17-37873743-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37873743
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37873743
    reference: chr 17
allele count: 3
allele frequency: 2.514584590625629e-5
allele num: 119304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.507+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462808
  ensembl transcript: ENST00000578199
  gene symbol: ERBB2
  hgvsc: ENST00000578199.1:c.*6A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1808+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.138+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1070+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1898+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1808+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1853+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446382
  ensembl transcript: ENST00000540042
  gene symbol: ERBB2
  hgvsc: ENST00000540042.1:c.*6A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1688+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.216+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1808+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3032+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1898+10A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000582788
  gene symbol: ERBB2
  hgvsc: ENST00000582788.1:n.1839A>G
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-37873745-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37873745
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37873745
    reference: chr 17
allele count: 10
allele frequency: 8.395600705230459e-5
allele num: 119110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.507+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1853+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.216+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.138+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1808+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1688+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446382
  ensembl transcript: ENST00000540042
  gene symbol: ERBB2
  hgvsc: ENST00000540042.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462808
  ensembl transcript: ENST00000578199
  gene symbol: ERBB2
  hgvsc: ENST00000578199.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000582788
  gene symbol: ERBB2
  hgvsc: ENST00000582788.1:n.1841G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1070+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1898+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1808+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1808+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1898+12G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3032+12G>A
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

17-37873746-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37873746
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37873746
    reference: chr 17
allele count: 2
allele frequency: 1.679571373385512e-5
allele num: 119078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1808+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3032+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.507+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1808+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1853+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446382
  ensembl transcript: ENST00000540042
  gene symbol: ERBB2
  hgvsc: ENST00000540042.1:c.*9G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1898+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1808+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1898+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.216+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462808
  ensembl transcript: ENST00000578199
  gene symbol: ERBB2
  hgvsc: ENST00000578199.1:c.*9G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000582788
  gene symbol: ERBB2
  hgvsc: ENST00000582788.1:n.1842G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1070+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1688+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+13G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.138+13G>T
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16056
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/17-37873757-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37873757
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37873757
    reference: chr 17
allele count: 2
allele frequency: 1.688105607886829e-5
allele num: 118476
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1808+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462808
  ensembl transcript: ENST00000578199
  gene symbol: ERBB2
  hgvsc: ENST00000578199.1:c.*20A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446382
  ensembl transcript: ENST00000540042
  gene symbol: ERBB2
  hgvsc: ENST00000540042.1:c.*20A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1808+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1070+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1898+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1688+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000582788
  gene symbol: ERBB2
  hgvsc: ENST00000582788.1:n.1853A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.216+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.138+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.507+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1853+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3032+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1898+24A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1808+24A>C
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

17-37873768-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37873768
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37873768
    reference: chr 17
allele count: 2
allele frequency: 1.702330490441414e-5
allele num: 117486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1688+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1070+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1898+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1808+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446382
  ensembl transcript: ENST00000540042
  gene symbol: ERBB2
  hgvsc: ENST00000540042.1:c.*31C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.216+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1808+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.507+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000582788
  gene symbol: ERBB2
  hgvsc: ENST00000582788.1:n.1864C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3032+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1898+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1853+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462808
  ensembl transcript: ENST00000578199
  gene symbol: ERBB2
  hgvsc: ENST00000578199.1:c.*31C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.138+35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1808+35C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

17-37873770-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37873770
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37873770
    reference: chr 17
allele count: 1
allele frequency: 8.516871923280018e-6
allele num: 117414
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1898+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3032+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.138+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1898+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1853+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000582788
  gene symbol: ERBB2
  hgvsc: ENST00000582788.1:n.1866T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1070+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1808+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.507+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446382
  ensembl transcript: ENST00000540042
  gene symbol: ERBB2
  hgvsc: ENST00000540042.1:c.*33T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462808
  ensembl transcript: ENST00000578199
  gene symbol: ERBB2
  hgvsc: ENST00000578199.1:c.*33T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.216+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1808+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1808+37T>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1688+37T>A
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

17-37873772-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37873772
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37873772
    reference: chr 17
allele count: 1
allele frequency: 8.531986417077625e-6
allele num: 117206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1688+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1898+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3032+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000582788
  gene symbol: ERBB2
  hgvsc: ENST00000582788.1:n.1868C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462808
  ensembl transcript: ENST00000578199
  gene symbol: ERBB2
  hgvsc: ENST00000578199.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1853+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1808+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1808+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1898+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.216+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.507+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1070+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1808+39C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446382
  ensembl transcript: ENST00000540042
  gene symbol: ERBB2
  hgvsc: ENST00000540042.1:c.*35C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.138+39C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

17-37873782-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37873782
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37873782
    reference: chr 17
allele count: 2
allele frequency: 1.736352271148771e-5
allele num: 115184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1688+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462808
  ensembl transcript: ENST00000578199
  gene symbol: ERBB2
  hgvsc: ENST00000578199.1:c.*45G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.216+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.507+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446382
  ensembl transcript: ENST00000540042
  gene symbol: ERBB2
  hgvsc: ENST00000540042.1:c.*45G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1898+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1808+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1808+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1898+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000582788
  gene symbol: ERBB2
  hgvsc: ENST00000582788.1:n.1878G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1070+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1808+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.138+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1853+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3032+49G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+49G>A
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23602
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

17-37875990-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37875990
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37875990
    reference: chr 17
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3033-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1071-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1854-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2257T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1809-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1809-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.217-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1899-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.508-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1899-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1809-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.139-50T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1689-50T>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5894
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

http://identifiers.org/exac.variant/17-37875995-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37875995
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37875995
    reference: chr 17
allele count: 6
allele frequency: 4.943642475776152e-5
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1809-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.139-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1071-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1899-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1689-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.217-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3033-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1899-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2262A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1854-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.508-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1809-45A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1809-45A>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-37875997-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37875997
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37875997
    reference: chr 17
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2264A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1809-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.217-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1809-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1809-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.139-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3033-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.508-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1071-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1899-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1854-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1689-43A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1899-43A>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

