17-18872706-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872706
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872706
    reference: chr 17
allele count: 1
allele frequency: 8.321405984755183e-6
allele num: 120172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+236T>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1966A>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+236T>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.611T>C
  hgvsp: ENSP00000379007.3:p.Val204Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.611T>C
  hgvsp: ENSP00000401875.2:p.Val204Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.611T>C
  hgvsp: ENSP00000379008.2:p.Val204Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+236T>C
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14992
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val204Ala
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

17-18872708-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872708
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872708
    reference: chr 17
allele count: 1
allele frequency: 8.321129010784183e-6
allele num: 120176
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1964C>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.613G>T
  hgvsp: ENSP00000401875.2:p.Val205Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.613G>T
  hgvsp: ENSP00000379008.2:p.Val205Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.613G>T
  hgvsp: ENSP00000379007.3:p.Val205Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+238G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+238G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+238G>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19945
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val205Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

17-18872715-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872715
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872715
    reference: chr 17
allele count: 1
allele frequency: 8.326949338840222e-6
allele num: 120092
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.620C>T
  hgvsp: ENSP00000379008.2:p.Ala207Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.620C>T
  hgvsp: ENSP00000401875.2:p.Ala207Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.620C>T
  hgvsp: ENSP00000379007.3:p.Ala207Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+245C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1957G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+245C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+245C>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14992
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2231
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3385
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala207Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-18872721-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872721
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872721
    reference: chr 17
allele count: 4
allele frequency: 3.33205604518268e-5
allele num: 120046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.626T>A
  hgvsp: ENSP00000401875.2:p.Ile209Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.626T>A
  hgvsp: ENSP00000379008.2:p.Ile209Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+251T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.626T>A
  hgvsp: ENSP00000379007.3:p.Ile209Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+251T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+251T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1951A>T
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3375
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile209Asn
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

17-18872725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872725
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872725
    reference: chr 17
allele count: 1
allele frequency: 8.333888925928395e-6
allele num: 119992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.630G>A
  hgvsp: ENST00000417251.2:c.630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.630G>A
  hgvsp: ENST00000395647.2:c.630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+255G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+255G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+255G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1947C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.630G>A
  hgvsp: ENST00000395645.3:c.630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4756
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu210Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

17-18872738-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872738
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872738
    reference: chr 17
allele count: 6
allele frequency: 5.011777677542225e-5
allele num: 119718
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+3G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+3G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+268G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+3G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+268G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+268G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1934C>T
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6928
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
hgvs: c.640+3G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/17-18872743-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872743
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872743
    reference: chr 17
allele count: 1
allele frequency: 8.365540664893172e-6
allele num: 119538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+8C>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+273C>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1929G>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+8C>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+273C>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+8C>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+273C>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18462
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14997
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6853
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
hgvs: c.640+8C>A
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

17-18872743-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872743
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872741
    reference: chr 17
allele count: 19
allele frequency: 1.589452726329703e-4
allele num: 119538
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+11_640+12delAG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+276_391+277delAG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+11_640+12delAG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+276_559+277delAG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1927_*1928delCT
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+276_391+277delAG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+11_640+12delAG
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6853
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18462
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: CAG
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

17-18872747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872747
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872747
    reference: chr 17
allele count: 1
allele frequency: 8.37058242512514e-6
allele num: 119466
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+277G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+277G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1925C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+12G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+12G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+277G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+12G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4725
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6848
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18010
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

17-18872754-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872754
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872754
    reference: chr 17
allele count: 1
allele frequency: 8.391232839928842e-6
allele num: 119172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+19G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+19G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1918C>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+284G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+284G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+19G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+284G>C
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14987
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3318
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-18872760-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872760
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872760
    reference: chr 17
allele count: 2
allele frequency: 1.680220444922374e-5
allele num: 119032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+25G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1912C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+290G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+25G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+290G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+290G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+25G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13293
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4706
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14987
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2228
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

17-18872762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872762
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872762
    reference: chr 17
allele count: 3
allele frequency: 2.522110502068131e-5
allele num: 118948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+27G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+292G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1910C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+27G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+292G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+27G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+292G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11473
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4678
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6560
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15621
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

17-18872778-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872778
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872778
    reference: chr 17
allele count: 1
allele frequency: 8.468260957929679e-6
allele num: 118088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+43C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+43C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+308C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+43C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+308C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+308C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1894G>A
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4069
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14963
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

17-18872779-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18872779
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18872779
    reference: chr 17
allele count: 5
allele frequency: 4.235062933035185e-5
allele num: 118062
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.640+44G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.559+309G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.640+44G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*1893C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.391+309G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.391+309G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.640+44G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10515
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5463
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4067
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14964
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

17-18874278-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874278
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874278
    reference: chr 17
allele count: 3
allele frequency: 2.540951671099216e-5
allele num: 118066
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*394C>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-48G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-48G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-48G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-48G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-48G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-48G>C
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14997
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9082
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7384
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3677
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4830
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3895
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7163
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2531
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

17-18874284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874284
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874284
    reference: chr 17
allele count: 1
allele frequency: 8.443521286117163e-6
allele num: 118434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-42C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-42C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-42C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-42C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*388G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-42C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-42C>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3886
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7794
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7445
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

17-18874296-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874296
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874296
    reference: chr 17
allele count: 2
allele frequency: 1.675350567106167e-5
allele num: 119378
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-30A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-30A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-30A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-30A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*376T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-30A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-30A>G
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21159
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7629
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4279
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-18874298-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874298
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874298
    reference: chr 17
allele count: 2
allele frequency: 1.673864283083927e-5
allele num: 119484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*374A>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-28T>G
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11122
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8772
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7631
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5542
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-18874299-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874299
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874299
    reference: chr 17
allele count: 2
allele frequency: 1.673024158468848e-5
allele num: 119544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-27G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-27G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-27G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-27G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*373C>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-27G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-27G>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11162
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

17-18874309-CACCCTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874309
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874303
    reference: chr 17
allele count: 11
allele frequency: 9.164222873900293e-5
allele num: 120032
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-12_392-7delTGACCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-12_560-7delTGACCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-12_392-7delTGACCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-12_641-7delTGACCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*357_*362delCAGGGT
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-12_641-7delTGACCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-12_641-7delTGACCC
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16041
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21336
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5673
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4593
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: CACCCTG
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

