19-36233749-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36233749
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36233749
    reference: chr 19
allele count: 2
allele frequency: 1.726817475392851e-5
allele num: 115820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*327-229C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1702C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.1444C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*223-229C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.579-45C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*328-45C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.462-45C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.2267C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*324-45C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*621-45C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*223-229C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*223-229C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.704-45C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.404-45C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.472-45C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.970-45C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

19-36233754-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36233754
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36233754
    reference: chr 19
allele count: 2
allele frequency: 1.731871633674512e-5
allele num: 115482
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.404-50T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*223-234T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*223-234T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.1439T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.579-50T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.704-50T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*328-50T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*327-234T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*223-234T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.2262T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1697T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.462-50T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.970-50T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*621-50T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*324-50T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.472-50T>C
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

19-36234086-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234086
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234086
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*590G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.404-382G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*223-566G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*293G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.970-382G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1756G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*223-566G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.472-382G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*223-566G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1365G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*296G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.462-382G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.1107G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1930G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.704-382G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*328-382G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.579-382G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

19-36234152-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234152
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234152
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 48
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+558A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.472-448A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*328-448A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+558A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.1041A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.970-448A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1690A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.462-448A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*524A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.404-448A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.704-448A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+558A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.579-448A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1344+45A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*272+45A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1864A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*273-43A>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

19-36234170-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234170
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234170
    reference: chr 19
allele count: 6
allele frequency: 4.918032786885246e-2
allele num: 122
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1846T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*272+27T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.579-466T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+540T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.704-466T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.1023T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*506T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*272+27T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.472-466T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+540T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.404-466T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*328-466T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.970-466T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.462-466T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+540T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1672T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1344+27T>C
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

19-36234193-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234193
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234193
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+517C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*272+4C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.1000C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*328-489C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.579-489C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*272+4C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.970-489C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1344+4C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*483C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1649C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.472-489C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.462-489C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1823C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+517C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.404-489C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+517C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.704-489C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*272+4C>T
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

19-36234209-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234209
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234209
    reference: chr 19
allele count: 1
allele frequency: 2.590673575129534e-3
allele num: 386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+501C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1807C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*260C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+501C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*260C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+501C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+501C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1633C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1332C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+501C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*467C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.984C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+501C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+501C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+501C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+501C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+501C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

19-36234246-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234246
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234246
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+464G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+464G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+464G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+464G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1770G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1596G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.947G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+464G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+464G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+464G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+464G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+464G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+464G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*223G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-36234250-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234250
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234250
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-4G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+460G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-4G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+460G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+460G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1766G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1592G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-4G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+460G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.943G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+460G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+460G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+460G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+460G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-4G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+460G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+460G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*223-4G>A
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD

19-36234251-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234251
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234251
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-5C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1591C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1765C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-5C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-5C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-5C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+459C>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+459C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.942C>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*223-5C>G
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/19-36234274-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234274
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234272
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.917_918delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-30_1295-29delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-30_*223-29delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+434_461+435delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-30_*430-29delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1740_1741delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+434_471+435delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+434_969+435delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+434_703+435delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1566_1567delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-30_*223-29delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+434_*222+435delTT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+434_*222+435delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+434_*222+435delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+434_*327+435delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+434_578+435delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+434_403+435delTT
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: CAA
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/19-36234274-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234274
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234273
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-29delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+435delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-29delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.918delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+435delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+435delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+435delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1741delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+435delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+435delT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+435delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1567delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-29delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+435delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+435delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-29delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+435delT
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: CA
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-36234281-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234281
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234281
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 6
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+429T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-35T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+429T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+429T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.912T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-35T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+429T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+429T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1735T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+429T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1561T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-35T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+429T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+429T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-35T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+429T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+429T>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-36234286-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234286
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234286
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 4
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-40T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-40T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1556T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+424T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1730T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+424T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+424T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+424T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+424T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.907T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+424T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+424T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+424T>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-40T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-40T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+424T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+424T>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/19-36234287-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234287
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234288
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+422_*327+423insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-42_*223-41insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1554_1555insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-42_1295-41insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+422_461+423insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+422_471+423insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+422_703+423insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-42_*430-41insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1728_1729insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+422_969+423insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-42_*223-41insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+422_*222+423insG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+422_*222+423insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+422_578+423insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.905_906insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+422_*222+423insG
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+422_403+423insG
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/19-36234287-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234287
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234287
    reference: chr 19
allele count: 2
allele frequency: 2.0e-1
allele num: 10
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-41T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-41T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1555T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-41T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.906T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-41T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1729T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+423T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+423T>G
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 2.5e0
  variant carriers: 99
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-36234288-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234288
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234288
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+422T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1554T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.905T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-42T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-42T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+422T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-42T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1728T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-42T>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-36234292-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234292
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234292
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 6
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.901T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1724T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+418T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+418T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+418T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+418T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-46T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+418T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+418T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-46T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+418T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+418T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1550T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+418T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-46T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-46T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+418T>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/19-36234294-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234294
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234294
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 8
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+416T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+416T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+416T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1548T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+416T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.899T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1722T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+416T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+416T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+416T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+416T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-48T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-48T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+416T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-48T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-48T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+416T>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-36234295-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234295
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234295
    reference: chr 19
allele count: 2
allele frequency: 2.0e-1
allele num: 10
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1547T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*223-49T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*430-49T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+415T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.898T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+415T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*223-49T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1721T>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1295-49T>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 2.5e0
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-36234483-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234483
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234483
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 906
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1359C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1533C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.710C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+227C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+227C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+227C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