17-37876001-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876001
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876001
    reference: chr 17
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1899-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1899-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.508-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.217-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2268T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1809-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3033-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1809-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1854-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1071-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1689-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1809-39T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.139-39T>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

17-37876016-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876016
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876016
    reference: chr 17
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1809-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.508-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1899-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3033-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1689-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2283T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1809-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.217-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1854-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1071-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.139-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1809-24T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1899-24T>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

17-37876018-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876018
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876018
    reference: chr 17
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1854-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.217-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1899-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1689-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.508-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1809-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2285G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.139-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3033-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1809-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1809-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1071-22G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1899-22G>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

17-37876024-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876024
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876024
    reference: chr 17
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1689-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1899-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1899-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1809-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3033-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.217-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1809-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.139-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.508-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2291A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1854-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1071-16A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1809-16A>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

17-37876027-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876027
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876028
    reference: chr 17
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.217-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1809-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3033-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1809-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1899-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1899-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.508-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1071-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2297dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1809-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1854-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.139-10dupT
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1689-10dupT
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

17-37876067-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876067
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876067
    reference: chr 17
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1716C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1926C>T
  hgvsp: ENST00000584450.1:c.1926C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.244C>T
  hgvsp: ENST00000582818.1:c.244C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1098C>T
  hgvsp: ENST00000445658.2:c.1098C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1881C>T
  hgvsp: ENST00000541774.1:c.1881C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1836C>T
  hgvsp: ENST00000406381.2:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1926C>T
  hgvsp: ENST00000269571.5:c.1926C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1836C>T
  hgvsp: ENST00000540147.1:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1836C>T
  hgvsp: ENST00000584601.1:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3060C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.166C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.535C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2334C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Cys642Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

17-37876069-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876069
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876069
    reference: chr 17
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1838C>G
  hgvsp: ENSP00000443562.1:p.Pro613Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1838C>G
  hgvsp: ENSP00000462438.1:p.Pro613Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1838C>G
  hgvsp: ENSP00000385185.2:p.Pro613Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1883C>G
  hgvsp: ENSP00000446466.1:p.Pro628Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.537C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1928C>G
  hgvsp: ENSP00000269571.4:p.Pro643Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1718C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3062C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.168C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1928C>G
  hgvsp: ENSP00000463714.1:p.Pro643Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1100C>G
  hgvsp: ENSP00000404047.2:p.Pro367Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.246C>G
  hgvsp: ENSP00000464252.1:p.Pro83Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2336C>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro643Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

17-37876070-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876070
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876070
    reference: chr 17
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1839C>G
  hgvsp: ENST00000406381.2:c.1839C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.247C>G
  hgvsp: ENST00000582818.1:c.247C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.169C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2337C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1929C>G
  hgvsp: ENST00000269571.5:c.1929C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1101C>G
  hgvsp: ENST00000445658.2:c.1101C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1929C>G
  hgvsp: ENST00000584450.1:c.1929C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1839C>G
  hgvsp: ENST00000540147.1:c.1839C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1884C>G
  hgvsp: ENST00000541774.1:c.1884C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1719C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1839C>G
  hgvsp: ENST00000584601.1:c.1839C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.538C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3063C>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro643Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD

17-37876070-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876070
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876070
    reference: chr 17
allele count: 69
allele frequency: 5.684064847765915e-4
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1929C>T
  hgvsp: ENST00000269571.5:c.1929C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1839C>T
  hgvsp: ENST00000540147.1:c.1839C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.169C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2337C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3063C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1839C>T
  hgvsp: ENST00000406381.2:c.1839C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1101C>T
  hgvsp: ENST00000445658.2:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.247C>T
  hgvsp: ENST00000582818.1:c.247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1884C>T
  hgvsp: ENST00000541774.1:c.1884C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.538C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1839C>T
  hgvsp: ENST00000584601.1:c.1839C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1929C>T
  hgvsp: ENST00000584450.1:c.1929C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1719C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4951
  bin: 9.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro643Pro
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

17-37876071-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876071
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876071
    reference: chr 17
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.170G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.539G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3064G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1840G>A
  hgvsp: ENSP00000462438.1:p.Ala614Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1840G>A
  hgvsp: ENSP00000385185.2:p.Ala614Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1885G>A
  hgvsp: ENSP00000446466.1:p.Ala629Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1930G>A
  hgvsp: ENSP00000269571.4:p.Ala644Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1720G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2338G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.248G>A
  hgvsp: ENSP00000464252.1:p.Ala84Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1930G>A
  hgvsp: ENSP00000463714.1:p.Ala644Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1840G>A
  hgvsp: ENSP00000443562.1:p.Ala614Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1102G>A
  hgvsp: ENSP00000404047.2:p.Ala368Thr
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala644Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-37876073-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876073
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876073
    reference: chr 17
allele count: 52
allele frequency: 4.283713650218305e-4
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1104C>T
  hgvsp: ENST00000445658.2:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1932C>T
  hgvsp: ENST00000269571.5:c.1932C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.250C>T
  hgvsp: ENST00000582818.1:c.250C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1722C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1887C>T
  hgvsp: ENST00000541774.1:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1842C>T
  hgvsp: ENST00000406381.2:c.1842C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1842C>T
  hgvsp: ENST00000540147.1:c.1842C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2340C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3066C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1842C>T
  hgvsp: ENST00000584601.1:c.1842C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.541C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1932C>T
  hgvsp: ENST00000584450.1:c.1932C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.172C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Ala644Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

17-37876074-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876074
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876074
    reference: chr 17
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1888G>A
  hgvsp: ENSP00000446466.1:p.Glu630Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1843G>A
  hgvsp: ENSP00000443562.1:p.Glu615Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1843G>A
  hgvsp: ENSP00000385185.2:p.Glu615Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1843G>A
  hgvsp: ENSP00000462438.1:p.Glu615Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2341G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1723G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.542G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.173G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.251G>A
  hgvsp: ENSP00000464252.1:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1105G>A
  hgvsp: ENSP00000404047.2:p.Glu369Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1933G>A
  hgvsp: ENSP00000269571.4:p.Glu645Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1933G>A
  hgvsp: ENSP00000463714.1:p.Glu645Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3067G>A
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu645Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