17-18874312-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874312
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874312
    reference: chr 17
allele count: 1
allele frequency: 8.324176738920521e-6
allele num: 120132
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-14C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-14C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*360G>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-14C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-14C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-14C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-14C>G
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7690
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4472
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21992
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

17-18874320-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874320
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874320
    reference: chr 17
allele count: 20
allele frequency: 1.660964023519251e-4
allele num: 120412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-6C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-6C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-6C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*352G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-6C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-6C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-6C>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16340
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21297
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11676
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4671
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9148
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7725
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: c.641-6C>T
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

17-18874321-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874321
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874321
    reference: chr 17
allele count: 1
allele frequency: 8.304820117596252e-6
allele num: 120412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-5T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-5T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*351A>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-5T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-5T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-5T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-5T>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4675
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5745
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7745
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: c.641-5T>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

17-18874321-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874321
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874321
    reference: chr 17
allele count: 1
allele frequency: 8.304820117596252e-6
allele num: 120412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-5T>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-5T>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-5T>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-5T>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-5T>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*351A>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-5T>C
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21268
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 9.25e1
  variant carriers: 0
hgvs: c.641-5T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum

17-18874321-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874321
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874321
    reference: chr 17
allele count: 26
allele frequency: 2.159253230575026e-4
allele num: 120412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641-5T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560-5T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392-5T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392-5T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*351A>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641-5T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641-5T>G
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21268
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11700
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16347
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4532
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9149
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
hgvs: c.641-5T>G
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD

17-18874326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874326
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874326
    reference: chr 17
allele count: 1
allele frequency: 8.296414289743973e-6
allele num: 120534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.392C>T
  hgvsp: ENSP00000379004.1:p.Ala131Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.641C>T
  hgvsp: ENSP00000379008.2:p.Ala214Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.392C>T
  hgvsp: ENSP00000324346.6:p.Ala131Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.560C>T
  hgvsp: ENSP00000379005.2:p.Ala187Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.641C>T
  hgvsp: ENSP00000401875.2:p.Ala214Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*346G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.641C>T
  hgvsp: ENSP00000379007.3:p.Ala214Val
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4537
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9183
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala214Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-18874334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874334
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874334
    reference: chr 17
allele count: 7
allele frequency: 5.804119266359325e-5
allele num: 120604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.400C>T
  hgvsp: ENSP00000324346.6:p.Gln134Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.400C>T
  hgvsp: ENSP00000379004.1:p.Gln134Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*338G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.649C>T
  hgvsp: ENSP00000379008.2:p.Gln217Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.649C>T
  hgvsp: ENSP00000401875.2:p.Gln217Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.649C>T
  hgvsp: ENSP00000379007.3:p.Gln217Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.568C>T
  hgvsp: ENSP00000379005.2:p.Gln190Ter
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2291
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22256
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4692
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4570
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln217Ter
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP

17-18874336-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874336
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874336
    reference: chr 17
allele count: 2
allele frequency: 1.657715005636231e-5
allele num: 120648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.651G>A
  hgvsp: ENST00000395645.3:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.570G>A
  hgvsp: ENST00000395643.2:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.651G>A
  hgvsp: ENST00000395647.2:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.402G>A
  hgvsp: ENST00000317977.6:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.402G>A
  hgvsp: ENST00000395642.1:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*336C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.651G>A
  hgvsp: ENST00000417251.2:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5784
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4687
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4568
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln217Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum

17-18874336-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874336
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874336
    reference: chr 17
allele count: 1
allele frequency: 8.288575028181154e-6
allele num: 120648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.402G>C
  hgvsp: ENSP00000324346.6:p.Gln134His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.402G>C
  hgvsp: ENSP00000379004.1:p.Gln134His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*336C>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.570G>C
  hgvsp: ENSP00000379005.2:p.Gln190His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.651G>C
  hgvsp: ENSP00000379007.3:p.Gln217His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.651G>C
  hgvsp: ENSP00000379008.2:p.Gln217His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.651G>C
  hgvsp: ENSP00000401875.2:p.Gln217His
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5784
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln217His
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-18874339-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874339
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874339
    reference: chr 17
allele count: 1
allele frequency: 8.288575028181154e-6
allele num: 120648
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.405C>G
  hgvsp: ENSP00000324346.6:p.Ile135Met
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.573C>G
  hgvsp: ENSP00000379005.2:p.Ile191Met
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.654C>G
  hgvsp: ENSP00000379008.2:p.Ile218Met
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.654C>G
  hgvsp: ENSP00000401875.2:p.Ile218Met
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.654C>G
  hgvsp: ENSP00000379007.3:p.Ile218Met
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.405C>G
  hgvsp: ENSP00000379004.1:p.Ile135Met
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*333G>C
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5790
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22042
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile218Met
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-18874339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874339
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874339
    reference: chr 17
allele count: 11
allele frequency: 9.117432530999271e-5
allele num: 120648
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.654C>T
  hgvsp: ENST00000395647.2:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.405C>T
  hgvsp: ENST00000317977.6:c.405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.654C>T
  hgvsp: ENST00000395645.3:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.405C>T
  hgvsp: ENST00000395642.1:c.405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.573C>T
  hgvsp: ENST00000395643.2:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*333G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.654C>T
  hgvsp: ENST00000417251.2:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11872
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9194
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile218Ile
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

17-18874340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874340
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874340
    reference: chr 17
allele count: 6
allele frequency: 4.973062577704103e-5
allele num: 120650
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*332C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.574G>A
  hgvsp: ENSP00000379005.2:p.Gly192Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.406G>A
  hgvsp: ENSP00000324346.6:p.Gly136Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.406G>A
  hgvsp: ENSP00000379004.1:p.Gly136Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.655G>A
  hgvsp: ENSP00000379007.3:p.Gly219Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.655G>A
  hgvsp: ENSP00000379008.2:p.Gly219Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.655G>A
  hgvsp: ENSP00000401875.2:p.Gly219Ser
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7766
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5789
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4691
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly219Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

17-18874348-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874348
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874348
    reference: chr 17
allele count: 2
allele frequency: 1.656836105772417e-5
allele num: 120712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.663C>T
  hgvsp: ENST00000395645.3:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*324G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.414C>T
  hgvsp: ENST00000317977.6:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.414C>T
  hgvsp: ENST00000395642.1:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.663C>T
  hgvsp: ENST00000395647.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.582C>T
  hgvsp: ENST00000395643.2:c.582C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.663C>T
  hgvsp: ENST00000417251.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7764
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9204
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr221Tyr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

