17-46132389-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46132389
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46132389
    reference: chr 17
allele count: 7
allele frequency: 9.348290598290599e-4
allele num: 7488
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.36+266C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-1359C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-352+608C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-1359C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.36+266C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.9C>T
  hgvsp: ENST00000580050.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-1392C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.9C>T
  hgvsp: ENST00000536222.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.9C>T
  hgvsp: ENST00000577431.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.9C>T
  hgvsp: ENST00000579537.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-352+524C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-1359C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-442+389C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg3Arg
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-46132419-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46132419
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46132419
    reference: chr 17
allele count: 1
allele frequency: 1.568873548791967e-4
allele num: 6374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-442+419C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-1329C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.39C>A
  hgvsp: ENST00000577431.1:c.39C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.39C>A
  hgvsp: ENST00000579537.1:c.39C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.36+296C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-352+554C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-1329C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-1362C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-352+638C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.39C>A
  hgvsp: ENST00000580050.1:c.39C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.39C>A
  hgvsp: ENST00000536222.1:c.39C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-1329C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.36+296C>A
  variant of: http://identifiers.org/hgnc/7781
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly13Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-46132424-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46132424
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46132424
    reference: chr 17
allele count: 1079
allele frequency: 1.792954469923563e-1
allele num: 6018
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-1324C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-1357C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-1324C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.44C>G
  hgvsp: ENSP00000462444.1:p.Ala15Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-442+424C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-352+643C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.44C>G
  hgvsp: ENSP00000464203.1:p.Ala15Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.36+301C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-1324C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.44C>G
  hgvsp: ENSP00000445811.1:p.Ala15Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-352+559C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.44C>G
  hgvsp: ENSP00000463836.1:p.Ala15Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.36+301C>G
  variant of: http://identifiers.org/hgnc/7781
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 346
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 2.25e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 2.5e0
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 328
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala15Gly
num of homozygotes: 73
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-46132434-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46132434
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46132434
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 4302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-1314C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.54C>T
  hgvsp: ENST00000580050.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.54C>T
  hgvsp: ENST00000536222.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.36+311C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.54C>T
  hgvsp: ENST00000577431.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-352+569C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-442+434C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.36+311C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-1314C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-1314C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.54C>T
  hgvsp: ENST00000579537.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-352+653C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-1347C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser18Ser
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

17-46132455-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46132455
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46132455
    reference: chr 17
allele count: 3
allele frequency: 1.169134840218239e-3
allele num: 2566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.75G>A
  hgvsp: ENST00000579537.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.75G>A
  hgvsp: ENST00000580050.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-352+590G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.36+332G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-1326G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.36+332G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-1293G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-1293G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.75G>A
  hgvsp: ENST00000577431.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.75G>A
  hgvsp: ENST00000536222.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-352+674G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-1293G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-442+455G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu25Leu
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

17-46132479-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46132479
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46132479
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-352+614C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-442+479C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.36+356C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-352+698C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.36+356C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.99C>T
  hgvsp: ENST00000577431.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.99C>T
  hgvsp: ENST00000580050.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-1269C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.99C>T
  hgvsp: ENST00000579537.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-1269C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-1302C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-1269C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.99C>T
  hgvsp: ENST00000536222.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro33Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

17-46132517-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46132517
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46132517
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 96
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-1231G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-442+517G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.36+394G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-1231G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-1264G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.132+5G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-1231G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.132+5G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.132+5G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.132+5G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-352+736G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-352+652G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.36+394G>T
  variant of: http://identifiers.org/hgnc/7781
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6502
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.132+5G>T
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

17-46132532-C-CTAAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46132532
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46132537
    reference: chr 17
allele count: 1
allele frequency: 2.777777777777778e-2
allele num: 36
alternate allele: CTAAAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-352+754_-352+758dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.36+412_36+416dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-442+535_-442+539dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.132+23_132+27dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-1213_511-1209dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-1246_511-1242dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.36+412_36+416dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.132+23_132+27dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.132+23_132+27dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-1213_511-1209dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-1213_511-1209dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.132+23_132+27dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-352+670_-352+674dupAAGTA
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 2.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

17-46133698-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133698
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133698
    reference: chr 17
allele count: 1
allele frequency: 8.291598951941893e-6
allele num: 120604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-83G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.133-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-351-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-441-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-83G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-83G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.37-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.133-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-351-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.133-50G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-351-50G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

17-46133705-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133705
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133705
    reference: chr 17
allele count: 7
allele frequency: 5.801810164771409e-5
allele num: 120652
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.37-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.133-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-351-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.133-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-76A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-76A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-351-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-441-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.133-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-351-43A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-76A>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15181
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

17-46133714-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133714
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133713
    reference: chr 17
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.37-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.133-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-441-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-351-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-66delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-66delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-351-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-66delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.133-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-351-33delC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.133-33delC
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: TC
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-46133723-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133723
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133723
    reference: chr 17
allele count: 1
allele frequency: 8.276364358664525e-6
allele num: 120826
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-58T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-441-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.133-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-58T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-351-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.133-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-351-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-351-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.37-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.133-25T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-58T>C
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-46133734-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133734
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133734
    reference: chr 17
allele count: 2
allele frequency: 1.653849334325643e-5
allele num: 120930
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.133-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.37-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-47G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-351-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.133-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-47G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-441-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-351-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-351-14G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-47G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.133-14G>C
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS

17-46133744-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133744
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133744
    reference: chr 17
allele count: 1
allele frequency: 8.263370132874991e-6
allele num: 121016
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.511-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-37T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.511-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.133-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-351-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-37T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-441-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-351-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.133-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-351-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.511-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.37-4T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-37T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.133-4T>C
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.511-4T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

17-46133756-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133756
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133756
    reference: chr 17
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.141T>G
  hgvsp: ENSP00000445811.1:p.Asp47Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.519T>G
  hgvsp: ENSP00000461960.1:p.Asp173Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.141T>G
  hgvsp: ENSP00000462444.1:p.Asp47Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-25T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-343T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.45T>G
  hgvsp: ENSP00000464446.1:p.Asp15Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-25T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-343T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.519T>G
  hgvsp: ENSP00000350072.5:p.Asp173Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.141T>G
  hgvsp: ENSP00000464203.1:p.Asp47Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-433T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.519T>G
  hgvsp: ENSP00000354855.3:p.Asp173Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-343T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-25T>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp173Glu
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

17-46133766-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133766
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133766
    reference: chr 17
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.529A>G
  hgvsp: ENSP00000350072.5:p.Ile177Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.151A>G
  hgvsp: ENSP00000445811.1:p.Ile51Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-333A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-423A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-333A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.151A>G
  hgvsp: ENSP00000464203.1:p.Ile51Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.151A>G
  hgvsp: ENSP00000462444.1:p.Ile51Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-15A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.529A>G
  hgvsp: ENSP00000461960.1:p.Ile177Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-333A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.529A>G
  hgvsp: ENSP00000354855.3:p.Ile177Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-15A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.55A>G
  hgvsp: ENSP00000464446.1:p.Ile19Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-15A>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27070
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile177Val
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