17-37876081-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876081
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876081
    reference: chr 17
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1850G>A
  hgvsp: ENSP00000385185.2:p.Arg617Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.180G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1940G>A
  hgvsp: ENSP00000463714.1:p.Arg647Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1730G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1112G>A
  hgvsp: ENSP00000404047.2:p.Arg371Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1940G>A
  hgvsp: ENSP00000269571.4:p.Arg647Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1850G>A
  hgvsp: ENSP00000462438.1:p.Arg617Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1850G>A
  hgvsp: ENSP00000443562.1:p.Arg617Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.549G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2348G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.258G>A
  hgvsp: ENSP00000464252.1:p.Arg87Lys
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3074G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1895G>A
  hgvsp: ENSP00000446466.1:p.Arg632Lys
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg647Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

17-37876081-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876081
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876081
    reference: chr 17
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2348G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1112G>C
  hgvsp: ENSP00000404047.2:p.Arg371Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1940G>C
  hgvsp: ENSP00000269571.4:p.Arg647Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1895G>C
  hgvsp: ENSP00000446466.1:p.Arg632Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.549G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1850G>C
  hgvsp: ENSP00000443562.1:p.Arg617Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.258G>C
  hgvsp: ENSP00000464252.1:p.Arg87Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1940G>C
  hgvsp: ENSP00000463714.1:p.Arg647Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1730G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3074G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1850G>C
  hgvsp: ENSP00000462438.1:p.Arg617Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1850G>C
  hgvsp: ENSP00000385185.2:p.Arg617Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.180G>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg647Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

17-37876083-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876083
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876083
    reference: chr 17
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1852G>A
  hgvsp: ENSP00000385185.2:p.Ala618Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1852G>A
  hgvsp: ENSP00000443562.1:p.Ala618Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1942G>A
  hgvsp: ENSP00000463714.1:p.Ala648Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1114G>A
  hgvsp: ENSP00000404047.2:p.Ala372Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.260G>A
  hgvsp: ENSP00000464252.1:p.Ala88Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.551G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2350G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1942G>A
  hgvsp: ENSP00000269571.4:p.Ala648Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1852G>A
  hgvsp: ENSP00000462438.1:p.Ala618Thr
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3076G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.182G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1732G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1897G>A
  hgvsp: ENSP00000446466.1:p.Ala633Thr
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala648Thr
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

17-37876098-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876098
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876098
    reference: chr 17
allele count: 15
allele frequency: 1.235910618944038e-4
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2365A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.197A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+11A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+11A>G
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6293
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

17-37876103-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876103
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876102
    reference: chr 17
allele count: 10
allele frequency: 8.239539904091755e-5
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.204delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2372delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+18delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+18delG
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: AG
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-37876106-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876106
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876106
    reference: chr 17
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.205A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2373A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+19A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+19A>G
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5909
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

17-37876107-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876107
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876107
    reference: chr 17
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.206T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2374T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+20T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+20T>C
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

17-37876107-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876107
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876106
    reference: chr 17
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.207delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2375delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+21delG
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+21delG
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5909
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4883
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: TG
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

17-37876108-G-GTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876108
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876110
    reference: chr 17
allele count: 124
allele frequency: 1.021736622666073e-3
allele num: 121362
alternate allele: GTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2376_52+2377dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.208_209dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+22_1118+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+22_1856+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+22_*1736+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+22_555+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+22_1946+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+22_1946+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+22_1901+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+22_3080+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+22_264+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+22_1856+23dupTA
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+22_1856+23dupTA
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5132
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 1
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

17-37876110-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876110
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876110
    reference: chr 17
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.209A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2377A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+23A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+23A>G
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD

17-37876111-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876111
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876111
    reference: chr 17
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.210C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+24C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2378C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+24C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

17-37876114-T-TTCACTCCCCCAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876114
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876126
    reference: chr 17
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: TTCACTCCCCCAC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

17-37876120-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876120
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876120
    reference: chr 17
allele count: 7
allele frequency: 5.76881871075143e-5
allele num: 121342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.219G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+33G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2387G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+33G>T
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-37876123-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876123
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876123
    reference: chr 17
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.222C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2390C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+36C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+36C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-37876130-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37876130
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37876130
    reference: chr 17
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.52+2397C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000584684
  gene symbol: ERBB2
  hgvsc: ENST00000584684.1:n.229C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1946+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.264+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1946+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1856+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1118+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1856+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3080+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1901+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1856+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.555+43C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1736+43C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

17-37879521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879521
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879521
    reference: chr 17
allele count: 1
allele frequency: 8.341953351796856e-6
allele num: 119876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-51C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-51C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10409
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD

17-37879526-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879526
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879526
    reference: chr 17
allele count: 1
allele frequency: 8.331250520703158e-6
allele num: 120030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-46C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-46C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10434
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

17-37879542-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879542
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879542
    reference: chr 17
allele count: 1
allele frequency: 8.306889734345666e-6
allele num: 120382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-30T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-30T>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

17-37879558-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879558
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879558
    reference: chr 17
allele count: 4
allele frequency: 3.309997848501398e-5
allele num: 120846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-14G>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-14G>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

17-37879560-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879560
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879560
    reference: chr 17
allele count: 1
allele frequency: 8.269930532583527e-6
allele num: 120920
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-12T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-12T>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ

17-37879561-T-TCCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879561
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879564
    reference: chr 17
allele count: 4
allele frequency: 3.307315782510914e-5
allele num: 120944
alternate allele: TCCG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-8_3081-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-8_1947-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-8_1902-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-8_53-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-8_265-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-8_1119-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-8_1857-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-8_1857-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-8_1947-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-8_*1737-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-8_556-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-8_1857-6dupGCC
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

17-37879563-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879563
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879563
    reference: chr 17
allele count: 4
allele frequency: 3.305839765946544e-5
allele num: 120998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-9C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-9C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