19-36234489-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234489
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234489
    reference: chr 19
allele count: 736
allele frequency: 3.625615763546798e-1
allele num: 2030
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1527A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1353A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.704A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+221A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+221A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+221A>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 77
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-36234512-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234512
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234512
    reference: chr 19
allele count: 1
allele frequency: 3.274394237066143e-4
allele num: 3054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1504G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+198G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.681G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1330G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+198G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+198G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-36234513-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234513
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234513
    reference: chr 19
allele count: 27
allele frequency: 8.098380323935212e-3
allele num: 3334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1503C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.680C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1329C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+197C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+197C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+197C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

19-36234519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234519
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234519
    reference: chr 19
allele count: 1
allele frequency: 2.685284640171858e-4
allele num: 3724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1323G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.674G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1497G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+191G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+191G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+191G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

19-36234543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234543
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234543
    reference: chr 19
allele count: 1
allele frequency: 1.616553507921112e-4
allele num: 6186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.650C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1473C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+167C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1299C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+167C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+167C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

19-36234574-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234574
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234574
    reference: chr 19
allele count: 1
allele frequency: 1.010509296685529e-4
allele num: 9896
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.619A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+136A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1268A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1442A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+136A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+136A>C
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/19-36234587-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234588
    reference: chr 19
allele count: 30
allele frequency: 1.704545454545454e-2
allele num: 1760
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.605dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1254dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+122dupT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1428dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+122dupT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+122dupT
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
num of homozygotes: 2
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/19-36234587-C-CAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234589
    reference: chr 19
allele count: 18
allele frequency: 1.022727272727273e-2
allele num: 1760
alternate allele: CAA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+121_*222+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1253_1254dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+121_403+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+121_*222+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+121_*222+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+121_969+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+121_*429+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+121_471+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+121_*327+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+121_1294+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+121_*222+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1427_1428dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+121_*222+122dupTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.604_605dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+121_703+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+121_461+122dupTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+121_578+122dupTT
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 7.5e0
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/19-36234587-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234586
    reference: chr 19
allele count: 145
allele frequency: 8.238636363636363e-2
allele num: 1760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.605delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1428delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+122delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1254delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+122delT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+122delT
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 7.5e0
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: CA
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/19-36234587-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234585
    reference: chr 19
allele count: 114
allele frequency: 6.477272727272727e-2
allele num: 1760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+121_1294+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+121_*222+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.604_605delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+121_*222+122delTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+121_969+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+121_471+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+121_*327+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+121_578+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+121_*222+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1427_1428delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+121_*222+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+121_403+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1253_1254delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+121_703+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+121_*222+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+121_*429+122delTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+121_461+122delTT
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12236
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: CAA
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/19-36234587-C-CAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234590
    reference: chr 19
allele count: 18
allele frequency: 1.022727272727273e-2
allele num: 1760
alternate allele: CAAA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+120_*222+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1426_1428dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+120_*327+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+120_403+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+120_1294+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+120_*222+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+120_*222+122dupTTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.603_605dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+120_471+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1252_1254dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+120_969+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+120_*429+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+120_461+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+120_*222+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+120_703+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+120_*222+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+120_578+122dupTTT
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 12236
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-36234587-CAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234584
    reference: chr 19
allele count: 60
allele frequency: 3.409090909090909e-2
allele num: 1760
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9595
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 9.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 10116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
  type: Population
  allele count: 2
  allele frequency: 1.0e-1
  allele num: 20
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 2
  allele frequency: 5.263157894736842e-2
  allele num: 38
  num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 1.123595505617977e-2
  allele num: 178
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 12
  allele frequency: 2.105263157894737e-2
  allele num: 570
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
reference allele: CAAA
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD

19-36234609-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234609
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234608
    reference: chr 19
allele count: 15
allele frequency: 1.023611300668759e-3
allele num: 14654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1232delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.583delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1406delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+100delC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+100delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+100delC
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: AG
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-36234610-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234610
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234610
    reference: chr 19
allele count: 59
allele frequency: 2.379032258064516e-2
allele num: 2480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.583C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1406C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1232C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+100C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+100C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+100C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

19-36234611-A-AAATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234611
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234615
    reference: chr 19
allele count: 2
allele frequency: 1.411233418007338e-4
allele num: 14172
alternate allele: AAATT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.581_582insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+98_969+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+98_703+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+98_*222+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+98_*327+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+98_*222+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+98_*429+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+98_1294+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1230_1231insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+98_578+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+98_*222+99insAATT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1404_1405insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+98_461+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+98_471+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+98_*222+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+98_403+99insAATT
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+98_*222+99insAATT
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 28229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

19-36234612-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234612
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234612
    reference: chr 19
allele count: 3
allele frequency: 1.794258373205742e-4
allele num: 16720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.581A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1404A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1230A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+98A>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+98A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+98A>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

19-36234614-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234614
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234614
    reference: chr 19
allele count: 34
allele frequency: 2.981410031567871e-3
allele num: 11404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+96G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1402G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1228G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.579G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+96G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+96G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

19-36234619-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234619
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234619
    reference: chr 19
allele count: 2
allele frequency: 1.069976460517869e-4
allele num: 18692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.574C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1397C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1223C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+91C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+91C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+91C>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

19-36234623-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234623
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234623
    reference: chr 19
allele count: 3
allele frequency: 1.505117399157134e-4
allele num: 19932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1393C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.570C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1219C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+87C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+87C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+87C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-36234624-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234624
    reference: chr 19
allele count: 4
allele frequency: 2.162395934695643e-4
allele num: 18498
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1218A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+86A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1392A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.569A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+86A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+86A>C
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17249
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29693
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