17-46133776-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133776
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133776
    reference: chr 17
allele count: 6
allele frequency: 4.947392724034434e-5
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-323G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.161G>A
  hgvsp: ENSP00000464203.1:p.Arg54Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.161G>A
  hgvsp: ENSP00000445811.1:p.Arg54Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.65G>A
  hgvsp: ENSP00000464446.1:p.Arg22Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-5G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.539G>A
  hgvsp: ENSP00000350072.5:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.161G>A
  hgvsp: ENSP00000462444.1:p.Arg54Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-5G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-5G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.539G>A
  hgvsp: ENSP00000354855.3:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.539G>A
  hgvsp: ENSP00000461960.1:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-413G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-323G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-323G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg180Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

17-46133777-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133777
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133777
    reference: chr 17
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.511-4A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.162A>G
  hgvsp: ENST00000536222.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.540A>G
  hgvsp: ENST00000362042.3:c.540A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.540A>G
  hgvsp: ENST00000585291.1:c.540A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.162A>G
  hgvsp: ENST00000579537.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.66A>G
  hgvsp: ENST00000582155.1:c.66A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.37-4A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.540A>G
  hgvsp: ENST00000357480.5:c.540A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.133-4A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.162A>G
  hgvsp: ENST00000580050.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-412A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-322A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-322A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-322A>G
  variant of: http://identifiers.org/hgnc/7781
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.37-4A>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

17-46133792-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133792
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133792
    reference: chr 17
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.177G>C
  hgvsp: ENST00000536222.1:c.177G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.144G>C
  hgvsp: ENST00000577431.1:c.144G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.177G>C
  hgvsp: ENST00000579537.1:c.177G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-307G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.522G>C
  hgvsp: ENST00000361665.3:c.522G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.555G>C
  hgvsp: ENST00000585291.1:c.555G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-397G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.81G>C
  hgvsp: ENST00000582155.1:c.81G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.555G>C
  hgvsp: ENST00000362042.3:c.555G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-307G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.48G>C
  hgvsp: ENST00000583378.1:c.48G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.177G>C
  hgvsp: ENST00000580050.1:c.177G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.555G>C
  hgvsp: ENST00000357480.5:c.555G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-307G>C
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu185Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

17-46133800-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133800
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133800
    reference: chr 17
allele count: 3
allele frequency: 2.472636159831201e-5
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.89G>A
  hgvsp: ENSP00000464446.1:p.Gly30Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-299G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.185G>A
  hgvsp: ENSP00000464203.1:p.Gly62Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.56G>A
  hgvsp: ENSP00000463291.1:p.Gly19Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.185G>A
  hgvsp: ENSP00000462444.1:p.Gly62Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.152G>A
  hgvsp: ENSP00000463836.1:p.Gly51Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.530G>A
  hgvsp: ENSP00000355190.3:p.Gly177Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.185G>A
  hgvsp: ENSP00000445811.1:p.Gly62Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-299G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-389G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.563G>A
  hgvsp: ENSP00000350072.5:p.Gly188Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-299G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.563G>A
  hgvsp: ENSP00000354855.3:p.Gly188Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.563G>A
  hgvsp: ENSP00000461960.1:p.Gly188Glu
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly188Glu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

17-46133801-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133801
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133801
    reference: chr 17
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.564G>T
  hgvsp: ENST00000362042.3:c.564G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.531G>T
  hgvsp: ENST00000361665.3:c.531G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.90G>T
  hgvsp: ENST00000582155.1:c.90G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.186G>T
  hgvsp: ENST00000580050.1:c.186G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-298G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.564G>T
  hgvsp: ENST00000585291.1:c.564G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-298G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.186G>T
  hgvsp: ENST00000536222.1:c.186G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.153G>T
  hgvsp: ENST00000577431.1:c.153G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.57G>T
  hgvsp: ENST00000583378.1:c.57G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-298G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.186G>T
  hgvsp: ENST00000579537.1:c.186G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-388G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.564G>T
  hgvsp: ENST00000357480.5:c.564G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly188Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-46133802-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133802
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133802
    reference: chr 17
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.187C>T
  hgvsp: ENSP00000462444.1:p.Arg63Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.58C>T
  hgvsp: ENSP00000463291.1:p.Arg20Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.565C>T
  hgvsp: ENSP00000461960.1:p.Arg189Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.91C>T
  hgvsp: ENSP00000464446.1:p.Arg31Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-297C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.187C>T
  hgvsp: ENSP00000445811.1:p.Arg63Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.154C>T
  hgvsp: ENSP00000463836.1:p.Arg52Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.187C>T
  hgvsp: ENSP00000464203.1:p.Arg63Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.532C>T
  hgvsp: ENSP00000355190.3:p.Arg178Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-297C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-297C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.565C>T
  hgvsp: ENSP00000350072.5:p.Arg189Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.565C>T
  hgvsp: ENSP00000354855.3:p.Arg189Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-387C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg189Cys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-46133803-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133803
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133803
    reference: chr 17
allele count: 2
allele frequency: 1.648315421639085e-5
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.92G>A
  hgvsp: ENSP00000464446.1:p.Arg31His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.155G>A
  hgvsp: ENSP00000463836.1:p.Arg52His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.188G>A
  hgvsp: ENSP00000445811.1:p.Arg63His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.59G>A
  hgvsp: ENSP00000463291.1:p.Arg20His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.566G>A
  hgvsp: ENSP00000350072.5:p.Arg189His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-296G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.188G>A
  hgvsp: ENSP00000464203.1:p.Arg63His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.533G>A
  hgvsp: ENSP00000355190.3:p.Arg178His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.566G>A
  hgvsp: ENSP00000354855.3:p.Arg189His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.188G>A
  hgvsp: ENSP00000462444.1:p.Arg63His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-296G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-386G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-296G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.566G>A
  hgvsp: ENSP00000461960.1:p.Arg189His
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg189His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

17-46133803-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133803
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133803
    reference: chr 17
allele count: 2
allele frequency: 1.648315421639085e-5
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.566G>T
  hgvsp: ENSP00000350072.5:p.Arg189Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.188G>T
  hgvsp: ENSP00000445811.1:p.Arg63Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.533G>T
  hgvsp: ENSP00000355190.3:p.Arg178Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-296G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.155G>T
  hgvsp: ENSP00000463836.1:p.Arg52Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.566G>T
  hgvsp: ENSP00000354855.3:p.Arg189Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462444
  ensembl transcript: ENST00000579537
  gene symbol: NFE2L1
  hgvsc: ENST00000579537.1:c.188G>T
  hgvsp: ENSP00000462444.1:p.Arg63Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-296G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.188G>T
  hgvsp: ENSP00000464203.1:p.Arg63Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.59G>T
  hgvsp: ENSP00000463291.1:p.Arg20Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-386G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-296G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.566G>T
  hgvsp: ENSP00000461960.1:p.Arg189Leu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.92G>T
  hgvsp: ENSP00000464446.1:p.Arg31Leu
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg189Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-46133807-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133807
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133807
    reference: chr 17
allele count: 2
allele frequency: 1.648179585647652e-5
allele num: 121346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.96G>A
  hgvsp: ENST00000582155.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.63G>A
  hgvsp: ENST00000583378.1:c.63G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.159G>A
  hgvsp: ENST00000577431.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-382G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.192G>A
  hgvsp: ENST00000536222.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.537G>A
  hgvsp: ENST00000361665.3:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.192G>A
  hgvsp: ENST00000580050.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.570G>A
  hgvsp: ENST00000357480.5:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-292G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-292G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.570G>A
  hgvsp: ENST00000585291.1:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.570G>A
  hgvsp: ENST00000362042.3:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-292G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu190Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