17-37879564-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879564
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879564
    reference: chr 17
allele count: 7
allele frequency: 5.784167906131218e-5
allele num: 121020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-8G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-8G>A
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1947-8G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/17-37879570-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879570
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879570
    reference: chr 17
allele count: 9
allele frequency: 7.432488231893633e-5
allele num: 121090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-2A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-2A>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15876
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10914
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1947-2A>C
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

17-37879571-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879571
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879571
    reference: chr 17
allele count: 9
allele frequency: 7.429420505200594e-5
allele num: 121140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1119-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1857-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1902-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.265-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1737-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1947-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.53-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1857-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1857-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3081-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.556-1G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1947-1G>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 10924
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15891
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1947-1G>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

17-37879574-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879574
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879574
    reference: chr 17
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1949C>T
  hgvsp: ENSP00000463714.1:p.Pro650Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1859C>T
  hgvsp: ENSP00000462438.1:p.Pro620Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1739C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1859C>T
  hgvsp: ENSP00000385185.2:p.Pro620Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.558C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1904C>T
  hgvsp: ENSP00000446466.1:p.Pro635Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1121C>T
  hgvsp: ENSP00000404047.2:p.Pro374Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.267C>T
  hgvsp: ENSP00000464252.1:p.Pro90Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1859C>T
  hgvsp: ENSP00000443562.1:p.Pro620Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1949C>T
  hgvsp: ENSP00000269571.4:p.Pro650Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3083C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.55C>T
  hgvsp: ENSP00000463002.1:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro650Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum

17-37879575-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879575
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879575
    reference: chr 17
allele count: 3
allele frequency: 2.474920802534319e-5
allele num: 121216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1860T>C
  hgvsp: ENST00000584601.1:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.56T>C
  hgvsp: ENST00000580074.1:c.56T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1905T>C
  hgvsp: ENST00000541774.1:c.1905T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1122T>C
  hgvsp: ENST00000445658.2:c.1122T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1950T>C
  hgvsp: ENST00000584450.1:c.1950T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.268T>C
  hgvsp: ENST00000582818.1:c.268T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1950T>C
  hgvsp: ENST00000269571.5:c.1950T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1860T>C
  hgvsp: ENST00000540147.1:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1860T>C
  hgvsp: ENST00000406381.2:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1740T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3084T>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.559T>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro650Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

17-37879576-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879576
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879576
    reference: chr 17
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1951C>T
  hgvsp: ENST00000269571.5:c.1951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1861C>T
  hgvsp: ENST00000406381.2:c.1861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1951C>T
  hgvsp: ENST00000584450.1:c.1951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3085C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1861C>T
  hgvsp: ENST00000540147.1:c.1861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1906C>T
  hgvsp: ENST00000541774.1:c.1906C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.57C>T
  hgvsp: ENST00000580074.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1861C>T
  hgvsp: ENST00000584601.1:c.1861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1123C>T
  hgvsp: ENST00000445658.2:c.1123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.269C>T
  hgvsp: ENST00000582818.1:c.269C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1741C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.560C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6125
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu651Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

17-37879584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879584
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879584
    reference: chr 17
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.568C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.277C>T
  hgvsp: ENST00000582818.1:c.277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1869C>T
  hgvsp: ENST00000584601.1:c.1869C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1869C>T
  hgvsp: ENST00000406381.2:c.1869C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1959C>T
  hgvsp: ENST00000269571.5:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1959C>T
  hgvsp: ENST00000584450.1:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1914C>T
  hgvsp: ENST00000541774.1:c.1914C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1131C>T
  hgvsp: ENST00000445658.2:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.65C>T
  hgvsp: ENST00000580074.1:c.65C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1869C>T
  hgvsp: ENST00000540147.1:c.1869C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3093C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1749C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser653Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-37879585-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879585
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879585
    reference: chr 17
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: true
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1960A>C
  hgvsp: ENSP00000269571.4:p.Ile654Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.569A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1960A>C
  hgvsp: ENSP00000463714.1:p.Ile654Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1132A>C
  hgvsp: ENSP00000404047.2:p.Ile378Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1870A>C
  hgvsp: ENSP00000385185.2:p.Ile624Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.66A>C
  hgvsp: ENSP00000463002.1:p.Ile23Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.278A>C
  hgvsp: ENSP00000464252.1:p.Ile94Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3094A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1870A>C
  hgvsp: ENSP00000462438.1:p.Ile624Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1750A>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1915A>C
  hgvsp: ENSP00000446466.1:p.Ile639Leu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1870A>C
  hgvsp: ENSP00000443562.1:p.Ile624Leu
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15984
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile654Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

17-37879585-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879585
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879585
    reference: chr 17
allele count: 583
allele frequency: 4.805156270605302e-3
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.66A>G
  hgvsp: ENSP00000463002.1:p.Ile23Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1750A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.278A>G
  hgvsp: ENSP00000464252.1:p.Ile94Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1870A>G
  hgvsp: ENSP00000385185.2:p.Ile624Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1915A>G
  hgvsp: ENSP00000446466.1:p.Ile639Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1132A>G
  hgvsp: ENSP00000404047.2:p.Ile378Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1960A>G
  hgvsp: ENSP00000463714.1:p.Ile654Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1870A>G
  hgvsp: ENSP00000462438.1:p.Ile624Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1960A>G
  hgvsp: ENSP00000269571.4:p.Ile654Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1870A>G
  hgvsp: ENSP00000443562.1:p.Ile624Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.569A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  clinical significance: not_provided&benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3094A>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 15984
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6400
  bin: 9.75e1
  variant carriers: 429
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 9.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile654Val
num of homozygotes: 4
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

17-37879587-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879587
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879587
    reference: chr 17
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1962C>T
  hgvsp: ENST00000269571.5:c.1962C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1752C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1872C>T
  hgvsp: ENST00000406381.2:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1917C>T
  hgvsp: ENST00000541774.1:c.1917C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.571C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1962C>T
  hgvsp: ENST00000584450.1:c.1962C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1872C>T
  hgvsp: ENST00000540147.1:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1872C>T
  hgvsp: ENST00000584601.1:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.280C>T
  hgvsp: ENST00000582818.1:c.280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1134C>T
  hgvsp: ENST00000445658.2:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.68C>T
  hgvsp: ENST00000580074.1:c.68C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3096C>T
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15989
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile654Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

