http://identifiers.org/exac.variant/17-18918403-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918403
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918403
    reference: chr 17
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.931A>C
  hgvsp: ENSP00000379004.1:p.Met311Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1180A>C
  hgvsp: ENSP00000379008.2:p.Met394Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.931A>C
  hgvsp: ENSP00000324346.6:p.Met311Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1024A>C
  hgvsp: ENSP00000401875.2:p.Met342Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1132A>C
  hgvsp: ENSP00000379007.3:p.Met378Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1051A>C
  hgvsp: ENSP00000379005.2:p.Met351Leu
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9537
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met394Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-18918404-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918404
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918404
    reference: chr 17
allele count: 1
allele frequency: 8.270477702792114e-6
allele num: 120912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1133T>C
  hgvsp: ENSP00000379007.3:p.Met378Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.932T>C
  hgvsp: ENSP00000324346.6:p.Met311Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1181T>C
  hgvsp: ENSP00000379008.2:p.Met394Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1052T>C
  hgvsp: ENSP00000379005.2:p.Met351Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.932T>C
  hgvsp: ENSP00000379004.1:p.Met311Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1025T>C
  hgvsp: ENSP00000401875.2:p.Met342Thr
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25510
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met394Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

17-18918405-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918405
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918405
    reference: chr 17
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.933G>A
  hgvsp: ENSP00000379004.1:p.Met311Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1134G>A
  hgvsp: ENSP00000379007.3:p.Met378Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1026G>A
  hgvsp: ENSP00000401875.2:p.Met342Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.933G>A
  hgvsp: ENSP00000324346.6:p.Met311Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1182G>A
  hgvsp: ENSP00000379008.2:p.Met394Ile
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1053G>A
  hgvsp: ENSP00000379005.2:p.Met351Ile
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9537
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met394Ile
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

17-18918407-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918407
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918407
    reference: chr 17
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1055C>G
  hgvsp: ENSP00000379005.2:p.Ser352Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1136C>G
  hgvsp: ENSP00000379007.3:p.Ser379Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1184C>G
  hgvsp: ENSP00000379008.2:p.Ser395Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1028C>G
  hgvsp: ENSP00000401875.2:p.Ser343Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.935C>G
  hgvsp: ENSP00000379004.1:p.Ser312Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.935C>G
  hgvsp: ENSP00000324346.6:p.Ser312Trp
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25513
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42985
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser395Trp
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

17-18918407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918407
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918407
    reference: chr 17
allele count: 7
allele frequency: 5.789142876046181e-5
allele num: 120916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1028C>T
  hgvsp: ENSP00000401875.2:p.Ser343Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.935C>T
  hgvsp: ENSP00000324346.6:p.Ser312Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1055C>T
  hgvsp: ENSP00000379005.2:p.Ser352Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1184C>T
  hgvsp: ENSP00000379008.2:p.Ser395Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.935C>T
  hgvsp: ENSP00000379004.1:p.Ser312Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1136C>T
  hgvsp: ENSP00000379007.3:p.Ser379Leu
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42985
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser395Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

17-18918408-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918408
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918408
    reference: chr 17
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.936G>A
  hgvsp: ENST00000317977.6:c.936G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1137G>A
  hgvsp: ENST00000395645.3:c.1137G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1029G>A
  hgvsp: ENST00000417251.2:c.1029G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1185G>A
  hgvsp: ENST00000395647.2:c.1185G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1056G>A
  hgvsp: ENST00000395643.2:c.1056G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.936G>A
  hgvsp: ENST00000395642.1:c.936G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser395Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

17-18918408-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918408
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918408
    reference: chr 17
allele count: 5
allele frequency: 4.135102054318701e-5
allele num: 120916
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1029G>C
  hgvsp: ENST00000417251.2:c.1029G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1137G>C
  hgvsp: ENST00000395645.3:c.1137G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.936G>C
  hgvsp: ENST00000317977.6:c.936G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1185G>C
  hgvsp: ENST00000395647.2:c.1185G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1056G>C
  hgvsp: ENST00000395643.2:c.1056G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.936G>C
  hgvsp: ENST00000395642.1:c.936G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9524
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser395Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

17-18918410-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918410
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918410
    reference: chr 17
allele count: 3
allele frequency: 2.481020195504391e-5
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1139C>T
  hgvsp: ENSP00000379007.3:p.Ser380Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1187C>T
  hgvsp: ENSP00000379008.2:p.Ser396Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.938C>T
  hgvsp: ENSP00000324346.6:p.Ser313Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1058C>T
  hgvsp: ENSP00000379005.2:p.Ser353Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.938C>T
  hgvsp: ENSP00000379004.1:p.Ser313Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1031C>T
  hgvsp: ENSP00000401875.2:p.Ser344Leu
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9518
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2356
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser396Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

17-18918411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918411
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918411
    reference: chr 17
allele count: 1
allele frequency: 8.269930532583527e-6
allele num: 120920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1032G>A
  hgvsp: ENST00000417251.2:c.1032G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.939G>A
  hgvsp: ENST00000317977.6:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1140G>A
  hgvsp: ENST00000395645.3:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1188G>A
  hgvsp: ENST00000395647.2:c.1188G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.939G>A
  hgvsp: ENST00000395642.1:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1059G>A
  hgvsp: ENST00000395643.2:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43050
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser396Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/17-18918416-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918416
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918416
    reference: chr 17
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1037C>A
  hgvsp: ENSP00000401875.2:p.Thr346Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1145C>A
  hgvsp: ENSP00000379007.3:p.Thr382Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1064C>A
  hgvsp: ENSP00000379005.2:p.Thr355Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.944C>A
  hgvsp: ENSP00000379004.1:p.Thr315Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.944C>A
  hgvsp: ENSP00000324346.6:p.Thr315Asn
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1193C>A
  hgvsp: ENSP00000379008.2:p.Thr398Asn
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr398Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

17-18918435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918435
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918435
    reference: chr 17
allele count: 1
allele frequency: 8.274446853227862e-6
allele num: 120854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1056C>T
  hgvsp: ENST00000417251.2:c.1056C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1212C>T
  hgvsp: ENST00000395647.2:c.1212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1164C>T
  hgvsp: ENST00000395645.3:c.1164C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.963C>T
  hgvsp: ENST00000317977.6:c.963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1083C>T
  hgvsp: ENST00000395643.2:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.963C>T
  hgvsp: ENST00000395642.1:c.963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser404Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

17-18918442-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918442
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918442
    reference: chr 17
allele count: 7
allele frequency: 5.79652539706199e-5
allele num: 120762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.970C>G
  hgvsp: ENSP00000379004.1:p.Leu324Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1063C>G
  hgvsp: ENSP00000401875.2:p.Leu355Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1219C>G
  hgvsp: ENSP00000379008.2:p.Leu407Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1090C>G
  hgvsp: ENSP00000379005.2:p.Leu364Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.970C>G
  hgvsp: ENSP00000324346.6:p.Leu324Val
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1171C>G
  hgvsp: ENSP00000379007.3:p.Leu391Val
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu407Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