17-46133815-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133815
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133815
    reference: chr 17
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.104A>G
  hgvsp: ENSP00000464446.1:p.Asp35Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.200A>G
  hgvsp: ENSP00000464203.1:p.Asp67Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.578A>G
  hgvsp: ENSP00000354855.3:p.Asp193Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.167A>G
  hgvsp: ENSP00000463836.1:p.Asp56Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.200A>G
  hgvsp: ENSP00000445811.1:p.Asp67Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.71A>G
  hgvsp: ENSP00000463291.1:p.Asp24Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-284A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.545A>G
  hgvsp: ENSP00000355190.3:p.Asp182Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.578A>G
  hgvsp: ENSP00000461960.1:p.Asp193Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-284A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-374A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.578A>G
  hgvsp: ENSP00000350072.5:p.Asp193Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-284A>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15308
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp193Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

17-46133818-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133818
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133818
    reference: chr 17
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-281A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.170A>G
  hgvsp: ENSP00000463836.1:p.Tyr57Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.581A>G
  hgvsp: ENSP00000350072.5:p.Tyr194Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.74A>G
  hgvsp: ENSP00000463291.1:p.Tyr25Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.203A>G
  hgvsp: ENSP00000445811.1:p.Tyr68Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-281A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.107A>G
  hgvsp: ENSP00000464446.1:p.Tyr36Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.548A>G
  hgvsp: ENSP00000355190.3:p.Tyr183Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-281A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-371A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.581A>G
  hgvsp: ENSP00000354855.3:p.Tyr194Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.581A>G
  hgvsp: ENSP00000461960.1:p.Tyr194Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.203A>G
  hgvsp: ENSP00000464203.1:p.Tyr68Cys
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr194Cys
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-46133819-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133819
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133819
    reference: chr 17
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.171T>C
  hgvsp: ENST00000577431.1:c.171T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.582T>C
  hgvsp: ENST00000357480.5:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-370T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.582T>C
  hgvsp: ENST00000585291.1:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.582T>C
  hgvsp: ENST00000362042.3:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.549T>C
  hgvsp: ENST00000361665.3:c.549T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.108T>C
  hgvsp: ENST00000582155.1:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.204T>C
  hgvsp: ENST00000536222.1:c.204T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-280T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-280T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.204T>C
  hgvsp: ENST00000580050.1:c.204T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.75T>C
  hgvsp: ENST00000583378.1:c.75T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-280T>C
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr194Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

17-46133823-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133823
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133823
    reference: chr 17
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-276C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.208C>T
  hgvsp: ENSP00000464203.1:p.His70Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.586C>T
  hgvsp: ENSP00000354855.3:p.His196Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.79C>T
  hgvsp: ENSP00000463291.1:p.His27Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-276C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.175C>T
  hgvsp: ENSP00000463836.1:p.His59Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.586C>T
  hgvsp: ENSP00000350072.5:p.His196Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.208C>T
  hgvsp: ENSP00000445811.1:p.His70Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.553C>T
  hgvsp: ENSP00000355190.3:p.His185Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.586C>T
  hgvsp: ENSP00000461960.1:p.His196Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-366C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.112C>T
  hgvsp: ENSP00000464446.1:p.His38Tyr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-276C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15305
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His196Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

17-46133826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133826
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133826
    reference: chr 17
allele count: 3
allele frequency: 2.471984179301253e-5
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.556C>T
  hgvsp: ENSP00000355190.3:p.Arg186Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.589C>T
  hgvsp: ENSP00000461960.1:p.Arg197Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-273C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.211C>T
  hgvsp: ENSP00000464203.1:p.Arg71Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.178C>T
  hgvsp: ENSP00000463836.1:p.Arg60Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.211C>T
  hgvsp: ENSP00000445811.1:p.Arg71Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.589C>T
  hgvsp: ENSP00000354855.3:p.Arg197Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.115C>T
  hgvsp: ENSP00000464446.1:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-363C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.82C>T
  hgvsp: ENSP00000463291.1:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-273C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-273C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.589C>T
  hgvsp: ENSP00000350072.5:p.Arg197Cys
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg197Cys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

17-46133827-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133827
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133827
    reference: chr 17
allele count: 4
allele frequency: 3.296033224014898e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.590G>A
  hgvsp: ENSP00000354855.3:p.Arg197His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.590G>A
  hgvsp: ENSP00000350072.5:p.Arg197His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.83G>A
  hgvsp: ENSP00000463291.1:p.Arg28His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-272G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.590G>A
  hgvsp: ENSP00000461960.1:p.Arg197His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.557G>A
  hgvsp: ENSP00000355190.3:p.Arg186His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.212G>A
  hgvsp: ENSP00000445811.1:p.Arg71His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.116G>A
  hgvsp: ENSP00000464446.1:p.Arg39His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-272G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.212G>A
  hgvsp: ENSP00000464203.1:p.Arg71His
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-362G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-272G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.179G>A
  hgvsp: ENSP00000463836.1:p.Arg60His
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27154
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg197His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

17-46133833-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133833
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133833
    reference: chr 17
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.596A>G
  hgvsp: ENSP00000461960.1:p.Lys199Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.185A>G
  hgvsp: ENSP00000463836.1:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.596A>G
  hgvsp: ENSP00000354855.3:p.Lys199Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-266A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.596A>G
  hgvsp: ENSP00000350072.5:p.Lys199Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.563A>G
  hgvsp: ENSP00000355190.3:p.Lys188Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-266A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.89A>G
  hgvsp: ENSP00000463291.1:p.Lys30Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-356A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.218A>G
  hgvsp: ENSP00000464203.1:p.Lys73Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-266A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.122A>G
  hgvsp: ENSP00000464446.1:p.Lys41Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.218A>G
  hgvsp: ENSP00000445811.1:p.Lys73Arg
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys199Arg
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS

17-46133853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133853
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133853
    reference: chr 17
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.142G>A
  hgvsp: ENSP00000464446.1:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-246G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.205G>A
  hgvsp: ENSP00000463836.1:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.238G>A
  hgvsp: ENSP00000445811.1:p.Glu80Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.109G>A
  hgvsp: ENSP00000463291.1:p.Glu37Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.616G>A
  hgvsp: ENSP00000350072.5:p.Glu206Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.583G>A
  hgvsp: ENSP00000355190.3:p.Glu195Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.238G>A
  hgvsp: ENSP00000464203.1:p.Glu80Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.616G>A
  hgvsp: ENSP00000461960.1:p.Glu206Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.616G>A
  hgvsp: ENSP00000354855.3:p.Glu206Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-246G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-246G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-336G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu206Lys
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

17-46133860-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133860
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133860
    reference: chr 17
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.149G>A
  hgvsp: ENSP00000464446.1:p.Arg50Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-329G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.590G>A
  hgvsp: ENSP00000355190.3:p.Arg197Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.245G>A
  hgvsp: ENSP00000445811.1:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.212G>A
  hgvsp: ENSP00000463836.1:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.623G>A
  hgvsp: ENSP00000461960.1:p.Arg208Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.245G>A
  hgvsp: ENSP00000464203.1:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.623G>A
  hgvsp: ENSP00000354855.3:p.Arg208Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-239G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-239G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.116G>A
  hgvsp: ENSP00000463291.1:p.Arg39Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.623G>A
  hgvsp: ENSP00000350072.5:p.Arg208Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-239G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15309
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg208Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