17-37879588-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879588
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879588
    reference: chr 17
allele count: 23826
allele frequency: 1.963573430031317e-1
allele num: 121340
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3097A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1918A>G
  hgvsp: ENSP00000446466.1:p.Ile640Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1963A>G
  hgvsp: ENSP00000463714.1:p.Ile655Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1873A>G
  hgvsp: ENSP00000462438.1:p.Ile625Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.281A>G
  hgvsp: ENSP00000464252.1:p.Ile95Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1963A>G
  hgvsp: ENSP00000269571.4:p.Ile655Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1873A>G
  hgvsp: ENSP00000385185.2:p.Ile625Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1753A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.69A>G
  hgvsp: ENSP00000463002.1:p.Ile24Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1135A>G
  hgvsp: ENSP00000404047.2:p.Ile379Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.572A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1873A>G
  hgvsp: ENSP00000443562.1:p.Ile625Val
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 9.25e1
  variant carriers: 671
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 4.25e1
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 2.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 545
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.75e1
  variant carriers: 371
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 5.25e1
  variant carriers: 362
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 8.25e1
  variant carriers: 509
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 351
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.75e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.75e1
  variant carriers: 422
genotype depth: GenotypeDepth
  all individuals: 16097
  bin: 9.75e1
  variant carriers: 16053
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 359
genotype quality: GenotypeQuality
hgvs: p.Ile655Val
num of homozygotes: 2734
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ

17-37879590-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879590
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879590
    reference: chr 17
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.283C>T
  hgvsp: ENST00000582818.1:c.283C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1920C>T
  hgvsp: ENST00000541774.1:c.1920C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1755C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1875C>T
  hgvsp: ENST00000540147.1:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1875C>T
  hgvsp: ENST00000584601.1:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3099C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1137C>T
  hgvsp: ENST00000445658.2:c.1137C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1965C>T
  hgvsp: ENST00000584450.1:c.1965C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.71C>T
  hgvsp: ENST00000580074.1:c.71C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.574C>T
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1875C>T
  hgvsp: ENST00000406381.2:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1965C>T
  hgvsp: ENST00000269571.5:c.1965C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile655Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

17-37879593-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879593
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879593
    reference: chr 17
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.286T>G
  hgvsp: ENST00000582818.1:c.286T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.74T>G
  hgvsp: ENST00000580074.1:c.74T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3102T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1140T>G
  hgvsp: ENST00000445658.2:c.1140T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1878T>G
  hgvsp: ENST00000540147.1:c.1878T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1878T>G
  hgvsp: ENST00000584601.1:c.1878T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1968T>G
  hgvsp: ENST00000269571.5:c.1968T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1923T>G
  hgvsp: ENST00000541774.1:c.1923T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1878T>G
  hgvsp: ENST00000406381.2:c.1878T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.577T>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1968T>G
  hgvsp: ENST00000584450.1:c.1968T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1758T>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser656Ser
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

17-37879606-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879606
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879606
    reference: chr 17
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.590A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1771A>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1891A>G
  hgvsp: ENSP00000462438.1:p.Ile631Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1981A>G
  hgvsp: ENSP00000463714.1:p.Ile661Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1981A>G
  hgvsp: ENSP00000269571.4:p.Ile661Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1891A>G
  hgvsp: ENSP00000385185.2:p.Ile631Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.87A>G
  hgvsp: ENSP00000463002.1:p.Ile30Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1936A>G
  hgvsp: ENSP00000446466.1:p.Ile646Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1153A>G
  hgvsp: ENSP00000404047.2:p.Ile385Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.299A>G
  hgvsp: ENSP00000464252.1:p.Ile101Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1891A>G
  hgvsp: ENSP00000443562.1:p.Ile631Val
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3115A>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile661Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

17-37879617-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879617
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879617
    reference: chr 17
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3126C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1902C>G
  hgvsp: ENST00000584601.1:c.1902C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1782C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.98C>G
  hgvsp: ENST00000580074.1:c.98C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1947C>G
  hgvsp: ENST00000541774.1:c.1947C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.1992C>G
  hgvsp: ENST00000584450.1:c.1992C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.310C>G
  hgvsp: ENST00000582818.1:c.310C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.1992C>G
  hgvsp: ENST00000269571.5:c.1992C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1902C>G
  hgvsp: ENST00000406381.2:c.1902C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1902C>G
  hgvsp: ENST00000540147.1:c.1902C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1164C>G
  hgvsp: ENST00000445658.2:c.1164C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.601C>G
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val664Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP

17-37879626-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879626
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879626
    reference: chr 17
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.2001G>A
  hgvsp: ENST00000269571.5:c.2001G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1911G>A
  hgvsp: ENST00000406381.2:c.1911G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1911G>A
  hgvsp: ENST00000540147.1:c.1911G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.319G>A
  hgvsp: ENST00000582818.1:c.319G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1956G>A
  hgvsp: ENST00000541774.1:c.1956G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1911G>A
  hgvsp: ENST00000584601.1:c.1911G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.107G>A
  hgvsp: ENST00000580074.1:c.107G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1173G>A
  hgvsp: ENST00000445658.2:c.1173G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1791G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3135G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.2001G>A
  hgvsp: ENST00000584450.1:c.2001G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.610G>A
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu667Leu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

17-37879627-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879627
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879627
    reference: chr 17
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1792G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.2002G>C
  hgvsp: ENSP00000463714.1:p.Gly668Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1912G>C
  hgvsp: ENSP00000385185.2:p.Gly638Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.611G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3136G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.108G>C
  hgvsp: ENSP00000463002.1:p.Gly37Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1912G>C
  hgvsp: ENSP00000443562.1:p.Gly638Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1174G>C
  hgvsp: ENSP00000404047.2:p.Gly392Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1957G>C
  hgvsp: ENSP00000446466.1:p.Gly653Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1912G>C
  hgvsp: ENSP00000462438.1:p.Gly638Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.2002G>C
  hgvsp: ENSP00000269571.4:p.Gly668Arg
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.320G>C
  hgvsp: ENSP00000464252.1:p.Gly108Arg
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly668Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