17-18918452-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918452
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918452
    reference: chr 17
allele count: 1
allele frequency: 8.302613662781043e-6
allele num: 120444
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1229T>C
  hgvsp: ENSP00000379008.2:p.Met410Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1181T>C
  hgvsp: ENSP00000379007.3:p.Met394Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.980T>C
  hgvsp: ENSP00000379004.1:p.Met327Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.980T>C
  hgvsp: ENSP00000324346.6:p.Met327Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1073T>C
  hgvsp: ENSP00000401875.2:p.Met358Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1100T>C
  hgvsp: ENSP00000379005.2:p.Met367Thr
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15543
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met410Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-18918455-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918455
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918455
    reference: chr 17
allele count: 1
allele frequency: 8.308960382876895e-6
allele num: 120352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1076A>G
  hgvsp: ENSP00000401875.2:p.Asp359Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1103A>G
  hgvsp: ENSP00000379005.2:p.Asp368Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.983A>G
  hgvsp: ENSP00000324346.6:p.Asp328Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1184A>G
  hgvsp: ENSP00000379007.3:p.Asp395Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.983A>G
  hgvsp: ENSP00000379004.1:p.Asp328Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1232A>G
  hgvsp: ENSP00000379008.2:p.Asp411Gly
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp411Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

17-18918463-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918463
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918463
    reference: chr 17
allele count: 1
allele frequency: 8.353660574063554e-6
allele num: 119708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1192A>T
  hgvsp: ENSP00000379007.3:p.Arg398Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1084A>T
  hgvsp: ENSP00000401875.2:p.Arg362Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.991A>T
  hgvsp: ENSP00000379004.1:p.Arg331Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.991A>T
  hgvsp: ENSP00000324346.6:p.Arg331Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1240A>T
  hgvsp: ENSP00000379008.2:p.Arg414Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1111A>T
  hgvsp: ENSP00000379005.2:p.Arg371Trp
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9198
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg414Trp
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

17-18918466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918466
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918466
    reference: chr 17
allele count: 4
allele frequency: 3.34817691766833e-5
allele num: 119468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.994C>T
  hgvsp: ENSP00000379004.1:p.Arg332Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.994C>T
  hgvsp: ENSP00000324346.6:p.Arg332Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1114C>T
  hgvsp: ENSP00000379005.2:p.Arg372Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1087C>T
  hgvsp: ENSP00000401875.2:p.Arg363Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1243C>T
  hgvsp: ENSP00000379008.2:p.Arg415Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1195C>T
  hgvsp: ENSP00000379007.3:p.Arg399Trp
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15405
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 9164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41356
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg415Trp
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

17-18918468-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918468
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918468
    reference: chr 17
allele count: 1
allele frequency: 8.381808123648433e-6
allele num: 119306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1089G>T
  hgvsp: ENST00000417251.2:c.1089G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1116G>T
  hgvsp: ENST00000395643.2:c.1116G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.996G>T
  hgvsp: ENST00000395642.1:c.996G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1197G>T
  hgvsp: ENST00000395645.3:c.1197G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1245G>T
  hgvsp: ENST00000395647.2:c.1245G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.996G>T
  hgvsp: ENST00000317977.6:c.996G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9136
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg415Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

17-18918472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918472
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918472
    reference: chr 17
allele count: 2
allele frequency: 1.684778030494482e-5
allele num: 118710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1120C>T
  hgvsp: ENSP00000379005.2:p.Arg374Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1000C>T
  hgvsp: ENSP00000379004.1:p.Arg334Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1249C>T
  hgvsp: ENSP00000379008.2:p.Arg417Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1201C>T
  hgvsp: ENSP00000379007.3:p.Arg401Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1000C>T
  hgvsp: ENSP00000324346.6:p.Arg334Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1093C>T
  hgvsp: ENSP00000401875.2:p.Arg365Cys
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40515
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg417Cys
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

17-18918473-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918473
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918473
    reference: chr 17
allele count: 4
allele frequency: 3.369783154454011e-5
allele num: 118702
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1250G>A
  hgvsp: ENSP00000379008.2:p.Arg417His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1001G>A
  hgvsp: ENSP00000324346.6:p.Arg334His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1202G>A
  hgvsp: ENSP00000379007.3:p.Arg401His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1094G>A
  hgvsp: ENSP00000401875.2:p.Arg365His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1001G>A
  hgvsp: ENSP00000379004.1:p.Arg334His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1121G>A
  hgvsp: ENSP00000379005.2:p.Arg374His
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15243
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2811
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Arg417His
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/17-18918475-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918475
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918475
    reference: chr 17
allele count: 1
allele frequency: 8.45337120443633e-6
allele num: 118296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1003C>A
  hgvsp: ENSP00000324346.6:p.Pro335Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1096C>A
  hgvsp: ENSP00000401875.2:p.Pro366Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1204C>A
  hgvsp: ENSP00000379007.3:p.Pro402Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1123C>A
  hgvsp: ENSP00000379005.2:p.Pro375Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1003C>A
  hgvsp: ENSP00000379004.1:p.Pro335Thr
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1252C>A
  hgvsp: ENSP00000379008.2:p.Pro418Thr
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8940
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro418Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

17-18918477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918477
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918477
    reference: chr 17
allele count: 1
allele frequency: 8.477162524159914e-6
allele num: 117964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1005C>T
  hgvsp: ENST00000395642.1:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1206C>T
  hgvsp: ENST00000395645.3:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1005C>T
  hgvsp: ENST00000317977.6:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1254C>T
  hgvsp: ENST00000395647.2:c.1254C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1125C>T
  hgvsp: ENST00000395643.2:c.1125C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1098C>T
  hgvsp: ENST00000417251.2:c.1098C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3903
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8792
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro418Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

17-18918478-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918478
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918478
    reference: chr 17
allele count: 15
allele frequency: 1.273842077551506e-4
allele num: 117754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1006C>G
  hgvsp: ENSP00000379004.1:p.Arg336Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1006C>G
  hgvsp: ENSP00000324346.6:p.Arg336Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1207C>G
  hgvsp: ENSP00000379007.3:p.Arg403Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1255C>G
  hgvsp: ENSP00000379008.2:p.Arg419Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1099C>G
  hgvsp: ENSP00000401875.2:p.Arg367Gly
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1126C>G
  hgvsp: ENSP00000379005.2:p.Arg376Gly
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14978
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23771
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9606
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4168
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39086
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 9.75e1
  variant carriers: 14
hgvs: p.Arg419Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

17-18918478-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918478
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918478
    reference: chr 17
allele count: 1
allele frequency: 8.492280517010038e-6
allele num: 117754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1207C>T
  hgvsp: ENSP00000379007.3:p.Arg403Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1099C>T
  hgvsp: ENSP00000401875.2:p.Arg367Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1006C>T
  hgvsp: ENSP00000379004.1:p.Arg336Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1006C>T
  hgvsp: ENSP00000324346.6:p.Arg336Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1126C>T
  hgvsp: ENSP00000379005.2:p.Arg376Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1255C>T
  hgvsp: ENSP00000379008.2:p.Arg419Cys
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39086
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg419Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD

17-18918479-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918479
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918479
    reference: chr 17
allele count: 3
allele frequency: 2.564497102118275e-5
allele num: 116982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1007G>T
  hgvsp: ENSP00000324346.6:p.Arg336Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1100G>T
  hgvsp: ENSP00000401875.2:p.Arg367Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1256G>T
  hgvsp: ENSP00000379008.2:p.Arg419Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1127G>T
  hgvsp: ENSP00000379005.2:p.Arg376Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1208G>T
  hgvsp: ENSP00000379007.3:p.Arg403Leu
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1007G>T
  hgvsp: ENSP00000379004.1:p.Arg336Leu
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2096
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg419Leu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