19-36234630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234630
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234630
    reference: chr 19
allele count: 1
allele frequency: 4.631344942571323e-5
allele num: 21592
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.563G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1212G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1386G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+80G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+80G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+80G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26030
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum

19-36234632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234632
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234632
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 22312
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.561C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1210C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1384C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+78C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+78C>T
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-36234634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234634
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234634
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 22772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1208C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1382C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.559C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+76C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+76C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+76C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 23433
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

19-36234639-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234639
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234638
    reference: chr 19
allele count: 3
allele frequency: 1.31521262604121e-4
allele num: 22810
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1202delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1376delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.553delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+70delC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+70delC
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+70delC
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 21325
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25906
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AG
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD

19-36234640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234640
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234640
    reference: chr 19
allele count: 1
allele frequency: 4.164237528108603e-5
allele num: 24014
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.553C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+70C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1376C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1202C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+70C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+70C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-36234652-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234652
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234652
    reference: chr 19
allele count: 3327
allele frequency: 1.101509733810091e-1
allele num: 30204
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1190A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1364A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.541A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+58A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+58A>G
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 2.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 13673
  bin: 2.5e0
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 30610
  bin: 7.5e0
  variant carriers: 1793
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 1.25e1
  variant carriers: 1417
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
num of homozygotes: 130
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

19-36234662-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234662
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234662
    reference: chr 19
allele count: 13
allele frequency: 3.812316715542522e-4
allele num: 34100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+48A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1354A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.531A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1180A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+48A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+48A>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

19-36234665-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234665
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234665
    reference: chr 19
allele count: 1
allele frequency: 2.777469170092212e-5
allele num: 36004
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.528C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1351C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+45C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1177C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+45C>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+45C>A
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ

19-36234667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234667
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234667
    reference: chr 19
allele count: 1
allele frequency: 2.690052187012428e-5
allele num: 37174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+43C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1349C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1175C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.526C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+43C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+43C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

19-36234673-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234673
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234673
    reference: chr 19
allele count: 1
allele frequency: 2.464632523290777e-5
allele num: 40574
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.520C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1169C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1343C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+37C>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+37C>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+37C>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

19-36234673-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234673
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234673
    reference: chr 19
allele count: 1
allele frequency: 2.464632523290777e-5
allele num: 40574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+37C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.520C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1169C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1343C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+37C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+37C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

19-36234678-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234678
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234678
    reference: chr 19
allele count: 1
allele frequency: 2.304359848833994e-5
allele num: 43396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.515A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+32A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1164A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1338A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+32A>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+32A>C
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

19-36234688-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234688
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234688
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 48274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1328A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1154A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+22A>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.505A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+22A>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+22A>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

19-36234699-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234699
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234699
    reference: chr 19
allele count: 2
allele frequency: 3.586157432311278e-5
allele num: 55770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*222+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.403+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*222+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.494A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1143A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1317A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*222+11A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1294+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.461+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.969+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*222+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*222+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.578+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.703+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*327+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*429+11A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.471+11A>G
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30357
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-36234713-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234713
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234713
    reference: chr 19
allele count: 4
allele frequency: 5.786534733674739e-5
allele num: 69126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1129G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.458G>T
  hgvsp: ENSP00000368258.2:p.Arg153Leu
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.700G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.468G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.575G>T
  hgvsp: ENSP00000397645.2:p.Arg192Leu
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*324G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.966G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*219G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*426G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*219G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*219G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*219G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.400G>T
  hgvsp: ENSP00000292879.4:p.Ala134Ser
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1303G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*219G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1291G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.480G>T
  variant of: http://identifiers.org/hgnc/23020
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24624
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala134Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum

19-36234713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234713
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234713
    reference: chr 19
allele count: 2
allele frequency: 2.893267366837369e-5
allele num: 69126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1291G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.468G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.575G>A
  hgvsp: ENSP00000397645.2:p.Arg192His
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.966G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*219G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*219G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1129G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.458G>A
  hgvsp: ENSP00000368258.2:p.Arg153His
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.400G>A
  hgvsp: ENSP00000292879.4:p.Ala134Thr
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*219G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*426G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.480G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*219G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*219G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*324G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.700G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1303G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala134Thr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-36234714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234714
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234714
    reference: chr 19
allele count: 2
allele frequency: 2.805757414213967e-5
allele num: 71282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*218C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*218C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1128C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*218C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.574C>T
  hgvsp: ENSP00000397645.2:p.Arg192Cys
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.457C>T
  hgvsp: ENSP00000368258.2:p.Arg153Cys
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.479C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*323C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.399C>T
  hgvsp: ENST00000292879.5:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*218C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.467C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1290C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*425C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.965C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.699C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1302C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*218C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg153Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-36234725-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234725
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234725
    reference: chr 19
allele count: 9
allele frequency: 1.076761102603369e-4
allele num: 83584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.456G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.468G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.388G>A
  hgvsp: ENSP00000292879.4:p.Gly130Arg
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.688G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.446G>A
  hgvsp: ENSP00000368258.2:p.Arg149Gln
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*207G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*207G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*207G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*414G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*207G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.563G>A
  hgvsp: ENSP00000397645.2:p.Arg188Gln
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1117G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*312G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1279G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1291G>A
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*207G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.954G>A
  variant of: http://identifiers.org/hgnc/23020
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly130Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