17-37879629-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879629
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879629
    reference: chr 17
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3138G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1176G>A
  hgvsp: ENST00000445658.2:c.1176G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1914G>A
  hgvsp: ENST00000584601.1:c.1914G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1914G>A
  hgvsp: ENST00000540147.1:c.1914G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1959G>A
  hgvsp: ENST00000541774.1:c.1959G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.613G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1914G>A
  hgvsp: ENST00000406381.2:c.1914G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.2004G>A
  hgvsp: ENST00000584450.1:c.2004G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.322G>A
  hgvsp: ENST00000582818.1:c.322G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.2004G>A
  hgvsp: ENST00000269571.5:c.2004G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1794G>A
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.110G>A
  hgvsp: ENST00000580074.1:c.110G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly668Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

17-37879629-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879629
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879629
    reference: chr 17
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1794G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.2004G>C
  hgvsp: ENST00000269571.5:c.2004G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1959G>C
  hgvsp: ENST00000541774.1:c.1959G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3138G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1914G>C
  hgvsp: ENST00000540147.1:c.1914G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1914G>C
  hgvsp: ENST00000584601.1:c.1914G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1176G>C
  hgvsp: ENST00000445658.2:c.1176G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.110G>C
  hgvsp: ENST00000580074.1:c.110G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.613G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1914G>C
  hgvsp: ENST00000406381.2:c.1914G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.2004G>C
  hgvsp: ENST00000584450.1:c.2004G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.322G>C
  hgvsp: ENST00000582818.1:c.322G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly668Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-37879660-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879660
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879660
    reference: chr 17
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1945C>G
  hgvsp: ENSP00000385185.2:p.Gln649Glu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.644C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.2035C>G
  hgvsp: ENSP00000269571.4:p.Gln679Glu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.1990C>G
  hgvsp: ENSP00000446466.1:p.Gln664Glu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.2035C>G
  hgvsp: ENSP00000463714.1:p.Gln679Glu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1945C>G
  hgvsp: ENSP00000462438.1:p.Gln649Glu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.353C>G
  hgvsp: ENSP00000464252.1:p.Gln119Glu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3169C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1945C>G
  hgvsp: ENSP00000443562.1:p.Gln649Glu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1825C>G
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.141C>G
  hgvsp: ENSP00000463002.1:p.Gln48Glu
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1207C>G
  hgvsp: ENSP00000404047.2:p.Gln403Glu
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln679Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

17-37879673-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 37879673
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 37879673
    reference: chr 17
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463427
  ensembl transcript: ENST00000578373
  gene symbol: ERBB2
  hgvsc: ENST00000578373.1:c.*1838G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000462438
  ensembl transcript: ENST00000584601
  gene symbol: ERBB2
  hgvsc: ENST00000584601.1:c.1958G>C
  hgvsp: ENSP00000462438.1:p.Arg653Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000446466
  ensembl transcript: ENST00000541774
  gene symbol: ERBB2
  hgvsc: ENST00000541774.1:c.2003G>C
  hgvsp: ENSP00000446466.1:p.Arg668Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463002
  ensembl transcript: ENST00000580074
  gene symbol: ERBB2
  hgvsc: ENST00000580074.1:c.154G>C
  hgvsp: ENSP00000463002.1:p.Arg52Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000269571
  ensembl transcript: ENST00000269571
  gene symbol: ERBB2
  hgvsc: ENST00000269571.5:c.2048G>C
  hgvsp: ENSP00000269571.4:p.Arg683Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000463714
  ensembl transcript: ENST00000584450
  gene symbol: ERBB2
  hgvsc: ENST00000584450.1:c.2048G>C
  hgvsp: ENSP00000463714.1:p.Arg683Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000464252
  ensembl transcript: ENST00000582818
  gene symbol: ERBB2
  hgvsc: ENST00000582818.1:c.366G>C
  hgvsp: ENSP00000464252.1:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000443562
  ensembl transcript: ENST00000540147
  gene symbol: ERBB2
  hgvsc: ENST00000540147.1:c.1958G>C
  hgvsp: ENSP00000443562.1:p.Arg653Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000578630
  gene symbol: ERBB2
  hgvsc: ENST00000578630.1:n.657G>C
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000385185
  ensembl transcript: ENST00000406381
  gene symbol: ERBB2
  hgvsc: ENST00000406381.2:c.1958G>C
  hgvsp: ENSP00000385185.2:p.Arg653Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141736
  ensembl protein: ENSP00000404047
  ensembl transcript: ENST00000445658
  gene symbol: ERBB2
  hgvsc: ENST00000445658.2:c.1220G>C
  hgvsp: ENSP00000404047.2:p.Arg407Pro
  variant of: http://identifiers.org/hgnc/3430
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141736
  ensembl transcript: ENST00000583038
  gene symbol: ERBB2
  hgvsc: ENST00000583038.1:n.3182G>C
  variant of: http://identifiers.org/hgnc/3430
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg683Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G

GenotypeDepth
all individuals: 965
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1677
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8677
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 207
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8819
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34915
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.890120967741935e-4
allele num: 15872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.127e1

DP
type: SiteQuality
SIO_000300: 1.559184e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

GenotypeDepth
all individuals: 8646
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 37
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 512
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2804
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1034
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 89
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 27
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34370
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2402
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1845
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8751
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3458
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.046087300862043e-5
allele num: 65658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.534211860111505e-4
allele num: 15784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.971405877680699e-4
allele num: 10072
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.182e1

DP
type: SiteQuality
SIO_000300: 1.553632e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

FS
type: SiteQuality
SIO_000300: 3.965e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeDepth
all individuals: 511
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27412
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1245
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34464
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3755
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8754
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.046736944732192e-5
allele num: 65644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.011e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.939e-1

DP
type: SiteQuality
SIO_000300: 1.553136e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.836e0

FS
type: SiteQuality
SIO_000300: 6.832e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.62e-1