17-18918481-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918481
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918481
    reference: chr 17
allele count: 1
allele frequency: 8.549200649739249e-6
allele num: 116970
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1258T>G
  hgvsp: ENSP00000379008.2:p.Ser420Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1009T>G
  hgvsp: ENSP00000379004.1:p.Ser337Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1102T>G
  hgvsp: ENSP00000401875.2:p.Ser368Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1129T>G
  hgvsp: ENSP00000379005.2:p.Ser377Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1210T>G
  hgvsp: ENSP00000379007.3:p.Ser404Ala
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1009T>G
  hgvsp: ENSP00000324346.6:p.Ser337Ala
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8303
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37883
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser420Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

17-18918483-C-CAGGGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918483
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918490
    reference: chr 17
allele count: 1
allele frequency: 8.583396278239373e-6
allele num: 116504
alternate allele: CAGGGTGT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1131_1132insAGGGTGT
  hgvsp: ENSP00000379005.2:p.Gly378ArgfsTer142
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1011_1012insAGGGTGT
  hgvsp: ENSP00000324346.6:p.Gly338ArgfsTer179
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1104_1105insAGGGTGT
  hgvsp: ENSP00000401875.2:p.Gly369ArgfsTer142
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1011_1012insAGGGTGT
  hgvsp: ENSP00000379004.1:p.Gly338ArgfsTer179
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1212_1213insAGGGTGT
  hgvsp: ENSP00000379007.3:p.Gly405ArgfsTer142
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1260_1261insAGGGTGT
  hgvsp: ENSP00000379008.2:p.Gly421ArgfsTer142
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8163
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36637
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly421ArgfsTer142
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

17-18918483-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918483
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918483
    reference: chr 17
allele count: 43
allele frequency: 3.690860399642931e-4
allele num: 116504
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1011C>T
  hgvsp: ENST00000317977.6:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1260C>T
  hgvsp: ENST00000395647.2:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1104C>T
  hgvsp: ENST00000417251.2:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1011C>T
  hgvsp: ENST00000395642.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1212C>T
  hgvsp: ENST00000395645.3:c.1212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1131C>T
  hgvsp: ENST00000395643.2:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14309
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 22415
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8788
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36637
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 9.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser420Ser
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

17-18918484-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918484
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918484
    reference: chr 17
allele count: 1
allele frequency: 8.600227045994014e-6
allele num: 116276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1105G>A
  hgvsp: ENSP00000401875.2:p.Gly369Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1213G>A
  hgvsp: ENSP00000379007.3:p.Gly405Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1012G>A
  hgvsp: ENSP00000379004.1:p.Gly338Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1132G>A
  hgvsp: ENSP00000379005.2:p.Gly378Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1261G>A
  hgvsp: ENSP00000379008.2:p.Gly421Ser
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1012G>A
  hgvsp: ENSP00000324346.6:p.Gly338Ser
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly421Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

17-18918486-C-CCTTCAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918486
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918492
    reference: chr 17
allele count: 1
allele frequency: 8.656809446310469e-6
allele num: 115516
alternate allele: CCTTCAA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1107_1108insCTTCAA
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1014_1015insCTTCAA
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1263_1264insCTTCAA
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1215_1216insCTTCAA
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1134_1135insCTTCAA
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1014_1015insCTTCAA
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 13452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7939
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34375
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly421_Glu422insLeuGln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-18918486-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918486
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918486
    reference: chr 17
allele count: 4
allele frequency: 3.462723778524187e-5
allele num: 115516
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1134C>T
  hgvsp: ENST00000395643.2:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1107C>T
  hgvsp: ENST00000417251.2:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1014C>T
  hgvsp: ENST00000317977.6:c.1014C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1263C>T
  hgvsp: ENST00000395647.2:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1014C>T
  hgvsp: ENST00000395642.1:c.1014C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1215C>T
  hgvsp: ENST00000395645.3:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 6624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13452
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly421Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

17-18918487-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918487
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918487
    reference: chr 17
allele count: 2
allele frequency: 1.729415630458468e-5
allele num: 115646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1108G>A
  hgvsp: ENSP00000401875.2:p.Glu370Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1264G>A
  hgvsp: ENSP00000379008.2:p.Glu422Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1216G>A
  hgvsp: ENSP00000379007.3:p.Glu406Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1015G>A
  hgvsp: ENSP00000324346.6:p.Glu339Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1135G>A
  hgvsp: ENSP00000379005.2:p.Glu379Lys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1015G>A
  hgvsp: ENSP00000379004.1:p.Glu339Lys
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8388
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21262
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu422Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

17-18918487-G-GCAGAGGCCCCGCCCAAGCCTTCCTCACC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918487
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918515
    reference: chr 17
allele count: 1
allele frequency: 8.64707815229234e-6
allele num: 115646
alternate allele: GCAGAGGCCCCGCCCAAGCCTTCCTCACC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsp: ENSP00000324346.6:p.Glu339AlafsTer185
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsp: ENSP00000379005.2:p.Glu379AlafsTer148
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsp: ENSP00000379008.2:p.Glu422AlafsTer148
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsp: ENSP00000379007.3:p.Glu406AlafsTer148
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsp: ENSP00000379004.1:p.Glu339AlafsTer185
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsp: ENSP00000401875.2:p.Glu370AlafsTer148
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34687
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu422AlafsTer148
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-18918490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918490
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918490
    reference: chr 17
allele count: 10
allele frequency: 8.705038476270065e-5
allele num: 114876
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1267C>T
  hgvsp: ENSP00000379008.2:p.Arg423Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1111C>T
  hgvsp: ENSP00000401875.2:p.Arg371Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1138C>T
  hgvsp: ENSP00000379005.2:p.Arg380Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1219C>T
  hgvsp: ENSP00000379007.3:p.Arg407Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1018C>T
  hgvsp: ENSP00000324346.6:p.Arg340Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1018C>T
  hgvsp: ENSP00000379004.1:p.Arg340Trp
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8070
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20275
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12925
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg423Trp
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

17-18918491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918491
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918491
    reference: chr 17
allele count: 2
allele frequency: 1.745200698080279e-5
allele num: 114600
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1268G>A
  hgvsp: ENSP00000379008.2:p.Arg423Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1112G>A
  hgvsp: ENSP00000401875.2:p.Arg371Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1139G>A
  hgvsp: ENSP00000379005.2:p.Arg380Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1019G>A
  hgvsp: ENSP00000324346.6:p.Arg340Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1220G>A
  hgvsp: ENSP00000379007.3:p.Arg407Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1019G>A
  hgvsp: ENSP00000379004.1:p.Arg340Gln
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10384
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg423Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-18918495-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918495
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918495
    reference: chr 17
allele count: 1
allele frequency: 8.789045333895832e-6
allele num: 113778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1224G>T
  hgvsp: ENSP00000379007.3:p.Glu408Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1023G>T
  hgvsp: ENSP00000324346.6:p.Glu341Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1143G>T
  hgvsp: ENSP00000379005.2:p.Glu381Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1116G>T
  hgvsp: ENSP00000401875.2:p.Glu372Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1272G>T
  hgvsp: ENSP00000379008.2:p.Glu424Asp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1023G>T
  hgvsp: ENSP00000379004.1:p.Glu341Asp
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11699
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2004
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27759
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12752
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu424Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