19-36234726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234726
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234726
    reference: chr 19
allele count: 3
allele frequency: 3.532154378694045e-5
allele num: 84934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*206C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.467C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*206C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.562C>T
  hgvsp: ENSP00000397645.2:p.Arg188Trp
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1116C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*206C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.953C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*206C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.387C>T
  hgvsp: ENST00000292879.5:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*413C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*311C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.455C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1290C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.445C>T
  hgvsp: ENSP00000368258.2:p.Arg149Trp
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1278C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*206C>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.687C>T
  variant of: http://identifiers.org/hgnc/23020
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg149Trp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/19-36234727-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234727
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234727
    reference: chr 19
allele count: 117
allele frequency: 1.354762511289688e-3
allele num: 86362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1289G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.561G>T
  hgvsp: ENST00000412391.2:c.561G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.444G>T
  hgvsp: ENST00000378975.3:c.444G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*310G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.466G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*205G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.386G>T
  hgvsp: ENSP00000292879.4:p.Gly129Val
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.454G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*205G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*205G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.686G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*205G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1277G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1115G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*205G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*412G>T
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.952G>T
  variant of: http://identifiers.org/hgnc/23020
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24919
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 16934
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
hgvs: p.Gly129Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

19-36234730-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234730
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234730
    reference: chr 19
allele count: 2
allele frequency: 2.241298159894211e-5
allele num: 89234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.463T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.441T>C
  hgvsp: ENST00000378975.3:c.441T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1286T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1112T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*202T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*307T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.949T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.558T>C
  hgvsp: ENST00000412391.2:c.558T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.383T>C
  hgvsp: ENSP00000292879.4:p.Met128Thr
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*202T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*202T>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*202T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.451T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.683T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1274T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*409T>C
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*202T>C
  variant of: http://identifiers.org/hgnc/23020
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met128Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

19-36234731-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 36234731
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 36234731
    reference: chr 19
allele count: 1
allele frequency: 1.112594570538496e-5
allele num: 89880
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000267120
  ensembl protein: ENSP00000472696
  ensembl transcript: ENST00000589807
  gene symbol: AD000671.6
  hgvsc: ENST00000589807.1:c.*201A>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465242
  ensembl transcript: ENST00000591057
  gene symbol: U2AF1L4
  hgvsc: ENST00000591057.1:c.*201A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000471804
  ensembl transcript: ENST00000594792
  gene symbol: U2AF1L4
  hgvsc: ENST00000594792.1:c.*306A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000475046
  ensembl transcript: ENST00000591084
  gene symbol: U2AF1L4
  hgvsc: ENST00000591084.1:c.*201A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000585554
  gene symbol: U2AF1L4
  hgvsc: ENST00000585554.1:n.948A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000474493
  ensembl transcript: ENST00000600296
  gene symbol: U2AF1L4
  hgvsc: ENST00000600296.1:c.*201A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000368258
  ensembl transcript: ENST00000378975
  gene symbol: U2AF1L4
  hgvsc: ENST00000378975.3:c.440A>G
  hgvsp: ENSP00000368258.2:p.Tyr147Cys
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000592913
  gene symbol: U2AF1L4
  hgvsc: ENST00000592913.1:n.682A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000292879
  ensembl transcript: ENST00000292879
  gene symbol: U2AF1L4
  hgvsc: ENST00000292879.5:c.382A>G
  hgvsp: ENSP00000292879.4:p.Met128Val
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000473940
  ensembl transcript: ENST00000589429
  gene symbol: U2AF1L4
  hgvsc: ENST00000589429.1:c.*201A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000397645
  ensembl transcript: ENST00000412391
  gene symbol: U2AF1L4
  hgvsc: ENST00000412391.2:c.557A>G
  hgvsp: ENSP00000397645.2:p.Tyr186Cys
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000591855
  gene symbol: U2AF1L4
  hgvsc: ENST00000591855.1:n.450A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588892
  gene symbol: U2AF1L4
  hgvsc: ENST00000588892.1:n.1285A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000588980
  gene symbol: U2AF1L4
  hgvsc: ENST00000588980.1:n.1273A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161265
  ensembl protein: ENSP00000465170
  ensembl transcript: ENST00000587987
  gene symbol: U2AF1L4
  hgvsc: ENST00000587987.1:c.*408A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000586476
  gene symbol: U2AF1L4
  hgvsc: ENST00000586476.1:n.1111A>G
  variant of: http://identifiers.org/hgnc/23020
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161265
  ensembl transcript: ENST00000590135
  gene symbol: U2AF1L4
  hgvsc: ENST00000590135.1:n.462A>G
  variant of: http://identifiers.org/hgnc/23020
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met128Val
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

GenotypeDepth
all individuals: 491
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 859
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1176
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8451
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 824
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1800
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 320
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 92
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1542
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1880
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

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European (Non-Finnish)
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East Asian
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Latino
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African
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South Asian
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BaseQRankSum
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InbreedingCoeff
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FS
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DP
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QD
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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Latino
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South Asian
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ReadPosRankSum
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QD
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VQSLOD
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MQ
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MQRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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DP
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QD
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MQ
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BaseQRankSum
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GenotypeDepth
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African
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Latino
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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ReadPosRankSum
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FS
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GenotypeQuality
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Latino
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African
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European (Finnish)
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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VQSLOD
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DP
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East Asian
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MQ
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FS
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ReadPosRankSum
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VQSLOD
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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VQSLOD
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ClippingRankSum
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African
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South Asian
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East Asian
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Latino
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MQRankSum
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QD
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BaseQRankSum
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FS
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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DP
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
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MQ
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VQSLOD
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European (Finnish)
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Latino
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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QD
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East Asian
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QD
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FS
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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DP
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African
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East Asian
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MQ
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VQSLOD
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African
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FS
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MQ
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InbreedingCoeff
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East Asian
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European (Finnish)
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African
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FS
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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European (Non-Finnish)
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African
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European (Finnish)
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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QD
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VQSLOD
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MQ
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VQSLOD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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num of homozygotes: 0