QD
type: SiteQuality
SIO_000300: 2.55e0

GenotypeDepth
all individuals: 2803
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1050
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3317
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8526
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1244
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3429
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3737
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8616
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32422
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.328288707799767e-4
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15534
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

FS
type: SiteQuality
SIO_000300: 4.967e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.637e0

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

DP
type: SiteQuality
SIO_000300: 1.52783e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 6.59e-1

QD
type: SiteQuality
SIO_000300: 1.098e1

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2302
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14459
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1242
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8421
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3892
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1033
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3719
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8489
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3393
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.045408058907752e-4
allele num: 9778
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.28e-1

FS
type: SiteQuality
SIO_000300: 2.181e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.074e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

DP
type: SiteQuality
SIO_000300: 1.500026e6

MQRankSum
type: SiteQuality
SIO_000300: 9.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

QD
type: SiteQuality
SIO_000300: 1.321e1

GenotypeDepth
all individuals: 513
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 360
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24197
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29467
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3717
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3923
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 293
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.546216286986122e-5
allele num: 15276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.495388e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.518e0

VQSLOD
type: SiteQuality
SIO_000300: -1.24e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.06e-1

QD
type: SiteQuality
SIO_000300: 1.731e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 23
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1602
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8350
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 513
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3716
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3903
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1244
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.575486586007364e-5
allele num: 15208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.237e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

VQSLOD
type: SiteQuality
SIO_000300: -1.677e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.655e1

DP
type: SiteQuality
SIO_000300: 1.490599e6

GenotypeDepth
all individuals: 1232
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 13881
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3810
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 511
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 384
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7649
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.354603249352484e-4
allele num: 8494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.093e1

VQSLOD
type: SiteQuality
SIO_000300: 5.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.084e0

FS
type: SiteQuality
SIO_000300: 3.318e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

DP
type: SiteQuality
SIO_000300: 1.472301e6

GenotypeDepth
all individuals: 4227
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1348
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3493
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2413
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 3.729304e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 6202
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2086
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1667
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48566
bin: 9.75e1
variant carriers: 6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.995502248875562e-5
allele num: 66700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.98e0

VQSLOD
type: SiteQuality
SIO_000300: 7.64e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

DP
type: SiteQuality
SIO_000300: 3.730291e6

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

GenotypeDepth
all individuals: 5892
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2432
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2086
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48566
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.730473e6

FS
type: SiteQuality
SIO_000300: 3.302e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

QD
type: SiteQuality
SIO_000300: 1.2e1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

GenotypeDepth
all individuals: 6202
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1767
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6285
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48563
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1754
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.934e1

VQSLOD
type: SiteQuality
SIO_000300: 7.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

DP
type: SiteQuality
SIO_000300: 3.730913e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.72e0

QD
type: SiteQuality
SIO_000300: 1.39e1

GenotypeDepth
all individuals: 1348
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2431
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48563
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2807
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.087999999999999e0

DP
type: SiteQuality
SIO_000300: 3.731859e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.873e0

QD
type: SiteQuality
SIO_000300: 1.661e1

MQ
type: SiteQuality
SIO_000300: 5.877e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

GenotypeDepth
all individuals: 5893
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3353
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3495
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2812
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2086
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48563
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.158e0

DP
type: SiteQuality
SIO_000300: 3.731876e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.403e1

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.46e-1

GenotypeDepth
all individuals: 5892
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4924
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6285
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48562
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1698
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.205e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.83e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 1.972e0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 3.73195e6

QD
type: SiteQuality
SIO_000300: 1.335e1

GenotypeDepth
all individuals: 6285
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3353
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2084
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48563
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1614
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.383e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 3.731964e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.610000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeDepth
all individuals: 5893
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4070
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2430
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1767
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3492
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48560
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.249e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.089e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.15e-1

DP
type: SiteQuality
SIO_000300: 3.731778e6

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

FS
type: SiteQuality
SIO_000300: 3.575e0

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

GenotypeDepth
all individuals: 3353
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5893
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4070
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4965
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6199
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2839
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48560
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1697
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.04e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.653e1

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.95e0

DP
type: SiteQuality
SIO_000300: 3.731772e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

GenotypeDepth
all individuals: 3342
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4951
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4238
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4959
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 966
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2084
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48561
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

DP
type: SiteQuality
SIO_000300: 3.734066e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.4e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.226e1

FS
type: SiteQuality
SIO_000300: 5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

GenotypeDepth
all individuals: 5892
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3342
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6287
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 4068
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2503
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48561
bin: 9.75e1
variant carriers: 69

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2084
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 61
allele frequency: 9.142137761525089e-4
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.318535152876144e-4
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

FS
type: SiteQuality
SIO_000300: 5.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

DP
type: SiteQuality
SIO_000300: 3.734066e6

GenotypeDepth
all individuals: 4251
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5901
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4903
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6289
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3494
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1754
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48543
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.72e-1

DP
type: SiteQuality
SIO_000300: 3.729248e6

FS
type: SiteQuality
SIO_000300: 5.095e0

QD
type: SiteQuality
SIO_000300: 1.34e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.225e0

MQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeDepth
all individuals: 3491
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4067
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6288
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1759
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5128
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48544
bin: 9.75e1
variant carriers: 52

GenotypeQuality
all individuals: 1754
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.94838284224094e-4
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 38
allele frequency: 3.28208671618587e-3
allele num: 11578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

DP
type: SiteQuality
SIO_000300: 3.730984e6

FS
type: SiteQuality
SIO_000300: 1.869e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
SIO_000300: 1.163e1

GenotypeDepth
all individuals: 6210
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5137
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5906
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6291
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2844
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48527
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

DP
type: SiteQuality
SIO_000300: 3.727416e6

MQRankSum
type: SiteQuality
SIO_000300: -1.669e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.205e0

VQSLOD
type: SiteQuality
SIO_000300: -3.372e-1

QD
type: SiteQuality
SIO_000300: 9.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 5906
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1342
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6291
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2421
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1760
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48527
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.16e-1

DP
type: SiteQuality
SIO_000300: 3.727247e6

FS
type: SiteQuality
SIO_000300: 1.174e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