17-18874349-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874349
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874349
    reference: chr 17
allele count: 3
allele frequency: 2.485130635033715e-5
allele num: 120718
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.664G>A
  hgvsp: ENSP00000401875.2:p.Gly222Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*323C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.664G>A
  hgvsp: ENSP00000379008.2:p.Gly222Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.664G>A
  hgvsp: ENSP00000379007.3:p.Gly222Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.583G>A
  hgvsp: ENSP00000379005.2:p.Gly195Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.415G>A
  hgvsp: ENSP00000379004.1:p.Gly139Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.415G>A
  hgvsp: ENSP00000324346.6:p.Gly139Arg
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5407
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4564
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9211
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly222Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

17-18874358-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874358
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874358
    reference: chr 17
allele count: 1
allele frequency: 8.280064915708939e-6
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.673G>A
  hgvsp: ENSP00000379007.3:p.Glu225Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.424G>A
  hgvsp: ENSP00000379004.1:p.Glu142Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.673G>A
  hgvsp: ENSP00000379008.2:p.Glu225Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*314C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.592G>A
  hgvsp: ENSP00000379005.2:p.Glu198Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.673G>A
  hgvsp: ENSP00000401875.2:p.Glu225Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.424G>A
  hgvsp: ENSP00000324346.6:p.Glu142Lys
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu225Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

17-18874367-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874367
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874367
    reference: chr 17
allele count: 10
allele frequency: 8.277186418792524e-5
allele num: 120814
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*305A>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.433T>G
  hgvsp: ENSP00000379004.1:p.Tyr145Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.601T>G
  hgvsp: ENSP00000379005.2:p.Tyr201Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.682T>G
  hgvsp: ENSP00000379007.3:p.Tyr228Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.682T>G
  hgvsp: ENSP00000401875.2:p.Tyr228Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.682T>G
  hgvsp: ENSP00000379008.2:p.Tyr228Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.433T>G
  hgvsp: ENSP00000324346.6:p.Tyr145Asp
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22189
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9210
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr228Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

17-18874369-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874369
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874369
    reference: chr 17
allele count: 9
allele frequency: 7.447618417132833e-5
allele num: 120844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.603C>T
  hgvsp: ENST00000395643.2:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.684C>T
  hgvsp: ENST00000395647.2:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.435C>T
  hgvsp: ENST00000317977.6:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.435C>T
  hgvsp: ENST00000395642.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.684C>T
  hgvsp: ENST00000395645.3:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.684C>T
  hgvsp: ENST00000417251.2:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*303G>A
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9224
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22213
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr228Tyr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

17-18874370-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874370
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874370
    reference: chr 17
allele count: 1
allele frequency: 8.275131574592036e-6
allele num: 120844
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.685G>A
  hgvsp: ENSP00000379008.2:p.Ala229Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.685G>A
  hgvsp: ENSP00000379007.3:p.Ala229Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.436G>A
  hgvsp: ENSP00000324346.6:p.Ala146Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.436G>A
  hgvsp: ENSP00000379004.1:p.Ala146Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.604G>A
  hgvsp: ENSP00000379005.2:p.Ala202Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.685G>A
  hgvsp: ENSP00000401875.2:p.Ala229Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*302C>T
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2951
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4703
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5796
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala229Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

17-18874377-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874377
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874377
    reference: chr 17
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.443C>T
  hgvsp: ENSP00000379004.1:p.Ala148Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*295G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.443C>T
  hgvsp: ENSP00000324346.6:p.Ala148Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.692C>T
  hgvsp: ENSP00000379008.2:p.Ala231Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.692C>T
  hgvsp: ENSP00000401875.2:p.Ala231Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.692C>T
  hgvsp: ENSP00000379007.3:p.Ala231Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.611C>T
  hgvsp: ENSP00000379005.2:p.Ala204Val
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4706
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22359
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala231Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

17-18874379-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874379
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874379
    reference: chr 17
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*293T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.445A>G
  hgvsp: ENSP00000324346.6:p.Ile149Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.694A>G
  hgvsp: ENSP00000401875.2:p.Ile232Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.694A>G
  hgvsp: ENSP00000379007.3:p.Ile232Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.445A>G
  hgvsp: ENSP00000379004.1:p.Ile149Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.694A>G
  hgvsp: ENSP00000379008.2:p.Ile232Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.613A>G
  hgvsp: ENSP00000379005.2:p.Ile205Val
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7784
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile232Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

17-18874395-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874395
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874395
    reference: chr 17
allele count: 3
allele frequency: 2.479543763947434e-5
allele num: 120990
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*277A>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.710T>C
  hgvsp: ENSP00000379008.2:p.Ile237Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.629T>C
  hgvsp: ENSP00000379005.2:p.Ile210Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.710T>C
  hgvsp: ENSP00000379007.3:p.Ile237Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*277A>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.461T>C
  hgvsp: ENSP00000379004.1:p.Ile154Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*277A>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.710T>C
  hgvsp: ENSP00000401875.2:p.Ile237Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.461T>C
  hgvsp: ENSP00000324346.6:p.Ile154Thr
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9340
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile237Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

17-18874398-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874398
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874398
    reference: chr 17
allele count: 2
allele frequency: 1.653029175964956e-5
allele num: 120990
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*274G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.713C>T
  hgvsp: ENSP00000401875.2:p.Ala238Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.632C>T
  hgvsp: ENSP00000379005.2:p.Ala211Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*274G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.713C>T
  hgvsp: ENSP00000379008.2:p.Ala238Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.713C>T
  hgvsp: ENSP00000379007.3:p.Ala238Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.464C>T
  hgvsp: ENSP00000324346.6:p.Ala155Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.464C>T
  hgvsp: ENSP00000379004.1:p.Ala155Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*274G>A
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7790
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ala238Val
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

17-18874401-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874401
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874401
    reference: chr 17
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.716A>T
  hgvsp: ENSP00000379007.3:p.Asn239Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*271T>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*271T>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.467A>T
  hgvsp: ENSP00000379004.1:p.Asn156Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.635A>T
  hgvsp: ENSP00000379005.2:p.Asn212Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.716A>T
  hgvsp: ENSP00000379008.2:p.Asn239Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.467A>T
  hgvsp: ENSP00000324346.6:p.Asn156Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.716A>T
  hgvsp: ENSP00000401875.2:p.Asn239Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*271T>A
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4718
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn239Ile
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