17-46133864-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133864
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133864
    reference: chr 17
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.249T>G
  hgvsp: ENSP00000464203.1:p.Asp83Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.627T>G
  hgvsp: ENSP00000461960.1:p.Asp209Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.153T>G
  hgvsp: ENSP00000464446.1:p.Asp51Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-325T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-235T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.216T>G
  hgvsp: ENSP00000463836.1:p.Asp72Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.627T>G
  hgvsp: ENSP00000350072.5:p.Asp209Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.594T>G
  hgvsp: ENSP00000355190.3:p.Asp198Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.627T>G
  hgvsp: ENSP00000354855.3:p.Asp209Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.120T>G
  hgvsp: ENSP00000463291.1:p.Asp40Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.249T>G
  hgvsp: ENSP00000445811.1:p.Asp83Glu
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-235T>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-235T>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp209Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

17-46133869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133869
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133869
    reference: chr 17
allele count: 3
allele frequency: 2.471576866040534e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.221G>A
  hgvsp: ENSP00000463836.1:p.Gly74Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.632G>A
  hgvsp: ENSP00000461960.1:p.Gly211Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-230G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.158G>A
  hgvsp: ENSP00000464446.1:p.Gly53Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.632G>A
  hgvsp: ENSP00000354855.3:p.Gly211Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.254G>A
  hgvsp: ENSP00000445811.1:p.Gly85Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.254G>A
  hgvsp: ENSP00000464203.1:p.Gly85Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.599G>A
  hgvsp: ENSP00000355190.3:p.Gly200Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.632G>A
  hgvsp: ENSP00000350072.5:p.Gly211Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-230G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.125G>A
  hgvsp: ENSP00000463291.1:p.Gly42Asp
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-320G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-230G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly211Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

17-46133871-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133871
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133871
    reference: chr 17
allele count: 4
allele frequency: 3.295435821387378e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-228G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-228G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-318G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.634G>A
  hgvsp: ENSP00000350072.5:p.Glu212Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.223G>A
  hgvsp: ENSP00000463836.1:p.Glu75Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.160G>A
  hgvsp: ENSP00000464446.1:p.Glu54Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.127G>A
  hgvsp: ENSP00000463291.1:p.Glu43Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.256G>A
  hgvsp: ENSP00000464203.1:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.601G>A
  hgvsp: ENSP00000355190.3:p.Glu201Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.634G>A
  hgvsp: ENSP00000461960.1:p.Glu212Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-228G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.634G>A
  hgvsp: ENSP00000354855.3:p.Glu212Lys
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.256G>A
  hgvsp: ENSP00000445811.1:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu212Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

17-46133879-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133879
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133879
    reference: chr 17
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.135C>T
  hgvsp: ENST00000583378.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.168C>T
  hgvsp: ENST00000582155.1:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.264C>T
  hgvsp: ENST00000580050.1:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-310C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.609C>T
  hgvsp: ENST00000361665.3:c.609C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.642C>T
  hgvsp: ENST00000357480.5:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-220C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.231C>T
  hgvsp: ENST00000577431.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.642C>T
  hgvsp: ENST00000362042.3:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.642C>T
  hgvsp: ENST00000585291.1:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.264C>T
  hgvsp: ENST00000536222.1:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-220C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-220C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp214Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

17-46133886-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133886
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133886
    reference: chr 17
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.649G>T
  hgvsp: ENSP00000350072.5:p.Ala217Ser
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.649G>T
  hgvsp: ENSP00000461960.1:p.Ala217Ser
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.271G>T
  hgvsp: ENSP00000464203.1:p.Ala91Ser
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.649G>T
  hgvsp: ENSP00000354855.3:p.Ala217Ser
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.616G>T
  hgvsp: ENSP00000355190.3:p.Ala206Ser
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.238G>T
  hgvsp: ENSP00000463836.1:p.Ala80Ser
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-303G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.175G>T
  hgvsp: ENSP00000464446.1:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.271G>T
  hgvsp: ENSP00000445811.1:p.Ala91Ser
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-213G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-213G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-213G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.142G>T
  hgvsp: ENSP00000463291.1:p.Ala48Ser
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala217Ser
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum

17-46133891-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133891
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133891
    reference: chr 17
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.621C>G
  hgvsp: ENST00000361665.3:c.621C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-208C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.276C>G
  hgvsp: ENST00000536222.1:c.276C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.180C>G
  hgvsp: ENST00000582155.1:c.180C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-298C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.654C>G
  hgvsp: ENST00000357480.5:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.276C>G
  hgvsp: ENST00000580050.1:c.276C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.654C>G
  hgvsp: ENST00000585291.1:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.147C>G
  hgvsp: ENST00000583378.1:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-208C>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.654C>G
  hgvsp: ENST00000362042.3:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.243C>G
  hgvsp: ENST00000577431.1:c.243C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-208C>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly218Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-46133892-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133892
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133892
    reference: chr 17
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.181G>C
  hgvsp: ENSP00000464446.1:p.Glu61Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-207G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.277G>C
  hgvsp: ENSP00000464203.1:p.Glu93Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-207G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.655G>C
  hgvsp: ENSP00000354855.3:p.Glu219Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.655G>C
  hgvsp: ENSP00000461960.1:p.Glu219Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.622G>C
  hgvsp: ENSP00000355190.3:p.Glu208Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.277G>C
  hgvsp: ENSP00000445811.1:p.Glu93Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-297G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.148G>C
  hgvsp: ENSP00000463291.1:p.Glu50Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.244G>C
  hgvsp: ENSP00000463836.1:p.Glu82Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-207G>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.655G>C
  hgvsp: ENSP00000350072.5:p.Glu219Gln
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15316
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu219Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

17-46133897-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133897
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133897
    reference: chr 17
allele count: 10
allele frequency: 8.238861059847087e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-202C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.660C>T
  hgvsp: ENST00000362042.3:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.282C>T
  hgvsp: ENST00000536222.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.627C>T
  hgvsp: ENST00000361665.3:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-202C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-202C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.282C>T
  hgvsp: ENST00000580050.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-292C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.249C>T
  hgvsp: ENST00000577431.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.153C>T
  hgvsp: ENST00000583378.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.660C>T
  hgvsp: ENST00000585291.1:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.186C>T
  hgvsp: ENST00000582155.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.660C>T
  hgvsp: ENST00000357480.5:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
hgvs: p.Gly220Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