African
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European (Non-Finnish)
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allele frequency: NaN
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num of homozygotes: 0

European (Finnish)
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Other
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InbreedingCoeff
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FS
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QD
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DP
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: NaN
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Other
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African
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allele frequency: 0.0e0
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Latino
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FS
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SIO_000300: 0.0e0

MQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 5.0e-1
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Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: NaN
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QD
type: SiteQuality
SIO_000300: 2.904e1

BaseQRankSum
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SIO_000300: 7.27e-1

MQ
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SIO_000300: 5.516e1

MQRankSum
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SIO_000300: 7.27e-1

ReadPosRankSum
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SIO_000300: 7.27e-1

DP
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SIO_000300: 1.1952e4

VQSLOD
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SIO_000300: 1.1e0

FS
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SIO_000300: 5.349e0

InbreedingCoeff
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SIO_000300: 4.37e-2

ClippingRankSum
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SIO_000300: -7.27e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele num: 0
num of homozygotes: 0

South Asian
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Other
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East Asian
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Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 140
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

QD
type: SiteQuality
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DP
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MQ
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SIO_000300: 6.0e1

FS
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InbreedingCoeff
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SIO_000300: -6.68e-2

VQSLOD
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SIO_000300: 3.17e-1

GenotypeDepth
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variant carriers: 963

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 4.237995824634656e-1
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Other
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African
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East Asian
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allele frequency: 2.368421052631579e-1
allele num: 76
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European (Finnish)
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Latino
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allele frequency: 3.787878787878788e-1
allele num: 66
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European (Non-Finnish)
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allele frequency: 3.379888268156425e-1
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BaseQRankSum
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VQSLOD
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DP
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QD
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InbreedingCoeff
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MQ
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FS
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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DP
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InbreedingCoeff
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FS
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MQ
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MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 17
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variant carriers: 5

GenotypeQuality
all individuals: 3659
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 3.333333333333333e-2
allele num: 30
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

South Asian
type: Population
allele count: 26
allele frequency: 1.629072681704261e-2
allele num: 1596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e-1

FS
type: SiteQuality
SIO_000300: 8.7e-1

ClippingRankSum
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SIO_000300: -6.1e-2

MQ
type: SiteQuality
SIO_000300: 5.928e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.032e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
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SIO_000300: -6.65e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 7.0583e4

GenotypeDepth
all individuals: 509
bin: 2.25e1
variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3802
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.064516129032258e-4
allele num: 1240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.222e0

VQSLOD
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SIO_000300: -1.471e0

BaseQRankSum
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SIO_000300: -3.134e0

ReadPosRankSum
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SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -6.610000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.095e1

DP
type: SiteQuality
SIO_000300: 7.6126e4

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.99e-1

GenotypeDepth
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8898
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 1156
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.175983436853002e-4
allele num: 1932
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.995e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.583e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.859999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.03e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.03815e5

GenotypeDepth
all individuals: 2482
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9
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variant carriers: 0

GenotypeDepth
all individuals: 3
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2956
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.41643059490085e-3
allele num: 706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.60327e5

MQ
type: SiteQuality
SIO_000300: 5.333e1

QD
type: SiteQuality
SIO_000300: 1.549e1

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

ReadPosRankSum
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SIO_000300: 1.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.43e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-1

GenotypeDepth
all individuals: 2108
bin: 7.5e0
variant carriers: 66

GenotypeDepth
all individuals: 12236
bin: 2.5e0
variant carriers: 30

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
variant carriers: 21

GenotypeQuality
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bin: 1.75e1
variant carriers: 13

GenotypeQuality
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bin: 2.25e1
variant carriers: 11

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 22

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 7.5e0
variant carriers: 23

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 10

GenotypeQuality
all individuals: 89
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variant carriers: 6

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 6

South Asian
type: Population
allele count: 17
allele frequency: 1.893095768374165e-2
allele num: 898
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 2.631578947368421e-2
allele num: 38
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.703703703703703e-2
allele num: 54
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.578947368421053e-2
allele num: 570
num of homozygotes: 1

African
type: Population
allele count: 1
allele frequency: 5.617977528089887e-3
allele num: 178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.552e0

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

QD
type: SiteQuality
SIO_000300: 3.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.127e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQ
type: SiteQuality
SIO_000300: 4.679e1

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 2.71921e5

GenotypeDepth
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variant carriers: 17

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 64
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variant carriers: 5

GenotypeQuality
all individuals: 219
bin: 1.25e1
variant carriers: 7

GenotypeQuality
all individuals: 89
bin: 9.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 2.808988764044944e-2
allele num: 178
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
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South Asian
type: Population
allele count: 7
allele frequency: 7.79510022271715e-3
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.052631578947368e-2
allele num: 570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.71921e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.127e-1

QD
type: SiteQuality
SIO_000300: 3.44e0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.552e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

MQ
type: SiteQuality
SIO_000300: 4.679e1

GenotypeDepth
all individuals: 385
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 613
bin: 1.75e1
variant carriers: 57