17-18874402-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874402
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874402
    reference: chr 17
allele count: 2
allele frequency: 1.652674026574998e-5
allele num: 121016
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.717C>T
  hgvsp: ENST00000395647.2:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.468C>T
  hgvsp: ENST00000317977.6:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.717C>T
  hgvsp: ENST00000395645.3:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*270G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*270G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.468C>T
  hgvsp: ENST00000395642.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.717C>T
  hgvsp: ENST00000417251.2:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*270G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.636C>T
  hgvsp: ENST00000395643.2:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5829
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn239Asn
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

17-18874403-ACCACCTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874403
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874396
    reference: chr 17
allele count: 2
allele frequency: 1.652919882973272e-5
allele num: 120998
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.730_736delCTGCCAC
  hgvsp: ENSP00000379008.2:p.Leu244ValfsTer21
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*262_*268delCAGGTGG
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.481_487delCTGCCAC
  hgvsp: ENSP00000379004.1:p.Leu161ValfsTer21
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*262_*268delCAGGTGG
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.481_487delCTGCCAC
  hgvsp: ENSP00000324346.6:p.Leu161ValfsTer21
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.649_655delCTGCCAC
  hgvsp: ENSP00000379005.2:p.Leu217ValfsTer21
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.730_736delCTGCCAC
  hgvsp: ENSP00000379007.3:p.Leu244ValfsTer21
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*262_*268delCAGGTGG
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.730_736delCTGCCAC
  hgvsp: ENSP00000401875.2:p.Leu244ValfsTer21
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu244ValfsTer21
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: ACCACCTG
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

17-18874409-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874409
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874409
    reference: chr 17
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*263A>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.475T>A
  hgvsp: ENSP00000324346.6:p.Cys159Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*263A>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.643T>A
  hgvsp: ENSP00000379005.2:p.Cys215Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.724T>A
  hgvsp: ENSP00000379007.3:p.Cys242Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.475T>A
  hgvsp: ENSP00000379004.1:p.Cys159Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.724T>A
  hgvsp: ENSP00000379008.2:p.Cys242Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.724T>A
  hgvsp: ENSP00000401875.2:p.Cys242Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*263A>T
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys242Ser
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

17-18874410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874410
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874410
    reference: chr 17
allele count: 2
allele frequency: 1.65264671371201e-5
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*262C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.476G>A
  hgvsp: ENSP00000379004.1:p.Cys159Tyr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.725G>A
  hgvsp: ENSP00000379008.2:p.Cys242Tyr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.725G>A
  hgvsp: ENSP00000401875.2:p.Cys242Tyr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.476G>A
  hgvsp: ENSP00000324346.6:p.Cys159Tyr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.644G>A
  hgvsp: ENSP00000379005.2:p.Cys215Tyr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*262C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*262C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.725G>A
  hgvsp: ENSP00000379007.3:p.Cys242Tyr
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22460
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Cys242Tyr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/17-18874412-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874412
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874412
    reference: chr 17
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.646C>A
  hgvsp: ENSP00000379005.2:p.His216Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*260G>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.478C>A
  hgvsp: ENSP00000379004.1:p.His160Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.727C>A
  hgvsp: ENSP00000379007.3:p.His243Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.727C>A
  hgvsp: ENSP00000379008.2:p.His243Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.478C>A
  hgvsp: ENSP00000324346.6:p.His160Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.727C>A
  hgvsp: ENSP00000401875.2:p.His243Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*260G>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*260G>T
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9349
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His243Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

17-18874427-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874427
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874427
    reference: chr 17
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.742G>A
  hgvsp: ENSP00000379007.3:p.Asp248Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*245C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*245C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.661G>A
  hgvsp: ENSP00000379005.2:p.Asp221Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*245C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.493G>A
  hgvsp: ENSP00000324346.6:p.Asp165Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.742G>A
  hgvsp: ENSP00000379008.2:p.Asp248Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.742G>A
  hgvsp: ENSP00000401875.2:p.Asp248Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.493G>A
  hgvsp: ENSP00000379004.1:p.Asp165Asn
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5833
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp248Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS

17-18874429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874429
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874429
    reference: chr 17
allele count: 20
allele frequency: 1.651855033202286e-4
allele num: 121076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.744C>T
  hgvsp: ENST00000395645.3:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.744C>T
  hgvsp: ENST00000417251.2:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*243G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.495C>T
  hgvsp: ENST00000395642.1:c.495C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*243G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.495C>T
  hgvsp: ENST00000317977.6:c.495C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.744C>T
  hgvsp: ENST00000395647.2:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*243G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.663C>T
  hgvsp: ENST00000395643.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp248Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

17-18874430-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874430
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874430
    reference: chr 17
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.496G>A
  hgvsp: ENSP00000379004.1:p.Ala166Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.745G>A
  hgvsp: ENSP00000379007.3:p.Ala249Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.745G>A
  hgvsp: ENSP00000401875.2:p.Ala249Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.745G>A
  hgvsp: ENSP00000379008.2:p.Ala249Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.664G>A
  hgvsp: ENSP00000379005.2:p.Ala222Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*242C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*242C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.496G>A
  hgvsp: ENSP00000324346.6:p.Ala166Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*242C>T
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7804
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4663
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala249Thr
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-18874434-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874434
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874434
    reference: chr 17
allele count: 4
allele frequency: 3.303491790822899e-5
allele num: 121084
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.749T>C
  hgvsp: ENSP00000379007.3:p.Met250Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*238A>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*238A>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*238A>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.500T>C
  hgvsp: ENSP00000324346.6:p.Met167Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.668T>C
  hgvsp: ENSP00000379005.2:p.Met223Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.749T>C
  hgvsp: ENSP00000379008.2:p.Met250Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.500T>C
  hgvsp: ENSP00000379004.1:p.Met167Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.749T>C
  hgvsp: ENSP00000401875.2:p.Met250Thr
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17341
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7808
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5833
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9345
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met250Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

17-18874435-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874435
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874435
    reference: chr 17
allele count: 5
allele frequency: 4.129228329809725e-5
allele num: 121088
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*237C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.750G>A
  hgvsp: ENSP00000379007.3:p.Met250Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*237C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.501G>A
  hgvsp: ENSP00000379004.1:p.Met167Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*237C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.501G>A
  hgvsp: ENSP00000324346.6:p.Met167Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.750G>A
  hgvsp: ENSP00000379008.2:p.Met250Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.750G>A
  hgvsp: ENSP00000401875.2:p.Met250Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.669G>A
  hgvsp: ENSP00000379005.2:p.Met223Ile
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22580
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7810
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4727
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met250Ile
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-18874436-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874436
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874436
    reference: chr 17
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.502C>A
  hgvsp: ENSP00000324346.6:p.His168Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.670C>A
  hgvsp: ENSP00000379005.2:p.His224Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*236G>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*236G>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*236G>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.502C>A
  hgvsp: ENSP00000379004.1:p.His168Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.751C>A
  hgvsp: ENSP00000379007.3:p.His251Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.751C>A
  hgvsp: ENSP00000379008.2:p.His251Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.751C>A
  hgvsp: ENSP00000401875.2:p.His251Asn
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2963
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4728
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His251Asn
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ

17-18874438-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874438
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874436
    reference: chr 17
allele count: 66
allele frequency: 5.450221312016913e-4
allele num: 121096
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.754_755delAT
  hgvsp: ENSP00000379007.3:p.Met252ValfsTer77
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*232_*233delAT
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.673_674delAT
  hgvsp: ENSP00000379005.2:p.Met225ValfsTer77
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.754_755delAT
  hgvsp: ENSP00000401875.2:p.Met252ValfsTer256
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.754_755delAT
  hgvsp: ENSP00000379008.2:p.Met252ValfsTer81
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*232_*233delAT
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*232_*233delAT
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.505_506delAT
  hgvsp: ENSP00000324346.6:p.Met169ValfsTer81
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.505_506delAT
  hgvsp: ENSP00000379004.1:p.Met169ValfsTer81
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 20464
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17331
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met252ValfsTer81
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: CAT
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

17-18874439-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874439
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874439
    reference: chr 17
allele count: 2
allele frequency: 1.653466492501529e-5
allele num: 120958
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*233T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*233T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.754A>G
  hgvsp: ENSP00000379008.2:p.Met252Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.673A>G
  hgvsp: ENSP00000379005.2:p.Met225Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*233T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.505A>G
  hgvsp: ENSP00000324346.6:p.Met169Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.754A>G
  hgvsp: ENSP00000379007.3:p.Met252Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.505A>G
  hgvsp: ENSP00000379004.1:p.Met169Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.754A>G
  hgvsp: ENSP00000401875.2:p.Met252Val
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20455
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22535
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7792
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4721
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5829
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Met252Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-18874441-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874441
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874441
    reference: chr 17
allele count: 8
allele frequency: 6.613647261123328e-5
allele num: 120962
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.756G>A
  hgvsp: ENSP00000379008.2:p.Met252Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.507G>A
  hgvsp: ENSP00000379004.1:p.Met169Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.507G>A
  hgvsp: ENSP00000324346.6:p.Met169Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*231C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.756G>A
  hgvsp: ENSP00000379007.3:p.Met252Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*231C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.675G>A
  hgvsp: ENSP00000379005.2:p.Met225Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*231C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.756G>A
  hgvsp: ENSP00000401875.2:p.Met252Ile
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met252Ile
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

17-18874445-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874445
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874445
    reference: chr 17
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.760C>T
  hgvsp: ENSP00000401875.2:p.Arg254Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.511C>T
  hgvsp: ENSP00000324346.6:p.Arg171Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.511C>T
  hgvsp: ENSP00000379004.1:p.Arg171Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.760C>T
  hgvsp: ENSP00000379007.3:p.Arg254Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.760C>T
  hgvsp: ENSP00000379008.2:p.Arg254Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.679C>T
  hgvsp: ENSP00000379005.2:p.Arg227Ter
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*227G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*227G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*227G>A
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7839
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg254Ter
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

17-18874446-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874446
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874446
    reference: chr 17
allele count: 4
allele frequency: 3.303546357014255e-5
allele num: 121082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.680G>A
  hgvsp: ENSP00000379005.2:p.Arg227Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*226C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.761G>A
  hgvsp: ENSP00000401875.2:p.Arg254Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.512G>A
  hgvsp: ENSP00000324346.6:p.Arg171Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.761G>A
  hgvsp: ENSP00000379007.3:p.Arg254Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*226C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.761G>A
  hgvsp: ENSP00000379008.2:p.Arg254Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*226C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.512G>A
  hgvsp: ENSP00000379004.1:p.Arg171Gln
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22516
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg254Gln
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

17-18874448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874448
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874448
    reference: chr 17
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*224C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.514G>A
  hgvsp: ENSP00000324346.6:p.Asp172Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.763G>A
  hgvsp: ENSP00000401875.2:p.Asp255Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*224C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.682G>A
  hgvsp: ENSP00000379005.2:p.Asp228Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.514G>A
  hgvsp: ENSP00000379004.1:p.Asp172Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*224C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.763G>A
  hgvsp: ENSP00000379007.3:p.Asp255Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.763G>A
  hgvsp: ENSP00000379008.2:p.Asp255Asn
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4724
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9346
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp255Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

17-18874448-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874448
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874448
    reference: chr 17
allele count: 3
allele frequency: 2.477700693756194e-5
allele num: 121080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.763G>C
  hgvsp: ENSP00000379007.3:p.Asp255His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.514G>C
  hgvsp: ENSP00000324346.6:p.Asp172His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.763G>C
  hgvsp: ENSP00000379008.2:p.Asp255His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.763G>C
  hgvsp: ENSP00000401875.2:p.Asp255His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*224C>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.682G>C
  hgvsp: ENSP00000379005.2:p.Asp228His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*224C>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.514G>C
  hgvsp: ENSP00000379004.1:p.Asp172His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*224C>G
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4724
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp255His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

17-18874453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874453
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874453
    reference: chr 17
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.687C>T
  hgvsp: ENST00000395643.2:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.768C>T
  hgvsp: ENST00000395645.3:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.519C>T
  hgvsp: ENST00000317977.6:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*219G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*219G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.768C>T
  hgvsp: ENST00000417251.2:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.768C>T
  hgvsp: ENST00000395647.2:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.519C>T
  hgvsp: ENST00000395642.1:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*219G>A
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9324
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro256Pro
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

17-18874455-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874455
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874455
    reference: chr 17
allele count: 21
allele frequency: 1.734104046242775e-4
allele num: 121100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.689A>G
  hgvsp: ENSP00000379005.2:p.His230Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.521A>G
  hgvsp: ENSP00000379004.1:p.His174Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.770A>G
  hgvsp: ENSP00000401875.2:p.His257Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*217T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*217T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.770A>G
  hgvsp: ENSP00000379007.3:p.His257Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.770A>G
  hgvsp: ENSP00000379008.2:p.His257Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.521A>G
  hgvsp: ENSP00000324346.6:p.His174Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*217T>C
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2969
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4727
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His257Arg
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