17-46133898-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133898
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133898
    reference: chr 17
allele count: 5
allele frequency: 4.11936265221045e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.628G>A
  hgvsp: ENSP00000355190.3:p.Ala210Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.154G>A
  hgvsp: ENSP00000463291.1:p.Ala52Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.661G>A
  hgvsp: ENSP00000350072.5:p.Ala221Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.283G>A
  hgvsp: ENSP00000464203.1:p.Ala95Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.661G>A
  hgvsp: ENSP00000461960.1:p.Ala221Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.283G>A
  hgvsp: ENSP00000445811.1:p.Ala95Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-201G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-201G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.187G>A
  hgvsp: ENSP00000464446.1:p.Ala63Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-291G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.250G>A
  hgvsp: ENSP00000463836.1:p.Ala84Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-201G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.661G>A
  hgvsp: ENSP00000354855.3:p.Ala221Thr
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala221Thr
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-46133905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133905
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133905
    reference: chr 17
allele count: 3
allele frequency: 2.471821237888076e-5
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.668C>T
  hgvsp: ENSP00000461960.1:p.Ala223Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.194C>T
  hgvsp: ENSP00000464446.1:p.Ala65Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.161C>T
  hgvsp: ENSP00000463291.1:p.Ala54Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.290C>T
  hgvsp: ENSP00000445811.1:p.Ala97Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.668C>T
  hgvsp: ENSP00000354855.3:p.Ala223Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.257C>T
  hgvsp: ENSP00000463836.1:p.Ala86Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-284C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-194C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.635C>T
  hgvsp: ENSP00000355190.3:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.668C>T
  hgvsp: ENSP00000350072.5:p.Ala223Val
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-194C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-194C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.290C>T
  hgvsp: ENSP00000464203.1:p.Ala97Val
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala223Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-46133910-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133910
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133910
    reference: chr 17
allele count: 16
allele frequency: 1.318391562294001e-4
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.673G>A
  hgvsp: ENSP00000461960.1:p.Ala225Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.199G>A
  hgvsp: ENSP00000464446.1:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.673G>A
  hgvsp: ENSP00000350072.5:p.Ala225Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.262G>A
  hgvsp: ENSP00000463836.1:p.Ala88Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.640G>A
  hgvsp: ENSP00000355190.3:p.Ala214Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.166G>A
  hgvsp: ENSP00000463291.1:p.Ala56Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.673G>A
  hgvsp: ENSP00000354855.3:p.Ala225Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-189G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-189G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.295G>A
  hgvsp: ENSP00000445811.1:p.Ala99Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-279G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.295G>A
  hgvsp: ENSP00000464203.1:p.Ala99Thr
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-189G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala225Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

17-46133914-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133914
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133914
    reference: chr 17
allele count: 7
allele frequency: 5.768533473975673e-5
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-185G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.677G>A
  hgvsp: ENSP00000461960.1:p.Arg226Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.299G>A
  hgvsp: ENSP00000445811.1:p.Arg100Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-185G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-275G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.266G>A
  hgvsp: ENSP00000463836.1:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.644G>A
  hgvsp: ENSP00000355190.3:p.Arg215Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.299G>A
  hgvsp: ENSP00000464203.1:p.Arg100Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.203G>A
  hgvsp: ENSP00000464446.1:p.Arg68Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.677G>A
  hgvsp: ENSP00000350072.5:p.Arg226Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-185G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.677G>A
  hgvsp: ENSP00000354855.3:p.Arg226Gln
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.170G>A
  hgvsp: ENSP00000463291.1:p.Arg57Gln
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg226Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

17-46133924-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133924
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133924
    reference: chr 17
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-175A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.654A>G
  hgvsp: ENST00000361665.3:c.654A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.687A>G
  hgvsp: ENST00000362042.3:c.687A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-175A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.309A>G
  hgvsp: ENST00000536222.1:c.309A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.213A>G
  hgvsp: ENST00000582155.1:c.213A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.309A>G
  hgvsp: ENST00000580050.1:c.309A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.180A>G
  hgvsp: ENST00000583378.1:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.276A>G
  hgvsp: ENST00000577431.1:c.276A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-175A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.687A>G
  hgvsp: ENST00000585291.1:c.687A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.687A>G
  hgvsp: ENST00000357480.5:c.687A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-265A>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu229Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

17-46133929-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133929
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133929
    reference: chr 17
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.692A>G
  hgvsp: ENSP00000461960.1:p.Asp231Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.218A>G
  hgvsp: ENSP00000464446.1:p.Asp73Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.185A>G
  hgvsp: ENSP00000463291.1:p.Asp62Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.692A>G
  hgvsp: ENSP00000354855.3:p.Asp231Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.314A>G
  hgvsp: ENSP00000445811.1:p.Asp105Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-170A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-170A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.281A>G
  hgvsp: ENSP00000463836.1:p.Asp94Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.659A>G
  hgvsp: ENSP00000355190.3:p.Asp220Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.314A>G
  hgvsp: ENSP00000464203.1:p.Asp105Gly
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-170A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-260A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.692A>G
  hgvsp: ENSP00000350072.5:p.Asp231Gly
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp231Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

17-46133942-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133942
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133942
    reference: chr 17
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.327G>A
  hgvsp: ENST00000536222.1:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.672G>A
  hgvsp: ENST00000361665.3:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.231G>A
  hgvsp: ENST00000582155.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.198G>A
  hgvsp: ENST00000583378.1:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.705G>A
  hgvsp: ENST00000362042.3:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-247G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.294G>A
  hgvsp: ENST00000577431.1:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.705G>A
  hgvsp: ENST00000357480.5:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-157G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464203
  ensembl transcript: ENST00000580050
  gene symbol: NFE2L1
  hgvsc: ENST00000580050.1:c.327G>A
  hgvsp: ENST00000580050.1:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.705G>A
  hgvsp: ENST00000585291.1:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-157G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-157G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly235Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

17-46133959-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133959
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133959
    reference: chr 17
allele count: 1
allele frequency: 8.382932349735938e-6
allele num: 119290
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.722A>G
  hgvsp: ENSP00000354855.3:p.Gln241Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.722A>G
  hgvsp: ENSP00000461960.1:p.Gln241Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.311A>G
  hgvsp: ENSP00000463836.1:p.Gln104Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.215A>G
  hgvsp: ENSP00000463291.1:p.Gln72Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.344A>G
  hgvsp: ENSP00000445811.1:p.Gln115Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.689A>G
  hgvsp: ENSP00000355190.3:p.Gln230Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-140A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-140A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.248A>G
  hgvsp: ENSP00000464446.1:p.Gln83Arg
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-140A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-230A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.722A>G
  hgvsp: ENSP00000350072.5:p.Gln241Arg
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln241Arg
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum

17-46133962-TAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133962
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133960
    reference: chr 17
allele count: 1
allele frequency: 8.425309630128907e-6
allele num: 118690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+3_249+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+3_-229+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+3_690+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+3_723+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+3_-139+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+3_345+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+3_-139+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+3_723+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+3_-139+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+3_216+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+3_312+4delAC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+3_723+4delAC
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.723+3_723+4delAC
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: TAC
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/17-46133965-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133965
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133965
    reference: chr 17
allele count: 1
allele frequency: 8.48838788537281e-6
allele num: 117808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+5C>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+5C>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.723+5C>A
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

17-46133965-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133965
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133965
    reference: chr 17
allele count: 1
allele frequency: 8.48838788537281e-6
allele num: 117808
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+5C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+5C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.723+5C>T
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

17-46133968-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133968
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133968
    reference: chr 17
allele count: 2
allele frequency: 1.711391018619934e-5
allele num: 116864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+8C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+8C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.723+8C>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-46133969-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133969
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133969
    reference: chr 17
allele count: 6
allele frequency: 5.136458583022292e-5
allele num: 116812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+9G>A
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+9G>A
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25089
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

17-46133969-GCCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133969
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133966
    reference: chr 17
allele count: 1
allele frequency: 8.560764305037153e-6
allele num: 116812
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+11_-139+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+11_-229+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+11_723+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+11_723+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+11_723+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+11_-139+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+11_216+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+11_-139+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+11_345+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+11_249+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+11_312+13delCCC
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+11_690+13delCCC
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11671
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: GCCC
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