GenotypeDepth
all individuals: 12236
bin: 2.5e0
variant carriers: 6

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 809
bin: 2.25e1
variant carriers: 20

GenotypeDepth
all individuals: 728
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 971
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 223
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 343
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 22
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 9595
bin: 2.5e0
variant carriers: 7

GenotypeQuality
all individuals: 50
bin: 6.75e1
variant carriers: 9

GenotypeQuality
all individuals: 16
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 183
bin: 1.75e1
variant carriers: 8

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 10116
bin: 7.5e0
variant carriers: 10

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 17

GenotypeQuality
all individuals: 14
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 25

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 22

GenotypeQuality
all individuals: 92
bin: 6.25e1
variant carriers: 11

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 22

GenotypeQuality
all individuals: 89
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 19

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 5.555555555555555e-2
allele num: 54
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 86
allele frequency: 9.57683741648107e-2
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 7.303370786516854e-2
allele num: 178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 41
allele frequency: 7.192982456140351e-2
allele num: 570
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 5.263157894736842e-2
allele num: 38
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 2.71921e5

MQ
type: SiteQuality
SIO_000300: 4.679e1

FS
type: SiteQuality
SIO_000300: 2.552e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.127e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

QD
type: SiteQuality
SIO_000300: 3.44e0

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

GenotypeDepth
all individuals: 613
bin: 1.75e1
variant carriers: 45

GenotypeDepth
all individuals: 2108
bin: 7.5e0
variant carriers: 5

GenotypeDepth
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 385
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 726
bin: 1.25e1
variant carriers: 17

GenotypeDepth
all individuals: 12
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1172
bin: 3.25e1
variant carriers: 11

GenotypeDepth
all individuals: 32
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 728
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 16
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 9595
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 9

GenotypeQuality
all individuals: 219
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 183
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 50
bin: 6.75e1
variant carriers: 9

GenotypeQuality
all individuals: 89
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 10116
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 343
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 25
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 22
bin: 7.75e1
variant carriers: 10

GenotypeQuality
all individuals: 14
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.964912280701754e-2
allele num: 570
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 3.932584269662921e-2
allele num: 178
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 1.31578947368421e-1
allele num: 38
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 66
allele frequency: 7.349665924276169e-2
allele num: 898
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 1.0e-1
allele num: 20
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

MQ
type: SiteQuality
SIO_000300: 4.679e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.127e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.71921e5

FS
type: SiteQuality
SIO_000300: 2.552e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

QD
type: SiteQuality
SIO_000300: 3.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

GenotypeDepth
all individuals: 726
bin: 1.25e1
variant carriers: 10

GenotypeDepth
all individuals: 613
bin: 1.75e1
variant carriers: 6

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 971
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 809
bin: 2.25e1
variant carriers: 3

GenotypeDepth
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1172
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10116
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 219
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 25
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 50
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 9595
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 92
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 343
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 183
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 22
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 89
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 2

East Asian
type: Population
allele count: 1
allele frequency: 2.631578947368421e-2
allele num: 38
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.703703703703703e-2
allele num: 54
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.228070175438596e-2
allele num: 570
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.685393258426966e-2
allele num: 178
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 5.567928730512249e-3
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.44e0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

FS
type: SiteQuality
SIO_000300: 2.552e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.127e-1

MQ
type: SiteQuality
SIO_000300: 4.679e1

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.71921e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

Latino
type: Population
allele count: 1
allele frequency: 1.851851851851852e-2
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 41
allele frequency: 4.565701559020045e-2
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 4.679e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.127e-1

DP
type: SiteQuality
SIO_000300: 2.71921e5

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

FS
type: SiteQuality
SIO_000300: 2.552e0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

QD
type: SiteQuality
SIO_000300: 3.44e0

GenotypeDepth
all individuals: 145
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 998
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 586
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1115
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 982
bin: 4.25e1
variant carriers: 3

GenotypeDepth
all individuals: 512
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 24523
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 73
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3640
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2815
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 206
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2973
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 308
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24910
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 74
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.820721769499418e-4
allele num: 5154
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 8.488964346349745e-4
allele num: 1178
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 1.370614035087719e-3
allele num: 7296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 6.578947368421052e-3
allele num: 152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.353e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.091e0

QD
type: SiteQuality
SIO_000300: 6.2e-1

FS
type: SiteQuality
SIO_000300: 1.1131e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.66e-2

MQ
type: SiteQuality
SIO_000300: 5.41e1

DP
type: SiteQuality
SIO_000300: 3.88928e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.944e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.72e-1

GenotypeDepth
all individuals: 1241
bin: 2.75e1
variant carriers: 7

GenotypeDepth
all individuals: 1175
bin: 1.25e1
variant carriers: 3

GenotypeDepth
all individuals: 766
bin: 1.75e1
variant carriers: 3

GenotypeDepth
all individuals: 479
bin: 4.75e1
variant carriers: 8

GenotypeDepth
all individuals: 25380
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1233
bin: 3.25e1
variant carriers: 17

GenotypeDepth
all individuals: 262
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 788
bin: 4.25e1
variant carriers: 7

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 224
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 359
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 41
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 14050
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 21315
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1162
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 314
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 4
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 28

South Asian
type: Population
allele count: 39
allele frequency: 4.431818181818182e-2
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.272727272727273e-2
allele num: 88
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 8.474576271186441e-3
allele num: 354
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.351351351351351e-2
allele num: 74
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 1.340996168582376e-2
allele num: 1044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.602e-1

FS
type: SiteQuality
SIO_000300: 2.0288e1

QD
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: 4.62e0

DP
type: SiteQuality
SIO_000300: 3.5047e5

MQRankSum
type: SiteQuality
SIO_000300: -1.737e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.098e0