17-18918501-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918501
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918501
    reference: chr 17
allele count: 2
allele frequency: 1.776766994776305e-5
allele num: 112564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1029G>A
  hgvsp: ENST00000395642.1:c.1029G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1278G>A
  hgvsp: ENST00000395647.2:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1029G>A
  hgvsp: ENST00000317977.6:c.1029G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1149G>A
  hgvsp: ENST00000395643.2:c.1149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1122G>A
  hgvsp: ENST00000417251.2:c.1122G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1230G>A
  hgvsp: ENST00000395645.3:c.1230G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10781
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22069
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Leu426Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

17-18918502-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918502
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918502
    reference: chr 17
allele count: 1
allele frequency: 9.277298450691159e-6
allele num: 107790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1231C>T
  hgvsp: ENST00000395645.3:c.1231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1030C>T
  hgvsp: ENST00000395642.1:c.1030C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1123C>T
  hgvsp: ENST00000417251.2:c.1123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1279C>T
  hgvsp: ENST00000395647.2:c.1279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1150C>T
  hgvsp: ENST00000395643.2:c.1150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1030C>T
  hgvsp: ENST00000317977.6:c.1030C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3293
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3048
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17218
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1821
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu427Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ

17-18918510-A-ACGGTACAGGGGTGGGGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918510
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918528
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 81200
alternate allele: ACGGTACAGGGGTGGGGGC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: inframe insertion
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22055
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

17-18918510-A-ACGGTACGGGGGTGGGGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918510
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918528
    reference: chr 17
allele count: 4322
allele frequency: 5.322660098522167e-2
allele num: 81200
alternate allele: ACGGTACGGGGGTGGGGGC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 13241
  bin: 1.75e1
  variant carriers: 1252
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 3.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 2.5e0
  variant carriers: 4216
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 7.5e0
  variant carriers: 2549
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.75e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 18522
  bin: 1.25e1
  variant carriers: 2338
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.25e1
  variant carriers: 517
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.25e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 1.25e1
  variant carriers: 2013
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 9.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 22055
  bin: 2.25e1
  variant carriers: 961
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 6.75e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 7891
  bin: 6.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 3.25e1
  variant carriers: 332
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 4920
  bin: 2.5e0
  variant carriers: 1050
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 8.25e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 5299
  bin: 7.5e0
  variant carriers: 1454
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 1.75e1
  variant carriers: 2208
num of homozygotes: 1378
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-18918510-A-ATGGTACGGGGGTGGGGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918510
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918528
    reference: chr 17
allele count: 1
allele frequency: 1.231527093596059e-5
allele num: 81200
alternate allele: ATGGTACGGGGGTGGGGGC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4920
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5299
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22055
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly429_Arg430insTrpTyrGlyGlyGlyGly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

17-18918511-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918511
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918511
    reference: chr 17
allele count: 10
allele frequency: 1.117268501966393e-4
allele num: 89504
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1039C>T
  hgvsp: ENSP00000379004.1:p.Arg347Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1288C>T
  hgvsp: ENSP00000379008.2:p.Arg430Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1240C>T
  hgvsp: ENSP00000379007.3:p.Arg414Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1039C>T
  hgvsp: ENSP00000324346.6:p.Arg347Cys
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1132C>T
  hgvsp: ENSP00000401875.2:p.Arg378Trp
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1159C>T
  hgvsp: ENSP00000379005.2:p.Arg387Trp
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18176
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15481
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24571
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4797
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg430Trp
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

17-18918512-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918512
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918512
    reference: chr 17
allele count: 2
allele frequency: 2.036908787224508e-5
allele num: 98188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133G>A
  hgvsp: ENSP00000401875.2:p.Arg378Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289G>A
  hgvsp: ENSP00000379008.2:p.Arg430Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160G>A
  hgvsp: ENSP00000379005.2:p.Arg387Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241G>A
  hgvsp: ENSP00000379007.3:p.Arg414Gln
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040G>A
  hgvsp: ENSP00000379004.1:p.Arg347His
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040G>A
  hgvsp: ENSP00000324346.6:p.Arg347His
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16659
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19056
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4098
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6682
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7466
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg430Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

17-18918512-GGTACGGGGGTGGGGGCCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918512
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918494
    reference: chr 17
allele count: 2
allele frequency: 2.036908787224508e-5
allele num: 98188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16659
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7466
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28545
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4098
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5597
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1289+16_1289+33delCCAGTACGGGGGTGGGGG
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: GGTACGGGGGTGGGGGCCA
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-18918513-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918513
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918513
    reference: chr 17
allele count: 1
allele frequency: 1.040886002165043e-5
allele num: 96072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+1G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+1G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+1G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+1G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+1G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+1G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16729
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5682
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28268
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6409
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7325
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1289+1G>A
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

17-18918515-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918515
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918515
    reference: chr 17
allele count: 1
allele frequency: 1.079913606911447e-5
allele num: 92600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+3A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+3A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+3A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+3A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+3A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+3A>G
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16577
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5410
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8081
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5683
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1289+3A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-18918515-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918515
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918514
    reference: chr 17
allele count: 1
allele frequency: 1.079913606911447e-5
allele num: 92600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+4delC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+4delC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+4delC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+4delC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+4delC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+4delC
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16577
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8081
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27728
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
hgvs: c.1289+4delC
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: AC
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum

17-18918516-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918516
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918516
    reference: chr 17
allele count: 5
allele frequency: 5.859191900253117e-5
allele num: 85336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+4C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+4C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+4C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+4C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+4C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+4C>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18678
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8886
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4099
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5348
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1289+4C>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD

17-18918517-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918517
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918517
    reference: chr 17
allele count: 1
allele frequency: 1.136105430583958e-5
allele num: 88020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+5G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+5G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+5G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+5G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+5G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+5G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17978
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27043
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9920
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1289+5G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

17-18918517-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918517
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918517
    reference: chr 17
allele count: 2
allele frequency: 2.272210861167916e-5
allele num: 88020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+5G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+5G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+5G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+5G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+5G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+5G>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17978
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27043
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5635
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9920
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4409
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1289+5G>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

17-18918518-G-GGGGTGGGGGCCGGTACGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918518
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918536
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 88494
alternate allele: GGGGTGGGGGCCGGTACGA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8995
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10031
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5647
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
hgvs: c.1289+17_1289+18insGGTACGAGGGTGGGGGCC
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

17-18918519-G-GGGTGGGGGCCGGTACGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918519
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918537
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 81056
alternate allele: GGGTGGGGGCCGGTACGGT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5363
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1533
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24978
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12632
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1289+17_1289+18insGGTACGGTGGTGGGGGCC
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

17-18918520-G-GGTGGGGGCCGGTACGGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918520
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918538
    reference: chr 17
allele count: 1
allele frequency: 1.413987160996578e-5
allele num: 70722
alternate allele: GGTGGGGGCCGGTACGGGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12179
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14034
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21224
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15183
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4827
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

17-18918521-G-GTGGGGGCCGGTACGGGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918521
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918539
    reference: chr 17
allele count: 2
allele frequency: 3.022700480609376e-5
allele num: 66166
alternate allele: GTGGGGGCCGGTACGGGGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13035
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16103
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16278
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4025
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

17-18918522-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918522
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918522
    reference: chr 17
allele count: 1
allele frequency: 1.966104360819472e-5
allele num: 50862
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+10T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+10T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+10T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+10T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+10T>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+10T>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13556
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7856
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17208
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16426
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3043
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD

17-18918524-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918524
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918524
    reference: chr 17
allele count: 17
allele frequency: 3.638075671973977e-4
allele num: 46728
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+12G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+12G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+12G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+12G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+12G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+12G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17739
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

17-18918524-G-GGGGCCGGTACGGGGGTGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918524
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918542
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 46728
alternate allele: GGGGCCGGTACGGGGGTGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20926
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15463
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

17-18918525-G-GGGCCGGTACGGGGGTGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918525
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918543
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 32444
alternate allele: GGGCCGGTACGGGGGTGGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15063
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20145
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4067
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5438
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

17-18918525-G-GGGCCGGTACGGGGGTGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918525
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918543
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 32444
alternate allele: GGGCCGGTACGGGGGTGGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4067
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4707
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5438
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10317
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

17-18918526-G-GGCCGGTACGGGGGTGGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918526
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918544
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 32532
alternate allele: GGCCGGTACGGGGGTGGGA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3926
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15141
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3980
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4669
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5427
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

17-18918526-G-GGCCGGTACGGGGGTGGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918526
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918544
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 32532
alternate allele: GGCCGGTACGGGGGTGGGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3926
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15141
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5427
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10382
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4669
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

17-18918528-C-CCGGTACGGGGGTGGGGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918528
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918546
    reference: chr 17
allele count: 1
allele frequency: 3.150797151679375e-5
allele num: 31738
alternate allele: CCGGTACGGGGGTGGGGGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9449
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4491
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5390
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20195
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4478
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

17-18918530-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918530
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918530
    reference: chr 17
allele count: 12592
allele frequency: 4.025318074291925e-1
allele num: 31282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+18A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+18A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+18A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+18A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+18A>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+18A>G
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 13613
  bin: 1.25e1
  variant carriers: 7146
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 2.25e1
  variant carriers: 560
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 2.5e0
  variant carriers: 2777
genotype depth: GenotypeDepth
  all individuals: 16897
  bin: 7.5e0
  variant carriers: 9986
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 1.75e1
  variant carriers: 2312
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 2.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 4.75e1
  variant carriers: 528
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.25e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 6.75e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 4289
  bin: 1.75e1
  variant carriers: 3407
genotype quality: GenotypeQuality
  all individuals: 3269
  bin: 1.25e1
  variant carriers: 1805
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.75e1
  variant carriers: 370
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.75e1
  variant carriers: 182
genotype quality: GenotypeQuality
  all individuals: 2663
  bin: 3.25e1
  variant carriers: 1936
genotype quality: GenotypeQuality
  all individuals: 7005
  bin: 7.5e0
  variant carriers: 1316
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 1125
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 6.25e1
  variant carriers: 191
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.25e1
  variant carriers: 284
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 9.25e1
  variant carriers: 384
num of homozygotes: 3573
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-18918531-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918531
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918531
    reference: chr 17
allele count: 147
allele frequency: 7.922819877115447e-3
allele num: 18554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+19G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+19G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+19G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+19G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+19G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+19G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14490
  bin: 7.5e0
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 8335
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 1.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10701
  bin: 1.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21123
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5948
  bin: 2.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3256
  bin: 1.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 9.75e1
  variant carriers: 138
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 3
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-18918533-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918533
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918533
    reference: chr 17
allele count: 1
allele frequency: 7.270612185546023e-5
allele num: 13754
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+21A>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+21A>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+21A>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+21A>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+21A>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+21A>C
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9077
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9082
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3282
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16930
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5942
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

17-18918534-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918534
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918535
    reference: chr 17
allele count: 1
allele frequency: 1.682935038707506e-4
allele num: 5942
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+27dupG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+27dupG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+27dupG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+27dupG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+27dupG
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+27dupG
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8078
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11712
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14842
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2291
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

17-18918534-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918534
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918534
    reference: chr 17
allele count: 14
allele frequency: 2.356109054190508e-3
allele num: 5942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+22C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+22C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+22C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+22C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+22C>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+22C>G
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8078
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9294
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14842
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2291
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11712
  bin: 7.5e0
  variant carriers: 3
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum

17-18918534-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918534
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918534
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 5942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+22C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+22C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+22C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+22C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+22C>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+22C>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9294
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8078
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14842
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11712
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

17-18918535-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918535
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918535
    reference: chr 17
allele count: 1
allele frequency: 5.519372999227288e-5
allele num: 18118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+23G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+23G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+23G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+23G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+23G>C
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+23G>C
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2898
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5227
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13860
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

17-18918537-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918537
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918537
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 18784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+25G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+25G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+25G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+25G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+25G>T
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+25G>T
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11863
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2571
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14165
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3892
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

17-18918539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918539
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918539
    reference: chr 17
allele count: 1
allele frequency: 5.60475283040018e-5
allele num: 17842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+27G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+27G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+27G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+27G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+27G>A
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+27G>A
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5117
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2614
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13965
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

17-18918540-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918540
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918540
    reference: chr 17
allele count: 73
allele frequency: 3.05439330543933e-2
allele num: 2390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+28T>G
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+28T>G
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 12374
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 1.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 7.5e0
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19686
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8671
  bin: 7.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 11
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

17-18918540-T-TGGGGGCAAGTAGGGGGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918540
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918558
    reference: chr 17
allele count: 1
allele frequency: 4.184100418410042e-4
allele num: 2390
alternate allele: TGGGGGCAAGTAGGGGGGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 12374
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8671
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19686
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

17-18918545-G-GCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18918545
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 18918547
    reference: chr 17
allele count: 1
allele frequency: 7.739938080495357e-5
allele num: 12920
alternate allele: GCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000324346
  ensembl transcript: ENST00000317977
  gene symbol: SLC5A10
  hgvsc: ENST00000317977.6:c.1040+33_1040+34insCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379004
  ensembl transcript: ENST00000395642
  gene symbol: SLC5A10
  hgvsc: ENST00000395642.1:c.1040+33_1040+34insCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000401875
  ensembl transcript: ENST00000417251
  gene symbol: SLC5A10
  hgvsc: ENST00000417251.2:c.1133+33_1133+34insCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379008
  ensembl transcript: ENST00000395647
  gene symbol: SLC5A10
  hgvsc: ENST00000395647.2:c.1289+33_1289+34insCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379007
  ensembl transcript: ENST00000395645
  gene symbol: SLC5A10
  hgvsc: ENST00000395645.3:c.1241+33_1241+34insCC
  variant of: http://identifiers.org/hgnc/23155
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154025
  ensembl protein: ENSP00000379005
  ensembl transcript: ENST00000395643
  gene symbol: SLC5A10
  hgvsc: ENST00000395643.2:c.1160+33_1160+34insCC
  variant of: http://identifiers.org/hgnc/23155
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16806
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9819
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43012
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.743566e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.824e1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.502e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

VQSLOD
type: SiteQuality
SIO_000300: -2.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-1

GenotypeQuality
all individuals: 9538
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42977
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2107
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505661286437003e-5
allele num: 66416
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.106e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.972e0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

DP
type: SiteQuality
SIO_000300: 1.743537e6

QD
type: SiteQuality
SIO_000300: 7.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.184e0

VQSLOD
type: SiteQuality
SIO_000300: -2.574e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 43016
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2104
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.665571235260003e-5
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.952e0

DP
type: SiteQuality
SIO_000300: 1.743681e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.062e0

VQSLOD
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.142e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e-2

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
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GenotypeQuality
all individuals: 2359
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9525
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505479947007106e-5
allele num: 66424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.742e0

VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

DP
type: SiteQuality
SIO_000300: 1.744197e6

MQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9525
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 9.75e1
variant carriers: 7

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.242424242424243e-4
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.742e0

MQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

QD
type: SiteQuality
SIO_000300: 1.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

DP
type: SiteQuality
SIO_000300: 1.744197e6

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9524
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2104
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505389293671343e-5
allele num: 66428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

QD
type: SiteQuality
SIO_000300: 1.435e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.22e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

DP
type: SiteQuality
SIO_000300: 1.743811e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.68e0

GenotypeQuality
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43043
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
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GenotypeQuality
all individuals: 2104
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.021557174685374e-5
allele num: 66428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.22e-1

QD
type: SiteQuality
SIO_000300: 1.435e1

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 1.743811e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

VQSLOD
type: SiteQuality
SIO_000300: 2.68e0

MQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2102
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variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
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variant carriers: 3

GenotypeQuality
all individuals: 89
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GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010869237948996e-5
allele num: 66426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 4.273e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.304e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

DP
type: SiteQuality
SIO_000300: 1.743538e6

GenotypeQuality
all individuals: 2098
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 2357
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9519
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.524390243902439e-4
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

QD
type: SiteQuality
SIO_000300: 2.848e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.01e-1

FS
type: SiteQuality
SIO_000300: 1.051e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: -3.374e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.554e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.61e-1

DP
type: SiteQuality
SIO_000300: 1.743583e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9528
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.85e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.796e0

QD
type: SiteQuality
SIO_000300: 6.54e0

MQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.358e0

DP
type: SiteQuality
SIO_000300: 1.743604e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 390
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GenotypeQuality
all individuals: 1071
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.21e-2

QD
type: SiteQuality
SIO_000300: 1.787e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.7428e6

MQRankSum
type: SiteQuality
SIO_000300: -1.353e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.867000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.527e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 18
bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 9463
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.054820529821283e-4
allele num: 66362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 4.719e0

DP
type: SiteQuality
SIO_000300: 1.741427e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.086e0

VQSLOD
type: SiteQuality
SIO_000300: -1.683e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 2.737e1

GenotypeQuality
all individuals: 385
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9407
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511578692786746e-5
allele num: 66156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.99e-1

QD
type: SiteQuality
SIO_000300: 1.208e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.38e-1

DP
type: SiteQuality
SIO_000300: 1.73479e6

FS
type: SiteQuality
SIO_000300: 2.687e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.884e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.185e0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.680555555555556e-5
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 1.73273e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

FS
type: SiteQuality
SIO_000300: 1.283e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.32e0

QD
type: SiteQuality
SIO_000300: 1.071e1

VQSLOD
type: SiteQuality
SIO_000300: 4.29e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 1763
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41725
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.844457570387872e-5
allele num: 10158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.47e0

FS
type: SiteQuality
SIO_000300: 2.633e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.151e1

MQRankSum
type: SiteQuality
SIO_000300: -1.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.719261e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.95335046451868e-4
allele num: 10118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.414e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 4.768e0

DP
type: SiteQuality
SIO_000300: 1.713973e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526717557251908e-5
allele num: 65500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.961e0

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

DP
type: SiteQuality
SIO_000300: 1.711185e6

QD
type: SiteQuality
SIO_000300: 1.673e1

FS
type: SiteQuality
SIO_000300: 2.907e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.78e-1

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.001001001001001e-4
allele num: 9990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65152
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.107243190423842e-5
allele num: 16374
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.472e1

DP
type: SiteQuality
SIO_000300: 1.696847e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.032e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 9.558e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 259
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40615
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.107243190423842e-5
allele num: 16374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535013661621589e-5
allele num: 65146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6304
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.334267040149393e-4
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

QD
type: SiteQuality
SIO_000300: 9.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.831e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

FS
type: SiteQuality
SIO_000300: 4.013e0

VQSLOD
type: SiteQuality
SIO_000300: 5.26e-1

DP
type: SiteQuality
SIO_000300: 1.696407e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 434
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 40008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3348
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64924
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.009693053311793e-4
allele num: 9904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6262
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.087e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.989e1

DP
type: SiteQuality
SIO_000300: 1.684781e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

QD
type: SiteQuality
SIO_000300: 6.82e0

GenotypeQuality
all individuals: 516
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39420
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6240
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.733e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.674109e6

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.206e1

GenotypeQuality
all individuals: 2160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8759
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1902
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variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.7572633552015e-3
allele num: 8536
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

QD
type: SiteQuality
SIO_000300: 1.203e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.921e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 1.668253e6

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8759
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4168
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546886118243975e-5
allele num: 64646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.668253e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.921e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

QD
type: SiteQuality
SIO_000300: 1.203e1

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37662
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.112065477857654e-5
allele num: 64266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.189650903689032e-5
allele num: 16156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

QD
type: SiteQuality
SIO_000300: 1.154e1

FS
type: SiteQuality
SIO_000300: 1.239e0

DP
type: SiteQuality
SIO_000300: 1.641108e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.457e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.899999999999999e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.188884762965714e-5
allele num: 16158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64246
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 6.732e0

DP
type: SiteQuality
SIO_000300: 1.639656e6

VQSLOD
type: SiteQuality
SIO_000300: -1.117e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.648e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.98e-1

QD
type: SiteQuality
SIO_000300: 1.147e1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

GenotypeQuality
all individuals: 684
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2059
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64004
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.038421599169263e-4
allele num: 9630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16084
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.98e-1

MQ
type: SiteQuality
SIO_000300: 5.904e1

FS
type: SiteQuality
SIO_000300: 7.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

QD
type: SiteQuality
SIO_000300: 1.261e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: 3.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

DP
type: SiteQuality
SIO_000300: 1.620635e6

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1821
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2059
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6148
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8163
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 6.562089869383164e-4
allele num: 64004
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.64257555847569e-4
allele num: 6088
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.98e-1

MQ
type: SiteQuality
SIO_000300: 5.904e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

FS
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 1.620635e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

QD
type: SiteQuality
SIO_000300: 1.261e1

VQSLOD
type: SiteQuality
SIO_000300: 3.46e0

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1804
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variant carriers: 0

GenotypeQuality
all individuals: 6593
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 955
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variant carriers: 0

GenotypeQuality
all individuals: 408
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variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6086
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.232859636000998e-5
allele num: 16044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.951e0

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.1e-1

DP
type: SiteQuality
SIO_000300: 1.608785e6

QD
type: SiteQuality
SIO_000300: 1.162e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

MQ
type: SiteQuality
SIO_000300: 5.999e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.88e0

GenotypeQuality
all individuals: 978
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
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variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.054629824931449e-4
allele num: 9482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

FS
type: SiteQuality
SIO_000300: 1.1953e1

VQSLOD
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 1.576115e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7939
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.881349554747272e-4
allele num: 15946
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.574505605239955e-5
allele num: 63512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11290
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 1.576115e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

FS
type: SiteQuality
SIO_000300: 1.1953e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.25e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 34687
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.75e1
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GenotypeQuality
all individuals: 879
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1960
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.103049421661409e-4
allele num: 9510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6018
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

FS
type: SiteQuality
SIO_000300: 1.952e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.15e-1