17-46133972-C-CCTGCTCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133972
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133979
    reference: chr 17
allele count: 4
allele frequency: 3.446018126055343e-5
allele num: 116076
alternate allele: CCTGCTCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+16_216+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+16_690+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+16_-139+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+16_345+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+16_249+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+16_723+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+16_-139+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+16_312+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+16_723+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+16_723+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+16_-229+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+16_-139+22dupCTCACTG
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11043
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

17-46133979-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133979
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133979
    reference: chr 17
allele count: 3
allele frequency: 2.623432499081799e-5
allele num: 114354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+19A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+19A>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-46133985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133985
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133985
    reference: chr 17
allele count: 1
allele frequency: 8.860221151119932e-6
allele num: 112864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+25C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+25C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

17-46133995-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133995
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133995
    reference: chr 17
allele count: 4
allele frequency: 3.614544928793465e-5
allele num: 110664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+35G>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+35G>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11192
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13143
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

17-46133999-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46133999
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46133999
    reference: chr 17
allele count: 1
allele frequency: 9.130585635762679e-6
allele num: 109522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+39C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+39C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13636
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-46134000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46134000
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46134000
    reference: chr 17
allele count: 1
allele frequency: 9.16976910521393e-6
allele num: 109054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+40T>C
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+40T>C
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

17-46134004-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46134004
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46134004
    reference: chr 17
allele count: 1
allele frequency: 9.35698779848791e-6
allele num: 106872
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+44A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+44A>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9893
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

17-46134005-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46134005
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46134005
    reference: chr 17
allele count: 1
allele frequency: 9.274373052381659e-6
allele num: 107824
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-139+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-229+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.723+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.312+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.249+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.345+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-139+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.216+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.690+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.723+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.723+45C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-139+45C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10003
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

17-46134344-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46134344
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46134344
    reference: chr 17
allele count: 1
allele frequency: 8.952711776397071e-6
allele num: 111698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-138-362C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-228-50C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-138-362C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.691-50C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.724-362C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.250-362C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.217-362C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.346-362C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.724-50C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-138-362C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.313-362C>T
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.724-362C>T
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16123
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12072
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

17-46134354-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46134354
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 46134354
    reference: chr 17
allele count: 2
allele frequency: 1.775126921574893e-5
allele num: 112668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462610
  ensembl transcript: ENST00000577411
  gene symbol: NFE2L1
  hgvsc: ENST00000577411.1:c.-138-352A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000350072
  ensembl transcript: ENST00000357480
  gene symbol: NFE2L1
  hgvsc: ENST00000357480.5:c.724-352A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000354855
  ensembl transcript: ENST00000362042
  gene symbol: NFE2L1
  hgvsc: ENST00000362042.3:c.724-40A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464018
  ensembl transcript: ENST00000583210
  gene symbol: NFE2L1
  hgvsc: ENST00000583210.1:c.-138-352A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000462971
  ensembl transcript: ENST00000584634
  gene symbol: NFE2L1
  hgvsc: ENST00000584634.1:c.-228-40A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000355190
  ensembl transcript: ENST00000361665
  gene symbol: NFE2L1
  hgvsc: ENST00000361665.3:c.691-40A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000464446
  ensembl transcript: ENST00000582155
  gene symbol: NFE2L1
  hgvsc: ENST00000582155.1:c.250-352A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000445811
  ensembl transcript: ENST00000536222
  gene symbol: NFE2L1
  hgvsc: ENST00000536222.1:c.346-352A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463291
  ensembl transcript: ENST00000583378
  gene symbol: NFE2L1
  hgvsc: ENST00000583378.1:c.217-352A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463836
  ensembl transcript: ENST00000577431
  gene symbol: NFE2L1
  hgvsc: ENST00000577431.1:c.313-352A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000463744
  ensembl transcript: ENST00000580037
  gene symbol: NFE2L1
  hgvsc: ENST00000580037.1:c.-138-352A>G
  variant of: http://identifiers.org/hgnc/7781
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000082641
  ensembl protein: ENSP00000461960
  ensembl transcript: ENST00000585291
  gene symbol: NFE2L1
  hgvsc: ENST00000585291.1:c.724-352A>G
  variant of: http://identifiers.org/hgnc/7781
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21850
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6879
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

GenotypeDepth
all individuals: 29
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 33
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2528
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 2478
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 8.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 3.623188405797102e-2
allele num: 138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.675368898978433e-4
allele num: 1762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.879699248120301e-4
allele num: 5320
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.006e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.94e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.2107e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

DP
type: SiteQuality
SIO_000300: 9.3001e4

VQSLOD
type: SiteQuality
SIO_000300: -2.137e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.54e-1

GenotypeDepth
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2779
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.657789613848203e-4
allele num: 1502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.19e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.422e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.606e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.451e0

DP
type: SiteQuality
SIO_000300: 7.5362e4

QD
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1963
bin: 7.5e0
variant carriers: 159

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 221
bin: 3.25e1
variant carriers: 14

GenotypeQuality
all individuals: 128
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 226
bin: 2.75e1
variant carriers: 13

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 25

GenotypeQuality
all individuals: 29
bin: 8.75e1
variant carriers: 28

GenotypeQuality
all individuals: 1429
bin: 7.5e0
variant carriers: 39

GenotypeQuality
all individuals: 20
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 463
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 24

GenotypeQuality
all individuals: 30
bin: 9.25e1
variant carriers: 30

GenotypeQuality
all individuals: 375
bin: 6.25e1
variant carriers: 22

GenotypeQuality
all individuals: 843
bin: 9.75e1
variant carriers: 843

GenotypeQuality
all individuals: 2605
bin: 2.25e1
variant carriers: 22

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 19

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 20

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 20

GenotypeQuality
all individuals: 34
bin: 8.25e1
variant carriers: 34

GenotypeQuality
all individuals: 25
bin: 7.75e1
variant carriers: 23

GenotypeQuality
all individuals: 35
bin: 6.75e1
variant carriers: 21

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 13

Latino
type: Population
allele count: 12
allele frequency: 2.4e-1
allele num: 50
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.666666666666667e-1
allele num: 66
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.25e-1
allele num: 96
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 309
allele frequency: 2.145833333333333e-1
allele num: 1440
num of homozygotes: 24

South Asian
type: Population
allele count: 735
allele frequency: 1.722925457102672e-1
allele num: 4266
num of homozygotes: 48

VQSLOD
type: SiteQuality
SIO_000300: 4.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 1.759e0

DP
type: SiteQuality
SIO_000300: 6.9331e4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.424e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.15e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3372
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.135e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.35e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.838e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.5236e4

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2830
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2819
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 251
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.611170784103115e-3
allele num: 1862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 4.2338e4

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.59e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

GenotypeDepth
all individuals: 432
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2277
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2017
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4622
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.660000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.078e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 3.392e4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

QD
type: SiteQuality
SIO_000300: 5.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 458
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6172
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.740000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.722e1

DP
type: SiteQuality
SIO_000300: 2.1899e4

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 776
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-1

QD
type: SiteQuality
SIO_000300: 1.129e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.400000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.9275e4

MQ
type: SiteQuality
SIO_000300: 5.382e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeDepth
all individuals: 1520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 679
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 440
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9451
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 6.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.598e0

QD
type: SiteQuality
SIO_000300: 1.471e1

DP
type: SiteQuality
SIO_000300: 1.850034e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeDepth
all individuals: 696
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37736
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3629
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9452
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.118765947575968e-4
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.514e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.83e-1