MQ
type: SiteQuality
SIO_000300: 5.602e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.737e0

GenotypeDepth
all individuals: 27
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 225
bin: 5.25e1
variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 2.780094523213789e-4
allele num: 7194
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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VQSLOD
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QD
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.58e-2

DP
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SIO_000300: 3.51182e5

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 3.887017362010883e-4
allele num: 7718
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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BaseQRankSum
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SIO_000300: -2.662e0

DP
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QD
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MQRankSum
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SIO_000300: -2.576e0

ReadPosRankSum
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SIO_000300: -7.05e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 3.496503496503497e-3
allele num: 286
num of homozygotes: 0

African
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allele count: 1
allele frequency: 8.833922261484099e-4
allele num: 1132
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.624129930394432e-3
allele num: 4310
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 24
allele frequency: 4.574914220358368e-3
allele num: 5246
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 4.065040650406504e-3
allele num: 246
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.439e0

ClippingRankSum
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VQSLOD
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ReadPosRankSum
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SIO_000300: 6.929999999999999e-1

QD
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DP
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SIO_000300: 4.15245e5

MQRankSum
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SIO_000300: -1.068e0

BaseQRankSum
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SIO_000300: -2.327e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.077e-1

MQ
type: SiteQuality
SIO_000300: 5.787e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 7928
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 4.385964912280702e-3
allele num: 456
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 356
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7042
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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ClippingRankSum
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DP
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 2.645502645502645e-3
allele num: 378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.291989664082687e-4
allele num: 7740
num of homozygotes: 0

East Asian
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allele frequency: 2.05761316872428e-3
allele num: 486
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1930
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South Asian
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allele count: 0
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BaseQRankSum
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ReadPosRankSum
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FS
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MQ
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ClippingRankSum
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DP
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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allele frequency: 5.395198273536552e-4
allele num: 7414
num of homozygotes: 0

Other
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DP
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QD
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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MQ
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BaseQRankSum
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VQSLOD
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DP
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FS
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QD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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num of homozygotes: 0

South Asian
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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QD
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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European (Finnish)
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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DP
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FS
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VQSLOD
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QD
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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East Asian
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South Asian
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InbreedingCoeff
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FS
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QD
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DP
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VQSLOD
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MQ
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 32

GenotypeDepth
all individuals: 837
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variant carriers: 386

GenotypeDepth
all individuals: 119
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variant carriers: 35

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 54

GenotypeQuality
all individuals: 164
bin: 5.75e1
variant carriers: 140

GenotypeQuality
all individuals: 439
bin: 3.75e1
variant carriers: 33

GenotypeQuality
all individuals: 27017
bin: 2.25e1
variant carriers: 128

GenotypeQuality
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bin: 5.25e1
variant carriers: 122

GenotypeQuality
all individuals: 1010
bin: 1.75e1
variant carriers: 109

GenotypeQuality
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variant carriers: 37

GenotypeQuality
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GenotypeQuality
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variant carriers: 44

GenotypeQuality
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variant carriers: 90

GenotypeQuality
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variant carriers: 236

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 46

GenotypeQuality
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variant carriers: 219

GenotypeQuality
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variant carriers: 92

GenotypeQuality
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GenotypeQuality
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variant carriers: 153

GenotypeQuality
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variant carriers: 3381

GenotypeQuality
all individuals: 5461
bin: 6.25e1
variant carriers: 69

GenotypeQuality
all individuals: 1461
bin: 6.75e1
variant carriers: 49

Latino
type: Population
allele count: 82
allele frequency: 9.785202863961814e-2
allele num: 838
num of homozygotes: 0

African
type: Population
allele count: 247
allele frequency: 7.911595131326073e-2
allele num: 3122
num of homozygotes: 6

East Asian
type: Population
allele count: 67
allele frequency: 6.014362657091562e-2
allele num: 1114
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 1837
allele frequency: 1.303946621237933e-1
allele num: 14088
num of homozygotes: 73

European (Finnish)
type: Population
allele count: 127
allele frequency: 6.553147574819401e-2
allele num: 1938
num of homozygotes: 3

South Asian
type: Population
allele count: 928
allele frequency: 1.054305839581913e-1
allele num: 8802
num of homozygotes: 45

Other
type: Population
allele count: 39
allele frequency: 1.291390728476821e-1
allele num: 302
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.79069e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e-1

QD
type: SiteQuality
SIO_000300: 1.571e1

GenotypeDepth
all individuals: 33660
bin: 7.5e0
variant carriers: 5

GenotypeDepth
all individuals: 265
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5195
bin: 1.25e1
variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 22
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variant carriers: 0

GenotypeDepth
all individuals: 9329
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GenotypeDepth
all individuals: 120
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variant carriers: 0

GenotypeDepth
all individuals: 14
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variant carriers: 0

GenotypeDepth
all individuals: 8
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variant carriers: 1

GenotypeDepth
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variant carriers: 8

GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 2078
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variant carriers: 0

GenotypeQuality
all individuals: 1555
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 169
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variant carriers: 0

GenotypeQuality
all individuals: 569
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 1.322168356104011e-3
allele num: 9076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.01e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

QD
type: SiteQuality
SIO_000300: 1.283e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

DP
type: SiteQuality
SIO_000300: 6.47423e5

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

FS
type: SiteQuality
SIO_000300: 1.899e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

GenotypeDepth
all individuals: 4911
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4005
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variant carriers: 0