QD
type: SiteQuality
SIO_000300: 6.75e0

DP
type: SiteQuality
SIO_000300: 1.573855e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.320000000000001e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
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variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
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variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8028
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.051524710830704e-4
allele num: 9510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63568
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.75e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

FS
type: SiteQuality
SIO_000300: 1.952e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.320000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

DP
type: SiteQuality
SIO_000300: 1.573855e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.28e-1

GenotypeQuality
all individuals: 202
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.5e0
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GenotypeQuality
all individuals: 1388
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variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 32911
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GenotypeQuality
all individuals: 228
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1899
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.062022090059473e-4
allele num: 9416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.462976105985332e-4
allele num: 8454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581777918380259e-5
allele num: 63220
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

QD
type: SiteQuality
SIO_000300: 9.92e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

FS
type: SiteQuality
SIO_000300: 9.573e0

DP
type: SiteQuality
SIO_000300: 1.547671e6

GenotypeQuality
all individuals: 86
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1671
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31280
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.77999288002848e-4
allele num: 11236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63008
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.966e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.345e0

FS
type: SiteQuality
SIO_000300: 1.0265e1

QD
type: SiteQuality
SIO_000300: 1.191e1

DP
type: SiteQuality
SIO_000300: 1.517488e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

GenotypeQuality
all individuals: 332
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6718
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.368615462998345e-5
allele num: 15702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62580
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.886e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

DP
type: SiteQuality
SIO_000300: 1.464577e6

FS
type: SiteQuality
SIO_000300: 1.624e0

QD
type: SiteQuality
SIO_000300: 1.308e1

MQRankSum
type: SiteQuality
SIO_000300: 8.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.612e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.245e0

GenotypeQuality
all individuals: 596
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2927
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16051
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.229035487100004e-5
allele num: 61938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5668
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.723e0

FS
type: SiteQuality
SIO_000300: 8.804e0

VQSLOD
type: SiteQuality
SIO_000300: -9.810000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.599e1

DP
type: SiteQuality
SIO_000300: 1.395365e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

GenotypeQuality
all individuals: 1465
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59072
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.113833815994654e-4
allele num: 8978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

QD
type: SiteQuality
SIO_000300: 2.397e1

VQSLOD
type: SiteQuality
SIO_000300: -2.75e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.021e0

DP
type: SiteQuality
SIO_000300: 1.361996e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.634e0

FS
type: SiteQuality
SIO_000300: 2.076e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 5299
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2651
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4920
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1301
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9424
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.805e1

FS
type: SiteQuality
SIO_000300: 3.952e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.35627e5

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 4.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.557e-1

GenotypeQuality
all individuals: 1301
bin: 3.75e1
variant carriers: 257

GenotypeQuality
all individuals: 4302
bin: 2.75e1
variant carriers: 448

GenotypeQuality
all individuals: 402
bin: 4.75e1
variant carriers: 146

GenotypeQuality
all individuals: 258
bin: 7.75e1
variant carriers: 55

GenotypeQuality
all individuals: 1588
bin: 9.75e1
variant carriers: 1532

GenotypeQuality
all individuals: 451
bin: 4.25e1
variant carriers: 159

GenotypeQuality
all individuals: 269
bin: 5.25e1
variant carriers: 111

European (Finnish)
type: Population
allele count: 116
allele frequency: 2.963719979560552e-2
allele num: 3914
num of homozygotes: 44

South Asian
type: Population
allele count: 338
allele frequency: 2.981651376146789e-2
allele num: 11336
num of homozygotes: 32

European (Non-Finnish)
type: Population
allele count: 3317
allele frequency: 8.154685809814141e-2
allele num: 40676
num of homozygotes: 1243

African
type: Population
allele count: 139
allele frequency: 1.874831400053952e-2
allele num: 7414
num of homozygotes: 9

Latino
type: Population
allele count: 276
allele frequency: 2.928692699490662e-2
allele num: 9424
num of homozygotes: 37

Other
type: Population
allele count: 42
allele frequency: 7.526881720430108e-2
allele num: 558
num of homozygotes: 8

East Asian
type: Population
allele count: 94
allele frequency: 1.193196242701193e-2
allele num: 7878
num of homozygotes: 5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

DP
type: SiteQuality
SIO_000300: 9.35627e5

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 3.952e0

QD
type: SiteQuality
SIO_000300: 4.54e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.557e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 3120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3914
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.821453775582216e-5
allele num: 11336
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.557e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 3.952e0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

QD
type: SiteQuality
SIO_000300: 4.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 5.805e1

DP
type: SiteQuality
SIO_000300: 9.35627e5

GenotypeQuality
all individuals: 776
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4343
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6211
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1925
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 8447
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 7
allele frequency: 7.10804224207961e-4
allele num: 9848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.3607836485455e-5
allele num: 47164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7378
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-2

DP
type: SiteQuality
SIO_000300: 1.082861e6

FS
type: SiteQuality
SIO_000300: 2.323e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

GenotypeQuality
all individuals: 28545
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5597
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 448
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.872589041608928e-5
allele num: 53402
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.345379756133391e-5
allele num: 13614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

DP
type: SiteQuality
SIO_000300: 9.96865e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

GenotypeQuality
all individuals: 286
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6682
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
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European (Finnish)
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allele frequency: 0.0e0
allele num: 4620
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.745178083217857e-5
allele num: 53402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7472
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

MQ
type: SiteQuality
SIO_000300: 5.927e1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

FS
type: SiteQuality
SIO_000300: 9.97e-1

DP
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SIO_000300: 9.96865e5

QD
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13372
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.921008145074535e-5
allele num: 52056
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.497e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.74e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.9288e1

VQSLOD
type: SiteQuality
SIO_000300: -2.5e0

DP
type: SiteQuality
SIO_000300: 9.74557e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.187e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.999120387029707e-5
allele num: 50022
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 7142
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4292
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

MQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 7.014e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.91e-1

QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.72e-2

DP
type: SiteQuality
SIO_000300: 9.52731e5

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.999120387029707e-5
allele num: 50022
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4292
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

BaseQRankSum
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QD
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.72e-2

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.925e1

DP
type: SiteQuality
SIO_000300: 9.52731e5

FS
type: SiteQuality
SIO_000300: 7.014e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.91e-1

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7522
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 8.692250858359773e-5
allele num: 46018
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6786
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.041232819658476e-4
allele num: 9604
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.33378e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.01e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.873e0

QD
type: SiteQuality
SIO_000300: 1.346e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3852
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6796
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.146659797355315e-5
allele num: 46584
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1473e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 9.01157e5

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.92e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.835e0

BaseQRankSum
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SIO_000300: -1.859e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.44e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 6796
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 3852
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 12768
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46584
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.621919244887258e-4
allele num: 7628
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 614
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DP
type: SiteQuality
SIO_000300: 9.01157e5

InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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FS
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46854
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3876
num of homozygotes: 0

Other
type: Population
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allele num: 624
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DP
type: SiteQuality
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FS
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
type: SiteQuality
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MQ
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
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South Asian
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 9378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 41520
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European (Finnish)
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QD
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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num of homozygotes: 0

East Asian
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South Asian
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European (Non-Finnish)
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allele frequency: 2.926886378270796e-5
allele num: 34166
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 486
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8714
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2328
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.12e-2

MQ
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 440
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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allele frequency: 6.154982458299993e-5
allele num: 32494
num of homozygotes: 0