DP
type: SiteQuality
SIO_000300: 1.853955e6

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

GenotypeDepth
all individuals: 387
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2412
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38600
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3620
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 263
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9509
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66364
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.718172983479106e-5
allele num: 10290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.652e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.336e0

DP
type: SiteQuality
SIO_000300: 1.859446e6

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.675e1

MQ
type: SiteQuality
SIO_000300: 6.024e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

GenotypeDepth
all individuals: 671
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4111
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3620
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39044
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506024096385542e-5
allele num: 66400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: 7.33e-1

FS
type: SiteQuality
SIO_000300: 1.987e0

QD
type: SiteQuality
SIO_000300: 1.249e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.864482e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.201e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

GenotypeDepth
all individuals: 196
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39288
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3620
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214771622934888e-4
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.867077e6

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

QD
type: SiteQuality
SIO_000300: 1.388e1

FS
type: SiteQuality
SIO_000300: 3.3e0

GenotypeDepth
all individuals: 27024
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 669
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15282
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3619
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 187
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39401
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.446e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.18e0

QD
type: SiteQuality
SIO_000300: 1.284e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 1.868478e6

VQSLOD
type: SiteQuality
SIO_000300: -3.351e0

FS
type: SiteQuality
SIO_000300: 2.301e0

MQRankSum
type: SiteQuality
SIO_000300: -2.171e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1521
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39519
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2493
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3618
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2432
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9589
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.8e-1

FS
type: SiteQuality
SIO_000300: 4.318e0

VQSLOD
type: SiteQuality
SIO_000300: -4.058e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.008e0

DP
type: SiteQuality
SIO_000300: 1.869898e6

MQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9678
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3617
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2435
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39579
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.332e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

MQ
type: SiteQuality
SIO_000300: 5.989e1

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.331e-1

FS
type: SiteQuality
SIO_000300: 7.675e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

DP
type: SiteQuality
SIO_000300: 1.87056e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 666
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 9695
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39604
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3616
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9599
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001140216641162e-5
allele num: 66654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.009e0

QD
type: SiteQuality
SIO_000300: 1.216e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

DP
type: SiteQuality
SIO_000300: 1.871493e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeDepth
all individuals: 9697
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 661
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3610
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9602
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39610
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.869773e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.144e0

MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

FS
type: SiteQuality
SIO_000300: 4.381e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e0

VQSLOD
type: SiteQuality
SIO_000300: -5.658e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.071e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.006e0

GenotypeDepth
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4114
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 660
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3609
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39618
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9606
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2434
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

FS
type: SiteQuality
SIO_000300: 7.933e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.49e1

MQRankSum
type: SiteQuality
SIO_000300: -1.66e-1

DP
type: SiteQuality
SIO_000300: 1.87022e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.975e0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9704
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39617
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9607
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3608
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.498830304120928e-5
allele num: 66684
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.33e1

DP
type: SiteQuality
SIO_000300: 1.870299e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 1.142e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 657
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 696
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9703
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1521
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3605
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39622
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9608
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.746e0

VQSLOD
type: SiteQuality
SIO_000300: -8.714e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.738e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e0

QD
type: SiteQuality
SIO_000300: 1.447e1

DP
type: SiteQuality
SIO_000300: 1.869647e6

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4114
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15302
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9701
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39629
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9608
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3604
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.345e-1

FS
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.215e1

MQRankSum
type: SiteQuality
SIO_000300: -2.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 1.869351e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e0

GenotypeDepth
all individuals: 107
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27117
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4114
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3604
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9608
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39639
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.332e1

DP
type: SiteQuality
SIO_000300: 1.869843e6

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeDepth
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15304
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4114
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 656
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39639
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3604
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9608
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999130252226854e-5
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

DP
type: SiteQuality
SIO_000300: 1.869843e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.332e1

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 652
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2494
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39646
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 1.841e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.491e0

DP
type: SiteQuality
SIO_000300: 1.868891e6

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

GenotypeDepth
all individuals: 107
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4112
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1518
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39654
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9613
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3596
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.868566e6

QD
type: SiteQuality
SIO_000300: 1.507e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 1.0105e1

VQSLOD
type: SiteQuality
SIO_000300: -3.497e-1

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1518
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3595
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.44e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.478e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.48e0

MQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

DP
type: SiteQuality
SIO_000300: 1.868671e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.673e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27143
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3593
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 3.591e0

DP
type: SiteQuality
SIO_000300: 1.868229e6

VQSLOD
type: SiteQuality
SIO_000300: -9.573e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.258e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-3

MQ
type: SiteQuality
SIO_000300: 5.884e1

GenotypeDepth
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27146
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9613
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3593
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39661
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998320940273447e-5
allele num: 66704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.584e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.93e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 1.868112e6

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4111
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3591
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9613
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39678
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998231043684226e-5
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.441e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

DP
type: SiteQuality
SIO_000300: 1.867963e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeDepth
all individuals: 645
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39656
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3590
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.426e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

QD
type: SiteQuality
SIO_000300: 1.341e1

FS
type: SiteQuality
SIO_000300: 5.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

DP
type: SiteQuality
SIO_000300: 1.867594e6

GenotypeDepth
all individuals: 695
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4111
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9617
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3586
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39683
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.48e0

MQRankSum
type: SiteQuality
SIO_000300: -7.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

VQSLOD
type: SiteQuality
SIO_000300: 4.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.522e1

DP
type: SiteQuality
SIO_000300: 1.867035e6

FS
type: SiteQuality
SIO_000300: 1.223e0

GenotypeDepth
all individuals: 4111
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9704
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39689
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.012e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.012e1

QD
type: SiteQuality
SIO_000300: 1.259e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e0

MQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.129e-1

DP
type: SiteQuality
SIO_000300: 1.866869e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.662e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 4113
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1519
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 640
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9627
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39675
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.56e-1

QD
type: SiteQuality
SIO_000300: 1.379e1

FS
type: SiteQuality
SIO_000300: 6.44e-1

DP
type: SiteQuality
SIO_000300: 1.866825e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.103e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.174e0

MQ
type: SiteQuality
SIO_000300: 5.991e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeDepth
all individuals: 69
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27179
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39670
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9632
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3584
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.86e-1

FS
type: SiteQuality
SIO_000300: 1.689e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

DP
type: SiteQuality
SIO_000300: 1.866702e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.318e1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15313
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4111
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2501
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9633
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39673
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496402877697842e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.297e1

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.866571e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.260999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.139e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 695
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9686
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39671
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9635
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997691777331455e-5
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

DP
type: SiteQuality
SIO_000300: 1.866128e6

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.642e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.991e1

FS
type: SiteQuality
SIO_000300: 2.618e0

QD
type: SiteQuality
SIO_000300: 1.48e1

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9692
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 695
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39686
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.622e0

QD
type: SiteQuality
SIO_000300: 1.314e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 1.865502e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15316
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9644
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3576
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.117e0

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

DP
type: SiteQuality
SIO_000300: 1.865291e6

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

FS
type: SiteQuality
SIO_000300: 7.62e-1

QD
type: SiteQuality
SIO_000300: 1.409e1

MQ
type: SiteQuality
SIO_000300: 5.935e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.476e0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1518
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 695
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39665
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