17-18874460-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874460
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874460
    reference: chr 17
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.775G>A
  hgvsp: ENSP00000379007.3:p.Gly259Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.526G>A
  hgvsp: ENSP00000379004.1:p.Gly176Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.775G>A
  hgvsp: ENSP00000379008.2:p.Gly259Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*212C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.775G>A
  hgvsp: ENSP00000401875.2:p.Gly259Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*212C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*212C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.526G>A
  hgvsp: ENSP00000324346.6:p.Gly176Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.694G>A
  hgvsp: ENSP00000379005.2:p.Gly232Arg
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22446
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly259Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum

17-18874463-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874463
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874463
    reference: chr 17
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.529G>A
  hgvsp: ENSP00000324346.6:p.Asp177Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*209C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.778G>A
  hgvsp: ENSP00000401875.2:p.Asp260Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.529G>A
  hgvsp: ENSP00000379004.1:p.Asp177Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.697G>A
  hgvsp: ENSP00000379005.2:p.Asp233Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*209C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*209C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.778G>A
  hgvsp: ENSP00000379008.2:p.Asp260Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.778G>A
  hgvsp: ENSP00000379007.3:p.Asp260Asn
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp260Asn
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/17-18874464-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874464
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874464
    reference: chr 17
allele count: 51
allele frequency: 4.25248061369132e-4
allele num: 119930
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.779A>C
  hgvsp: ENSP00000401875.2:p.Asp260Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*208T>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*208T>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*208T>G
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.779A>C
  hgvsp: ENSP00000379008.2:p.Asp260Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.779A>C
  hgvsp: ENSP00000379007.3:p.Asp260Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.530A>C
  hgvsp: ENSP00000324346.6:p.Asp177Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.698A>C
  hgvsp: ENSP00000379005.2:p.Asp233Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.530A>C
  hgvsp: ENSP00000379004.1:p.Asp177Ala
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12112
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20041
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17029
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2924
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Asp260Ala
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

17-18874470-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874470
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874470
    reference: chr 17
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*202G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*202G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.785C>T
  hgvsp: ENSP00000379008.2:p.Pro262Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*202G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.785C>T
  hgvsp: ENSP00000401875.2:p.Pro262Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.785C>T
  hgvsp: ENSP00000379007.3:p.Pro262Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.536C>T
  hgvsp: ENSP00000324346.6:p.Pro179Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.536C>T
  hgvsp: ENSP00000379004.1:p.Pro179Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.704C>T
  hgvsp: ENSP00000379005.2:p.Pro235Leu
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5828
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22545
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro262Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-18874471-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874471
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874471
    reference: chr 17
allele count: 10
allele frequency: 8.254502831294471e-5
allele num: 121146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.786G>A
  hgvsp: ENST00000395645.3:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*201C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.537G>A
  hgvsp: ENST00000317977.6:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*201C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.705G>A
  hgvsp: ENST00000395643.2:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.786G>A
  hgvsp: ENST00000395647.2:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*201C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.537G>A
  hgvsp: ENST00000395642.1:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.786G>A
  hgvsp: ENST00000417251.2:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7972
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro262Pro
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-18874477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874477
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874477
    reference: chr 17
allele count: 175
allele frequency: 1.444537995476532e-3
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*195G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.792C>T
  hgvsp: ENST00000395647.2:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*195G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*195G>A
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.792C>T
  hgvsp: ENST00000395645.3:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.711C>T
  hgvsp: ENST00000395643.2:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.543C>T
  hgvsp: ENST00000317977.6:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.792C>T
  hgvsp: ENST00000417251.2:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.543C>T
  hgvsp: ENST00000395642.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20005
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17322
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr264Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

17-18874478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874478
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874478
    reference: chr 17
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.793G>A
  hgvsp: ENSP00000379007.3:p.Gly265Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.544G>A
  hgvsp: ENSP00000379004.1:p.Gly182Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.712G>A
  hgvsp: ENSP00000379005.2:p.Gly238Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*194C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.544G>A
  hgvsp: ENSP00000324346.6:p.Gly182Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.793G>A
  hgvsp: ENSP00000401875.2:p.Gly265Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.793G>A
  hgvsp: ENSP00000379008.2:p.Gly265Arg
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*194C>T
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*194C>T
  variant of: http://identifiers.org/hgnc/32554
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8032
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly265Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

17-18874481-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18874481
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18874481
    reference: chr 17
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.796A>G
  hgvsp: ENSP00000379008.2:p.Met266Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.796A>G
  hgvsp: ENSP00000401875.2:p.Met266Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000463562
  ensembl transcript: ENST00000585154
  gene symbol: FAM83G
  hgvsc: ENST00000585154.2:c.*191T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.715A>G
  hgvsp: ENSP00000379005.2:p.Met239Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000343279
  ensembl transcript: ENST00000345041
  gene symbol: FAM83G
  hgvsc: ENST00000345041.4:c.*191T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.547A>G
  hgvsp: ENSP00000324346.6:p.Met183Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188522
  ensembl protein: ENSP00000373647
  ensembl transcript: ENST00000388995
  gene symbol: FAM83G
  hgvsc: ENST00000388995.6:c.*191T>C
  variant of: http://identifiers.org/hgnc/32554
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.796A>G
  hgvsp: ENSP00000379007.3:p.Met266Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.547A>G
  hgvsp: ENSP00000379004.1:p.Met183Val
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met266Val
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 7032
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2231
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4145
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090133982947625e-5
allele num: 16420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66268
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.88e1

FS
type: SiteQuality
SIO_000300: 3.161e0

VQSLOD
type: SiteQuality
SIO_000300: -6.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.068e0

QD
type: SiteQuality
SIO_000300: 1.391e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.47e-1

DP
type: SiteQuality
SIO_000300: 2.041279e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.42e-1

GenotypeQuality
all individuals: 3119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4762
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7035
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2231
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.092360180333861e-5
allele num: 16414
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQ
type: SiteQuality
SIO_000300: 5.928e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

VQSLOD
type: SiteQuality
SIO_000300: -4.451e-1

QD
type: SiteQuality
SIO_000300: 9.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 2.462e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 2.041414e6

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4759
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7036
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19846
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.040571e6

MQRankSum
type: SiteQuality
SIO_000300: 5.52e-1

QD
type: SiteQuality
SIO_000300: 1.065e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

FS
type: SiteQuality
SIO_000300: 1.723e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.561e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

GenotypeQuality
all individuals: 7008
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14993
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 19730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.459010722933241e-4
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66224
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