South Asian
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European (Finnish)
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East Asian
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.246e0

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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ClippingRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.37e-2

MQ
type: SiteQuality
SIO_000300: 5.705e1

GenotypeQuality
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2749
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.825554705432287e-5
allele num: 26140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.569999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.109e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.37e-1

DP
type: SiteQuality
SIO_000300: 7.82683e5

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 7.432e0

MQ
type: SiteQuality
SIO_000300: 5.624e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.734e0

QD
type: SiteQuality
SIO_000300: 1.437e1

GenotypeQuality
all individuals: 15463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20926
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3314
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1060
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.517911353976928e-4
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 2.456248081056187e-3
allele num: 6514
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.833e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.48e-1

DP
type: SiteQuality
SIO_000300: 7.00855e5

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.89e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 2.571e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 1.101e1

GenotypeQuality
all individuals: 2384
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3314
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18766
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.00855e5

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.89e-2

FS
type: SiteQuality
SIO_000300: 2.571e0

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.48e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.98e-1

QD
type: SiteQuality
SIO_000300: 1.101e1

GenotypeQuality
all individuals: 4707
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10317
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 6.4132e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.53e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.695e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-1

FS
type: SiteQuality
SIO_000300: 7.292e0

MQ
type: SiteQuality
SIO_000300: 5.643e1

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20145
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5088
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.292e0

MQ
type: SiteQuality
SIO_000300: 5.643e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.53e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.695e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 6.4132e5

GenotypeQuality
all individuals: 10382
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.604e1

QD
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.47e-2

DP
type: SiteQuality
SIO_000300: 6.40011e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

GenotypeQuality
all individuals: 3980
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 862
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5106
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.40011e5

MQ
type: SiteQuality
SIO_000300: 5.604e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.47e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12060
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.275830678197542e-4
allele num: 4394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5032
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

QD
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.74e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.34196e5

MQ
type: SiteQuality
SIO_000300: 5.734e1

GenotypeQuality
all individuals: 7726
bin: 2.25e1
variant carriers: 3318

GenotypeQuality
all individuals: 431
bin: 5.25e1
variant carriers: 351

GenotypeQuality
all individuals: 10301
bin: 2.5e0
variant carriers: 1018

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 268

GenotypeQuality
all individuals: 648
bin: 4.25e1
variant carriers: 461

GenotypeQuality
all individuals: 5648
bin: 9.75e1
variant carriers: 5633

GenotypeQuality
all individuals: 2513
bin: 2.75e1
variant carriers: 1393

African
type: Population
allele count: 374
allele frequency: 1.244178310046574e-1
allele num: 3006
num of homozygotes: 23

European (Finnish)
type: Population
allele count: 630
allele frequency: 6.730769230769231e-1
allele num: 936
num of homozygotes: 203

East Asian
type: Population
allele count: 223
allele frequency: 5.286865813181603e-2
allele num: 4218
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 9250
allele frequency: 6.503093363329584e-1
allele num: 14224
num of homozygotes: 3106

Other
type: Population
allele count: 86
allele frequency: 4.623655913978494e-1
allele num: 186
num of homozygotes: 26

Latino
type: Population
allele count: 1130
allele frequency: 2.790123456790123e-1
allele num: 4050
num of homozygotes: 119

South Asian
type: Population
allele count: 899
allele frequency: 1.928356928356928e-1
allele num: 4662
num of homozygotes: 93

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.002e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 2.5489e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 2.841e1

DP
type: SiteQuality
SIO_000300: 5.13068e5

GenotypeQuality
all individuals: 28
bin: 8.25e1
variant carriers: 12

GenotypeQuality
all individuals: 40
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 10

GenotypeQuality
all individuals: 306
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1358
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2339
bin: 1.75e1
variant carriers: 9

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3872
num of homozygotes: 0

African
type: Population
allele count: 141
allele frequency: 5.914429530201342e-2
allele num: 2384
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.139717425431711e-4
allele num: 6370
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 1.915708812260536e-3
allele num: 2088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.88e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.939e-1

FS
type: SiteQuality
SIO_000300: 4.538e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 3.9153e5

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 183
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4187
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.360215053763441e-4
allele num: 2976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 3.39707e5

QD
type: SiteQuality
SIO_000300: 2.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.393e0

VQSLOD
type: SiteQuality
SIO_000300: -2.683e0

MQ
type: SiteQuality
SIO_000300: 5.816e1

MQRankSum
type: SiteQuality
SIO_000300: -1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.737e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.43e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1052
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.369426751592356e-4
allele num: 1570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.25e-1

DP
type: SiteQuality
SIO_000300: 3.13793e5

FS
type: SiteQuality
SIO_000300: 1.6098e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

QD
type: SiteQuality
SIO_000300: 3.73e0

VQSLOD
type: SiteQuality
SIO_000300: -1.339e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.753e1

GenotypeQuality
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 60
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2026
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 4.491017964071856e-3
allele num: 668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.369426751592356e-4
allele num: 1570
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.85171102661597e-3
allele num: 1052
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.694581280788177e-3
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 2.259887005649718e-3
allele num: 1770
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.753e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.339e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

FS
type: SiteQuality
SIO_000300: 1.6098e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 3.73e0

DP
type: SiteQuality
SIO_000300: 3.13793e5

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

GenotypeQuality
all individuals: 2291
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1052
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

QD
type: SiteQuality
SIO_000300: 3.73e0

FS
type: SiteQuality
SIO_000300: 1.6098e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.753e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.339e-1

DP
type: SiteQuality
SIO_000300: 3.13793e5

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.794687724335966e-4
allele num: 5572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2020
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.318e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 5.395e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

DP
type: SiteQuality
SIO_000300: 2.94936e5

QD
type: SiteQuality
SIO_000300: 7.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.56e-1

GenotypeQuality
all individuals: 2320
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1517
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.89536e5

QD
type: SiteQuality
SIO_000300: 3.097e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.57e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.395e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 296
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4035
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.786352268667381e-4
allele num: 5598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4714
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

QD
type: SiteQuality
SIO_000300: 1.049e1

FS
type: SiteQuality
SIO_000300: 2.41e0

VQSLOD
type: SiteQuality
SIO_000300: -1.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.92e-2

MQ
type: SiteQuality
SIO_000300: 4.712e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.82851e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 876
bin: 1.75e1
variant carriers: 11

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1268
bin: 2.25e1
variant carriers: 10

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1304
bin: 1.25e1
variant carriers: 11

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 3.669724770642202e-2
allele num: 218
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 2.136752136752137e-2
allele num: 468
num of homozygotes: 0

East Asian
type: Population
allele count: 20
allele frequency: 2.923976608187134e-2
allele num: 684
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 4.895104895104895e-2
allele num: 286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 2.8328611898017e-2
allele num: 706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 8.333333333333333e-2
allele num: 12
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

DP
type: SiteQuality
SIO_000300: 2.60217e5

FS
type: SiteQuality
SIO_000300: 3.3473e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQ
type: SiteQuality
SIO_000300: 5.662e1

VQSLOD
type: SiteQuality
SIO_000300: -9.871e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.089e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.65e0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.41643059490085e-3
allele num: 706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.089e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.871e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.60217e5

FS
type: SiteQuality
SIO_000300: 3.3473e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

MQ
type: SiteQuality
SIO_000300: 5.662e1

QD
type: SiteQuality
SIO_000300: 1.65e0