DP
type: SiteQuality
SIO_000300: 1.865058e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.24e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

QD
type: SiteQuality
SIO_000300: 1.66e1

VQSLOD
type: SiteQuality
SIO_000300: 2.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.37e-1

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4112
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.864925e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.328e-1

FS
type: SiteQuality
SIO_000300: 4.358e0

MQRankSum
type: SiteQuality
SIO_000300: -1.532e0

QD
type: SiteQuality
SIO_000300: 1.575e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

GenotypeDepth
all individuals: 149
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15313
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1518
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4112
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3573
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 2443
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9646
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.91323885240235e-4
allele num: 11572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

DP
type: SiteQuality
SIO_000300: 1.864711e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.427e1

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27204
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39672
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3564
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2443
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.884615384615385e-4
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.636e0

VQSLOD
type: SiteQuality
SIO_000300: 4.76e0

QD
type: SiteQuality
SIO_000300: 1.308e1

DP
type: SiteQuality
SIO_000300: 1.863711e6

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15309
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 614
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 287
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39676
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3559
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496807266840543e-5
allele num: 66714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.77e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.506e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

DP
type: SiteQuality
SIO_000300: 1.862827e6

FS
type: SiteQuality
SIO_000300: 9.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.205e0

GenotypeDepth
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 694
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 287
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.037165082108902e-3
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49734656552634e-5
allele num: 66706
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.638e0

VQSLOD
type: SiteQuality
SIO_000300: 4.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.292e1

DP
type: SiteQuality
SIO_000300: 1.862323e6

GenotypeDepth
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 287
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 598
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 39666
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9649
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2493
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3540
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.050129645635263e-4
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.271e0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 1.860622e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.961e0

QD
type: SiteQuality
SIO_000300: 1.452e1

GenotypeDepth
all individuals: 593
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 387
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15283
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39604
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9642
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.822e1

FS
type: SiteQuality
SIO_000300: 5.694e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.14e-1

DP
type: SiteQuality
SIO_000300: 1.85895e6

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: -1.712e-1

GenotypeDepth
all individuals: 387
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1516
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 287
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39578
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3532
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -7.73e-1

DP
type: SiteQuality
SIO_000300: 1.858173e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 7.056e0

QD
type: SiteQuality
SIO_000300: 1.823e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.198e0

GenotypeDepth
all individuals: 266
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1499
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 285
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2467
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9559
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2397
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39397
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504257047444267e-5
allele num: 66478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.567e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: -7.31e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.43e-1

DP
type: SiteQuality
SIO_000300: 1.851659e6

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

GenotypeDepth
all individuals: 105
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 643
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 350
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37541
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2227
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8847
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529098749197223e-5
allele num: 65398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.48e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.795103e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.82e-1

QD
type: SiteQuality
SIO_000300: 1.459e1

FS
type: SiteQuality
SIO_000300: 4.571e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1356
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36720
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2981
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8752
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65050
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.091617933723197e-5
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.633e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.785e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

DP
type: SiteQuality
SIO_000300: 1.775167e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1313
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35270
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3474
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3903
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548850752741466e-5
allele num: 64564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.744621e6

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

QD
type: SiteQuality
SIO_000300: 1.556e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.824e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.334e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e0

GenotypeDepth
all individuals: 12794
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 826
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3903
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3474
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35270
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548850752741466e-5
allele num: 64564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11108
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.334e-1

DP
type: SiteQuality
SIO_000300: 1.744621e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

QD
type: SiteQuality
SIO_000300: 1.556e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.824e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 274
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 148
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3469
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4876
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560403208188996e-5
allele num: 64086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.219512195121951e-4
allele num: 8200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e0

FS
type: SiteQuality
SIO_000300: 6.088e0

DP
type: SiteQuality
SIO_000300: 1.705866e6

QD
type: SiteQuality
SIO_000300: 1.193e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

GenotypeDepth
all individuals: 1100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2105
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8059
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4930
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3471
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.746246796045405e-4
allele num: 10924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.68384074941452e-5
allele num: 64050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.868e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-1

FS
type: SiteQuality
SIO_000300: 3.567e0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.272e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

DP
type: SiteQuality
SIO_000300: 1.703062e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

GenotypeDepth
all individuals: 4284
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8059
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2105
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3471
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4930
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64050
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.221597849987784e-4
allele num: 8186
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.272e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.868e0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

FS
type: SiteQuality
SIO_000300: 3.567e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.703062e6

GenotypeDepth
all individuals: 119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32425
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5785
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3464
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1188
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.285947763774083e-5
allele num: 63634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10802
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

MQ
type: SiteQuality
SIO_000300: 5.293e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

FS
type: SiteQuality
SIO_000300: 4.987e0

QD
type: SiteQuality
SIO_000300: 6.56e0

DP
type: SiteQuality
SIO_000300: 1.673043e6

MQRankSum
type: SiteQuality
SIO_000300: -2.971e0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

GenotypeDepth
all individuals: 8878
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3454
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6655
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7579
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1821
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28825
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.190810465858328e-5
allele num: 62680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.00060036021613e-4
allele num: 9994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.098e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 1.137e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.581316e6

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

GenotypeDepth
all individuals: 147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3439
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 561
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8748
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2990
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2406
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5908
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3938
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.617180930202471e-5
allele num: 61836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6034
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.356e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.374e0

DP
type: SiteQuality
SIO_000300: 1.496351e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.555e1

GenotypeDepth
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9050
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4734
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4246
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1418
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3436
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 135
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17039
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5948
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.594783526230752e-5
allele num: 60654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.081e1

DP
type: SiteQuality
SIO_000300: 1.383515e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.914e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

GenotypeDepth
all individuals: 591
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1315
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2224
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6429
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14483
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8858
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2210
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5647
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3433
bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.268020559107433e-5
allele num: 15954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.284e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

DP
type: SiteQuality
SIO_000300: 1.349017e6

VQSLOD
type: SiteQuality
SIO_000300: -2.089e0

MQRankSum
type: SiteQuality
SIO_000300: -9.379999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5855
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8702
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13395
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2421
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3617
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4203
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.672744304305644e-5
allele num: 59782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5800
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e0

MQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.339266e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 8.805999999999999e0

QD
type: SiteQuality
SIO_000300: 1.212e1

GenotypeDepth
all individuals: 109
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7822
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4180
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1451
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6683
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9314
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6379
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1874
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.700795972515137e-5
allele num: 58796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
SIO_000300: 1.175e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 1.311978e6

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 675
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3865
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6762
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8238
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6340
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2976
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10657
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.687991627561527e-5
allele num: 59242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9440
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.873e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.386e0

QD
type: SiteQuality
SIO_000300: 1.455e1

DP
type: SiteQuality
SIO_000300: 1.310081e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeDepth
all individuals: 89
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3390
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6206
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3448
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4664
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5962
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11315
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5025
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6748
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3164
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.384384384384384e-5
allele num: 10656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.491e0

FS
type: SiteQuality
SIO_000300: 1.0789e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.22387e6

VQSLOD
type: SiteQuality
SIO_000300: -1.695e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

QD
type: SiteQuality
SIO_000300: 2.892e1

GenotypeDepth
all individuals: 1086
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2768
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5159
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24571
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3396
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1988
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.203074951953876e-5
allele num: 62440
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.072e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3