e5

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6735
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.97849526419253e-5
allele num: 33574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4824
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.466e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.73e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.408e0

DP
type: SiteQuality
SIO_000300: 6.80924e5

GenotypeQuality
all individuals: 1508
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1275
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GenotypeQuality
all individuals: 4993
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3380
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.37453e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.96e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.516e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.826000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
all individuals: 2181
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3139
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variant carriers: 0

GenotypeQuality
all individuals: 3420
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variant carriers: 0

GenotypeQuality
all individuals: 1240
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2686
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.51e0

VQSLOD
type: SiteQuality
SIO_000300: 3.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.62e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.63677e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.1e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 116
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.194982800570518e-5
allele num: 23838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3232
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.221e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.91e-2

QD
type: SiteQuality
SIO_000300: 1.048e1

MQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 5.33864e5

VQSLOD
type: SiteQuality
SIO_000300: -6.294999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.265847623922873e-5
allele num: 23442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.805e1

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

DP
type: SiteQuality
SIO_000300: 5.3002e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.99e-2

QD
type: SiteQuality
SIO_000300: 1.245e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

VQSLOD
type: SiteQuality
SIO_000300: -1.542e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 139
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2192
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1870
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.01422e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.27e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1542
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 20048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2788
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.99892e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 5.187260089220873e-5
allele num: 19278
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 2664
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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FS
type: SiteQuality
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DP
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VQSLOD
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BaseQRankSum
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SIO_000300: 7.02e-1

MQRankSum
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SIO_000300: -3.72e-1

ReadPosRankSum
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ClippingRankSum
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SIO_000300: -7.84e-1

InbreedingCoeff
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SIO_000300: -3.44e-2

MQ
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SIO_000300: 5.777e1

QD
type: SiteQuality
SIO_000300: 1.634e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 3652
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 5.167424555601488e-5
allele num: 19352
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.97244e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 1.219512195121951e-2
allele num: 82
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 1984
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5546
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African
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allele frequency: 0.0e0
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Other
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QD
type: SiteQuality
SIO_000300: 8.789999999999999e0

BaseQRankSum
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SIO_000300: -2.835e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.72e-2

DP
type: SiteQuality
SIO_000300: 8.8493e4

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

FS
type: SiteQuality
SIO_000300: 4.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.94e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

VQSLOD
type: SiteQuality
SIO_000300: -1.657e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.43e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1832
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South Asian
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allele frequency: 1.987281399046105e-4
allele num: 5032
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MQ
type: SiteQuality
SIO_000300: 5.662e1

VQSLOD
type: SiteQuality
SIO_000300: -7.103e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
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SIO_000300: 7.9286e4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.88e-2

FS
type: SiteQuality
SIO_000300: 1.485e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 9.31e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1800
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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Other
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 1
allele frequency: 2.016129032258065e-4
allele num: 4960
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MQRankSum
type: SiteQuality
SIO_000300: -8.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.79e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.74e-1

FS
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SIO_000300: 2.077e0

MQ
type: SiteQuality
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DP
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BaseQRankSum
type: SiteQuality
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QD
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SIO_000300: 2.94e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1768
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African
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allele frequency: 0.0e0
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South Asian
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allele count: 2
allele frequency: 4.108463434675431e-4
allele num: 4868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

East Asian
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VQSLOD
type: SiteQuality
SIO_000300: -3.987e-1

MQRankSum
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DP
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.88e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: NaN
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: NaN
allele num: 0
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South Asian
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Other
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African
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East Asian
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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FS
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BaseQRankSum
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QD
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MQ
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GenotypeQuality
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variant carriers: 36

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 85

European (Finnish)
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African
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allele frequency: 6.041666666666666e-1
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Latino
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Other
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East Asian
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European (Non-Finnish)
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allele num: 896
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South Asian
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allele frequency: 2.875e-1
allele num: 2480
num of homozygotes: 80

ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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FS
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VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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FS
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QD
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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South Asian
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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FS
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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South Asian
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MQ
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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East Asian
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QD
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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FS
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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South Asian
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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BaseQRankSum
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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ClippingRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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African
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South Asian
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Other
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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East Asian
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South Asian
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African
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ReadPosRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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MQRankSum
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VQSLOD
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QD
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SIO_000300: 1.091e1

MQ
type: SiteQuality
SIO_000300: 4.584e1

GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3458
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32234
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3392
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3176
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.055966209081309e-4
allele num: 9470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.497836e6

MQ
type: SiteQuality
SIO_000300: 3.748e1

VQSLOD
type: SiteQuality
SIO_000300: -3.346e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

FS
type: SiteQuality
SIO_000300: 6.264e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 3.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 3169
bin: 9.25e1
variant carriers: 19

GenotypeQuality
all individuals: 553
bin: 3.25e1
variant carriers: 7

GenotypeQuality
all individuals: 386
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3033
bin: 6.75e1
variant carriers: 15

GenotypeQuality
all individuals: 479
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 83
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3111
bin: 8.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1945
bin: 8.75e1
variant carriers: 19

GenotypeQuality
all individuals: 232
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1772
bin: 7.25e1
variant carriers: 14