FS
type: SiteQuality
SIO_000300: 3.583e0

MQRankSum
type: SiteQuality
SIO_000300: -4.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 2.039015e6

QD
type: SiteQuality
SIO_000300: 1.298e1

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4138
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510300247689241e-5
allele num: 66212
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.037874e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.261e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.782e0

QD
type: SiteQuality
SIO_000300: 8.93e0

GenotypeQuality
all individuals: 18997
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14996
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3352
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66100
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.193006750908776e-4
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

FS
type: SiteQuality
SIO_000300: 5.235e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

DP
type: SiteQuality
SIO_000300: 2.030162e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.223e0

VQSLOD
type: SiteQuality
SIO_000300: 8.74e-1

QD
type: SiteQuality
SIO_000300: 1.176e1

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2229
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3340
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4732
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514279657167086e-5
allele num: 66038
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.1e-2

FS
type: SiteQuality
SIO_000300: 1.778e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

DP
type: SiteQuality
SIO_000300: 2.025777e6

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

QD
type: SiteQuality
SIO_000300: 1.744e1

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQ
type: SiteQuality
SIO_000300: 6.001e1

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2229
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4732
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14997
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 4130
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-4
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.725703382900754e-4
allele num: 66038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 1.778e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

MQ
type: SiteQuality
SIO_000300: 6.001e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

DP
type: SiteQuality
SIO_000300: 2.025777e6

QD
type: SiteQuality
SIO_000300: 1.744e1

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14988
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 513
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.026061974143238e-4
allele num: 9746
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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QD
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.019454e6

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 15918
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.51758885482745e-5
allele num: 65894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11542
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.4742e1

MQRankSum
type: SiteQuality
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DP
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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SIO_000300: -3.072e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.312334301224592e-5
allele num: 15842
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European (Non-Finnish)
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allele frequency: 1.518741267237713e-5
allele num: 65844
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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SIO_000300: 1.99576e6

MQRankSum
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SIO_000300: -1.013e0

ClippingRankSum
type: SiteQuality
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QD
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FS
type: SiteQuality
SIO_000300: 1.501e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.531e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65814
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 15790
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.486750348675035e-4
allele num: 8604
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.272e1

DP
type: SiteQuality
SIO_000300: 1.99333e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 2.18e0

MQRankSum
type: SiteQuality
SIO_000300: -8.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.526904049349539e-5
allele num: 65492
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

QD
type: SiteQuality
SIO_000300: 1.127e1

MQ
type: SiteQuality
SIO_000300: 5.904e1

VQSLOD
type: SiteQuality
SIO_000300: 5.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 1.956439e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.527415143603133e-5
allele num: 15320
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.109295292787977e-5
allele num: 65474
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8594
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.394e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

FS
type: SiteQuality
SIO_000300: 8.815e0

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.047e0

DP
type: SiteQuality
SIO_000300: 1.949114e6

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 3
allele frequency: 1.855517070757051e-4
allele num: 16168
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8534
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64824
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.895e1

FS
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 9.950248756218905e-5
allele num: 10050
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65000
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Latino
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num of homozygotes: 0

East Asian
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ClippingRankSum
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MQRankSum
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DP
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MQ
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.052409877598364e-5
allele num: 65522
num of homozygotes: 0

Latino
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South Asian
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MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.524855138761818e-5
allele num: 65580
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 16370
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Latino
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allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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African
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QD
type: SiteQuality
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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DP
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5547
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.0480370641307e-5
allele num: 65616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.521e0

DP
type: SiteQuality
SIO_000300: 1.695071e6

QD
type: SiteQuality
SIO_000300: 1.005e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2260
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7691
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2908
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9020
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.071276789508833e-5
allele num: 65884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.21557719054242e-4
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.305e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 6.849e0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.52e-1

MQ
type: SiteQuality
SIO_000300: 5.121e1

DP
type: SiteQuality
SIO_000300: 1.713718e6

QD
type: SiteQuality
SIO_000300: 6.48e0

GenotypeQuality
all individuals: 258
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9057
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variant carriers: 0

GenotypeQuality
all individuals: 4608
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5680
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variant carriers: 0

GenotypeQuality
all individuals: 2920
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65954
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.676e0

DP
type: SiteQuality
SIO_000300: 1.71679e6

MQRankSum
type: SiteQuality
SIO_000300: 9.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.572e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.558e-1

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 38
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GenotypeQuality
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GenotypeQuality
all individuals: 22199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2934
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 1.945903872348706e-3
allele num: 10278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.486e1

MQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 1.724793e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.623e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 588
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9149
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512721991952319e-5
allele num: 66106
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

FS
type: SiteQuality
SIO_000300: 6.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e0

DP
type: SiteQuality
SIO_000300: 1.726056e6

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5745
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512721991952319e-5
allele num: 66106
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

DP
type: SiteQuality
SIO_000300: 1.726056e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e0

QD
type: SiteQuality
SIO_000300: 1.233e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 6.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4675
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 2275
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GenotypeQuality
all individuals: 7745
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 2936
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GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 2.530659918240218e-3
allele num: 10274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.726056e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.233e1

FS
type: SiteQuality
SIO_000300: 6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

GenotypeQuality
all individuals: 163
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 178
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GenotypeQuality
all individuals: 41
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7736
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.704968944099378e-5
allele num: 10304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66168
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.933e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.728595e6

MQRankSum
type: SiteQuality
SIO_000300: -2.456e0

QD
type: SiteQuality
SIO_000300: 1.197e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.285e0

VQSLOD
type: SiteQuality
SIO_000300: -1.911e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.15e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.057305984351871e-4
allele num: 66206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.277e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e0

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.731915e6

GenotypeQuality
all individuals: 2292
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 2944
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.019141356198297e-5
allele num: 66244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.095e1

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.937e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.732376e6

FS
type: SiteQuality
SIO_000300: 2.217e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.16e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66244
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.732376e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

QD
type: SiteQuality
SIO_000300: 1.095e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.937e0

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.217e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.16e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.02e-1

FS
type: SiteQuality
SIO_000300: 6.066e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.73303e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7760
bin: 9.75e1
variant carriers: 11

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.509707418702255e-4
allele num: 66238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 1.73303e6

QD
type: SiteQuality
SIO_000300: 1.215e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

FS
type: SiteQuality
SIO_000300: 6.066e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4561
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.058518026450872e-5
allele num: 66236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