GenotypeDepth
all individuals: 1771
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variant carriers: 0

GenotypeDepth
all individuals: 30
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variant carriers: 0

GenotypeDepth
all individuals: 33900
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GenotypeDepth
all individuals: 944
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variant carriers: 1

GenotypeDepth
all individuals: 8139
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GenotypeDepth
all individuals: 22
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GenotypeDepth
all individuals: 10
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GenotypeDepth
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GenotypeDepth
all individuals: 72
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variant carriers: 0

GenotypeDepth
all individuals: 20
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variant carriers: 0

GenotypeDepth
all individuals: 5
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GenotypeDepth
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 1181
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 541
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variant carriers: 1

GenotypeQuality
all individuals: 296
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variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.703205201323143e-5
allele num: 17534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.63361e5

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.44e-1

FS
type: SiteQuality
SIO_000300: 3.522e0

QD
type: SiteQuality
SIO_000300: 1.288e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 992
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
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variant carriers: 0

GenotypeDepth
all individuals: 7
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variant carriers: 0

GenotypeDepth
all individuals: 1765
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GenotypeDepth
all individuals: 22
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variant carriers: 0

GenotypeDepth
all individuals: 30
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GenotypeDepth
all individuals: 17
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GenotypeDepth
all individuals: 530
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GenotypeDepth
all individuals: 71
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GenotypeDepth
all individuals: 4045
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GenotypeDepth
all individuals: 258
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GenotypeDepth
all individuals: 5
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GenotypeDepth
all individuals: 20
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GenotypeDepth
all individuals: 119
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GenotypeQuality
all individuals: 124
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GenotypeQuality
all individuals: 7718
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1734
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variant carriers: 0

GenotypeQuality
all individuals: 1259
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 242
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 589
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variant carriers: 0

GenotypeQuality
all individuals: 348
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variant carriers: 0

GenotypeQuality
all individuals: 986
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variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18230
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.074344649763644e-4
allele num: 9308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2374
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.323e0

MQ
type: SiteQuality
SIO_000300: 5.871e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.95e-1

FS
type: SiteQuality
SIO_000300: 8.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

MQRankSum
type: SiteQuality
SIO_000300: 6.18e-1

DP
type: SiteQuality
SIO_000300: 6.72559e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.63e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.06e-1

QD
type: SiteQuality
SIO_000300: 9.82e0

GenotypeDepth
all individuals: 22
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variant carriers: 0

GenotypeDepth
all individuals: 1772
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variant carriers: 0

GenotypeDepth
all individuals: 30
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 1049
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GenotypeQuality
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GenotypeQuality
all individuals: 1283
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variant carriers: 0

GenotypeQuality
all individuals: 316
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GenotypeQuality
all individuals: 303
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GenotypeQuality
all individuals: 555
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GenotypeQuality
all individuals: 5592
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GenotypeQuality
all individuals: 171
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GenotypeQuality
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GenotypeQuality
all individuals: 544
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2357
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variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2522
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.041883725776203e-4
allele num: 9598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1948
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

FS
type: SiteQuality
SIO_000300: 3.188e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.062e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

DP
type: SiteQuality
SIO_000300: 7.03997e5

GenotypeDepth
all individuals: 258
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variant carriers: 0

GenotypeDepth
all individuals: 7
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variant carriers: 0

GenotypeDepth
all individuals: 5
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 741
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8583
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
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GenotypeQuality
all individuals: 167
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.933885928557332e-5
allele num: 20268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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MQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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QD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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VQSLOD
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DP
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Other
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South Asian
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African
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Latino
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ClippingRankSum
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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East Asian
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Other
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South Asian
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DP
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FS
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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DP
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MQRankSum
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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FS
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QD
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MQ
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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East Asian
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allele frequency: 2.142245072836333e-4
allele num: 4668
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.590942066535392e-5
allele num: 38596
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: -9.1e-1

BaseQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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SIO_000300: 9.46918e5

ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6972
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 7.111251580278129e-4
allele num: 12656
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45730
num of homozygotes: 0

QD
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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SIO_000300: 0.0e0

FS
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SIO_000300: 2.648e0

DP
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SIO_000300: 1.059903e6

MQ
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SIO_000300: 5.728e1

InbreedingCoeff
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SIO_000300: -3.0e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7602
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.150630134629447e-5
allele num: 46498
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.568135486906069e-4
allele num: 12754
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4372
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7138
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

VQSLOD
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DP
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FS
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InbreedingCoeff
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SIO_000300: -3.0e-3

BaseQRankSum
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SIO_000300: 3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

ReadPosRankSum
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SIO_000300: -4.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.109e1

GenotypeDepth
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variant carriers: 8

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.090909090909091e-4
allele num: 7700
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 75
allele frequency: 1.585489599188229e-3
allele num: 47304
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 2
allele frequency: 1.555935895441108e-4
allele num: 12854
num of homozygotes: 0

Latino
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allele count: 29
allele frequency: 3.937007874015748e-3
allele num: 7366
num of homozygotes: 0

Other
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allele count: 4
allele frequency: 5.865102639296188e-3
allele num: 682
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FS
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.588814744200826e-4
allele num: 6294
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.042900919305414e-5
allele num: 48950
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Latino
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European (Finnish)
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Other
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South Asian
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ReadPosRankSum
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QD
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MQRankSum
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VQSLOD
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FS
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Latino
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Other
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.026588845654993e-5
allele num: 49344
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East Asian
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.338e1

MQ
type: SiteQuality
SIO_000300: 5.682e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.239e0