GenotypeQuality
all individuals: 1589
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 34560
bin: 9.75e1
variant carriers: 6065

GenotypeQuality
all individuals: 2915
bin: 7.75e1
variant carriers: 17

GenotypeQuality
all individuals: 6163
bin: 6.25e1
variant carriers: 12

European (Finnish)
type: Population
allele count: 295
allele frequency: 4.620927318295739e-2
allele num: 6384
num of homozygotes: 7

African
type: Population
allele count: 132
allele frequency: 1.384228187919463e-2
allele num: 9536
num of homozygotes: 1

Other
type: Population
allele count: 37
allele frequency: 4.262672811059908e-2
allele num: 868
num of homozygotes: 1

South Asian
type: Population
allele count: 568
allele frequency: 3.444094106233325e-2
allele num: 16492
num of homozygotes: 15

East Asian
type: Population
allele count: 1
allele frequency: 1.164415463437354e-4
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4965
allele frequency: 7.681240137380488e-2
allele num: 64638
num of homozygotes: 213

Latino
type: Population
allele count: 429
allele frequency: 3.738236319275009e-2
allele num: 11476
num of homozygotes: 8

FS
type: SiteQuality
SIO_000300: 6.17e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

MQ
type: SiteQuality
SIO_000300: 4.588e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.43e-2

DP
type: SiteQuality
SIO_000300: 2.57569e6

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.886e0

VQSLOD
type: SiteQuality
SIO_000300: -1.342e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

GenotypeQuality
all individuals: 7008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32077
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

FS
type: SiteQuality
SIO_000300: 4.319e0

VQSLOD
type: SiteQuality
SIO_000300: -1.86e0

QD
type: SiteQuality
SIO_000300: 9.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 2.52905e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.97e-1

MQ
type: SiteQuality
SIO_000300: 4.825e1

GenotypeQuality
all individuals: 341
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32083
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7893
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3443
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3485
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.611553478648508e-5
allele num: 65054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.751e0

DP
type: SiteQuality
SIO_000300: 2.541351e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 5.576e0

MQRankSum
type: SiteQuality
SIO_000300: 7.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.31e-1

MQ
type: SiteQuality
SIO_000300: 4.637e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

QD
type: SiteQuality
SIO_000300: 1.221e1

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32087
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8171
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3546
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3296
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.006e1

MQ
type: SiteQuality
SIO_000300: 5.296e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.94e-1

FS
type: SiteQuality
SIO_000300: 2.334e0

VQSLOD
type: SiteQuality
SIO_000300: -1.163e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

DP
type: SiteQuality
SIO_000300: 2.547692e6

MQRankSum
type: SiteQuality
SIO_000300: -1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.35e-1

GenotypeQuality
all individuals: 2017
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32090
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8497
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.738525730180807e-4
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529005229197884e-5
allele num: 65402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.551021e6

VQSLOD
type: SiteQuality
SIO_000300: -1.451e0

MQRankSum
type: SiteQuality
SIO_000300: 9.87e-1

QD
type: SiteQuality
SIO_000300: 2.195e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.56e-1

FS
type: SiteQuality
SIO_000300: 2.965e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

MQ
type: SiteQuality
SIO_000300: 5.006e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
all individuals: 222
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3549
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8612
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32092
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.053901358986105e-5
allele num: 65490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.553472e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.381e0

MQ
type: SiteQuality
SIO_000300: 4.876e1

FS
type: SiteQuality
SIO_000300: 6.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 3.6e0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.355e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.38e-1

GenotypeQuality
all individuals: 206
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32091
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.022974607013301e-4
allele num: 9924
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-1

DP
type: SiteQuality
SIO_000300: 2.555263e6

VQSLOD
type: SiteQuality
SIO_000300: -1.569e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.666e0

MQ
type: SiteQuality
SIO_000300: 4.926e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.95e-1

QD
type: SiteQuality
SIO_000300: 1.219e1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8827
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32091
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.06544901065449e-4
allele num: 65700
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.542e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQ
type: SiteQuality
SIO_000300: 5.219e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.237e1

DP
type: SiteQuality
SIO_000300: 2.558208e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.394e0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8920
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3317
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32091
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9970
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -7.179e-1

DP
type: SiteQuality
SIO_000300: 2.558727e6

QD
type: SiteQuality
SIO_000300: 1.048e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.787e0

FS
type: SiteQuality
SIO_000300: 5.151e0

MQ
type: SiteQuality
SIO_000300: 5.09e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3317
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32091
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.003009027081244e-4
allele num: 9970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.042935824483462e-5
allele num: 65726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.151e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQ
type: SiteQuality
SIO_000300: 5.09e1

QD
type: SiteQuality
SIO_000300: 1.048e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.179e-1

DP
type: SiteQuality
SIO_000300: 2.558727e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.787e0

GenotypeQuality
all individuals: 3473
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3663
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.215399106681657e-4
allele num: 65822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.137e1

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

DP
type: SiteQuality
SIO_000300: 2.560513e6

VQSLOD
type: SiteQuality
SIO_000300: -3.943e-1

MQ
type: SiteQuality
SIO_000300: 5.049e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1