DP
type: SiteQuality
SIO_000300: 1.733748e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

QD
type: SiteQuality
SIO_000300: 1.243e1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21972
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variant carriers: 0

GenotypeQuality
all individuals: 5785
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQRankSum
type: SiteQuality
SIO_000300: 7.52e-1

FS
type: SiteQuality
SIO_000300: 3.55e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.441e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

DP
type: SiteQuality
SIO_000300: 1.73434e6

GenotypeQuality
all individuals: 2950
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2296
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731002250302925e-4
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66260
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.735063e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-1

QD
type: SiteQuality
SIO_000300: 1.159e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508614187007815e-5
allele num: 66286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

FS
type: SiteQuality
SIO_000300: 8.013999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

MQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

QD
type: SiteQuality
SIO_000300: 1.325e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 1.736585e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.475e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.965e0

GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66326
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.157139551029854e-3
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.008e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.8e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.738399e6

MQ
type: SiteQuality
SIO_000300: 5.933e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.64e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5793
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.451241671714113e-4
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

QD
type: SiteQuality
SIO_000300: 1.184e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

DP
type: SiteQuality
SIO_000300: 1.739173e6

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

GenotypeQuality
all individuals: 7779
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 61
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GenotypeQuality
all individuals: 33
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66338
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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DP
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QD
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.506250941406838e-5
allele num: 66390
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East Asian
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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ClippingRankSum
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BaseQRankSum
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DP
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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VQSLOD
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.506160195198361e-5
allele num: 66394
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 16512
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Latino
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allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11568
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.505343971097396e-5
allele num: 66430
num of homozygotes: 0

InbreedingCoeff
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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MQ
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505343971097396e-5
allele num: 66430
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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Other
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South Asian
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MQ
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DP
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FS
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele num: 66444
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European (Finnish)
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South Asian
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African
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Latino
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InbreedingCoeff
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BaseQRankSum
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QD
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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South Asian
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East Asian
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European (Finnish)
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QD
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InbreedingCoeff
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FS
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MQ
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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African
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European (Finnish)
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Other
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East Asian
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South Asian
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQRankSum
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QD
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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MQ
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VQSLOD
type: SiteQuality
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QD
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ClippingRankSum
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SIO_000300: -7.7e-1

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.746683e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
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African
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allele frequency: 0.0e0
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East Asian
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allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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FS
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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ClippingRankSum
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VQSLOD
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FS
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QD
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DP
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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SIO_000300: 1.2e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504392827055001e-5
allele num: 66472
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.939e1

DP
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SIO_000300: 1.748255e6

BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 1.4159e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
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allele frequency: 8.094357076780758e-4
allele num: 8648
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African
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allele count: 4
allele frequency: 3.854307188282906e-4
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.016666165277819e-5
allele num: 66482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.231e1

DP
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.504347564461293e-5
allele num: 66474
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European (Finnish)
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allele count: 0
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DP
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VQSLOD
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QD
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MQ
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ClippingRankSum
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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African
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Other
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MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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East Asian
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MQ
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ReadPosRankSum
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DP
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FS
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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QD
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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ClippingRankSum
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DP
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -6.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.483e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.91e0

QD
type: SiteQuality
SIO_000300: 1.333e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 66

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.926782273603083e-4
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 8.420799374454904e-4
allele num: 66502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.239341085271318e-4
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.858e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

QD
type: SiteQuality
SIO_000300: 1.699e1

DP
type: SiteQuality
SIO_000300: 1.753801e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012864933265042e-5
allele num: 66382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.796e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

DP
type: SiteQuality
SIO_000300: 1.747039e6

QD
type: SiteQuality
SIO_000300: 1.241e1

VQSLOD
type: SiteQuality
SIO_000300: -4.095e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.252833680314596e-4
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66384
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.2e0

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

FS
type: SiteQuality
SIO_000300: 1.126e0

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

DP
type: SiteQuality
SIO_000300: 1.75441e6

QD
type: SiteQuality
SIO_000300: 1.084e1

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503940323647958e-5
allele num: 66492
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.423e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 4.388e0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.088e0

DP
type: SiteQuality
SIO_000300: 1.750446e6

QD
type: SiteQuality
SIO_000300: 2.053e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.512363877023043e-5
allele num: 66484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

QD
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SIO_000300: 1.211e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.49e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 3.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 1.75062e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

QD
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 902
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.92789666473877e-4
allele num: 10374
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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QD
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DP
type: SiteQuality
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FS
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

African
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allele count: 2
allele frequency: 1.92789666473877e-4
allele num: 10374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.857056930618628e-4
allele num: 66502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

DP
type: SiteQuality
SIO_000300: 1.753211e6

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

FS
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.145e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.607e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.88e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e0

VQSLOD
type: SiteQuality
SIO_000300: -1.528e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

FS
type: SiteQuality
SIO_000300: 1.588e0

DP
type: SiteQuality
SIO_000300: 1.751869e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.649e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.765e1

QD
type: SiteQuality
SIO_000300: 1.36e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

DP
type: SiteQuality
SIO_000300: 1.752611e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.755e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.326e0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 7702
bin: 9.75e1
variant carriers: 22

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.377139484556364e-3
allele num: 10166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 5.014587892049599e-4
allele num: 65808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.479471120389701e-4
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.5625e-4
allele num: 6400
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

DP
type: SiteQuality
SIO_000300: 1.780985e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.338e0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.836e2

QD
type: SiteQuality
SIO_000300: 6.2e-1

FS
type: SiteQuality
SIO_000300: 1.97482e2

MQ
type: SiteQuality
SIO_000300: 5.832e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.017e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502629601803156e-5
allele num: 66550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.761878e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 9.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

QD
type: SiteQuality
SIO_000300: 1.185e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.941230911614993e-4
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005349522149426e-5
allele num: 66548
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.762529e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.086e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

QD
type: SiteQuality
SIO_000300: 1.11e1

FS
type: SiteQuality
SIO_000300: 1.792e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.32e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 175

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.062860613422411e-3
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 2.3121387283237e-3
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 143
allele frequency: 2.148695756701526e-3
allele num: 66552
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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DP
type: SiteQuality
SIO_000300: 1.772021e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 1.115e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.174e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.09e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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Other
type: Population
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.326e0

MQ
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
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SIO_000300: 1.764224e6

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-3

InbreedingCoeff
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SIO_000300: 1.0e-4

ClippingRankSum
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QD
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GenotypeQuality
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