QD
type: SiteQuality
SIO_000300: 1.185e1

GenotypeDepth
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3340
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2421
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4889
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6210
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48527
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.97e-1

QD
type: SiteQuality
SIO_000300: 1.185e1

FS
type: SiteQuality
SIO_000300: 1.174e0

DP
type: SiteQuality
SIO_000300: 3.727247e6

MQRankSum
type: SiteQuality
SIO_000300: 8.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

GenotypeDepth
all individuals: 6210
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2498
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5137
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4962
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2819
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48526
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.863e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 3.727037e6

MQ
type: SiteQuality
SIO_000300: 5.985e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 4.747e0

QD
type: SiteQuality
SIO_000300: 1.446e1

MQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.627e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.935e0

GenotypeDepth
all individuals: 1343
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2421
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2450
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48531
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2768
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.084302325581395e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

DP
type: SiteQuality
SIO_000300: 3.726482e6

QD
type: SiteQuality
SIO_000300: 1.224e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

GenotypeDepth
all individuals: 1759
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 6208
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5906
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2755
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48524
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.056201550387597e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.448e1

FS
type: SiteQuality
SIO_000300: 1.508e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.9e0

MQ
type: SiteQuality
SIO_000300: 6.036e1

DP
type: SiteQuality
SIO_000300: 3.725651e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

GenotypeDepth
all individuals: 4257
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4068
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6295
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48522
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.725169e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.032e0

VQSLOD
type: SiteQuality
SIO_000300: -8.385e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.825e0

FS
type: SiteQuality
SIO_000300: 4.205e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 1.37e1

GenotypeDepth
all individuals: 4883
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1758
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5909
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48523
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 971
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.279e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 3.724925e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.513e0

FS
type: SiteQuality
SIO_000300: 3.221e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeDepth
all individuals: 2421
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5140
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1758
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48523
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.279e1

DP
type: SiteQuality
SIO_000300: 3.724925e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e0

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 3.221e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.513e0

GenotypeDepth
all individuals: 6297
bin: 5.75e1
variant carriers: 9

GenotypeDepth
all individuals: 2422
bin: 8.25e1
variant carriers: 5

GenotypeDepth
all individuals: 4885
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1589
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48587
bin: 9.75e1
variant carriers: 123

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 123
allele frequency: 1.844133257369037e-3
allele num: 66698
num of homozygotes: 1

FS
type: SiteQuality
SIO_000300: 1.499e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

DP
type: SiteQuality
SIO_000300: 3.725301e6

MQ
type: SiteQuality
SIO_000300: 6.02e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.41e-1

QD
type: SiteQuality
SIO_000300: 1.798e1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

GenotypeDepth
all individuals: 3493
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4964
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5147
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48529
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e0

FS
type: SiteQuality
SIO_000300: 2.931e0

VQSLOD
type: SiteQuality
SIO_000300: -4.033e0

MQRankSum
type: SiteQuality
SIO_000300: -4.089e0

DP
type: SiteQuality
SIO_000300: 3.721716e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.116e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.009e0

MQ
type: SiteQuality
SIO_000300: 5.315e1

QD
type: SiteQuality
SIO_000300: 1.517e1

GenotypeDepth
all individuals: 2338
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2420
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6294
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48524
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.179999999999999e-1

DP
type: SiteQuality
SIO_000300: 3.720341e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.72e-1

QD
type: SiteQuality
SIO_000300: 1.745e1

GenotypeQuality
all individuals: 1585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48520
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

QD
type: SiteQuality
SIO_000300: 3.97e0

VQSLOD
type: SiteQuality
SIO_000300: 7.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.281e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

DP
type: SiteQuality
SIO_000300: 3.719492e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.99e-1

GenotypeDepth
all individuals: 6209
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1756
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4863
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48521
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2084
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049664107485605e-4
allele num: 66688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.11e0

DP
type: SiteQuality
SIO_000300: 3.718323e6

MQRankSum
type: SiteQuality
SIO_000300: -1.29e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.071e0

GenotypeDepth
all individuals: 2419
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1756
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4064
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48517
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2080
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.964e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.85e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.491e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: 2.83e-1

DP
type: SiteQuality
SIO_000300: 3.716904e6

QD
type: SiteQuality
SIO_000300: 1.406e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

GenotypeDepth
all individuals: 4065
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4960
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5901
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48512
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.713831e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.884e0

FS
type: SiteQuality
SIO_000300: 1.47e0

VQSLOD
type: SiteQuality
SIO_000300: 3.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.581e0

QD
type: SiteQuality
SIO_000300: 9.449999999999999e0

GenotypeDepth
all individuals: 4585
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21547
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 153
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2652
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18938
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6656
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1857
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50993537476596e-5
allele num: 66228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

DP
type: SiteQuality
SIO_000300: 2.814309e6

VQSLOD
type: SiteQuality
SIO_000300: -1.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.81e-1

QD
type: SiteQuality
SIO_000300: 1.959e1

GenotypeDepth
all individuals: 1515
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19511
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1847
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21535
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509160604871571e-5
allele num: 66262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.411e0

DP
type: SiteQuality
SIO_000300: 2.816462e6

FS
type: SiteQuality
SIO_000300: 1.409e0

MQ
type: SiteQuality
SIO_000300: 5.871e1

VQSLOD
type: SiteQuality
SIO_000300: 4.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

MQRankSum
type: SiteQuality
SIO_000300: 8.98e-1

GenotypeDepth
all individuals: 1147
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1894
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6887
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21551
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 290
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2775
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506614035616356e-5
allele num: 66374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

VQSLOD
type: SiteQuality
SIO_000300: -2.191e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 5.14e0

FS
type: SiteQuality
SIO_000300: 9.379999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.833857e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.52e-1

GenotypeDepth
all individuals: 1148
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7074
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21569
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.854828737479906e-4
allele num: 16174
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.001e1

FS
type: SiteQuality
SIO_000300: 7.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

DP
type: SiteQuality
SIO_000300: 2.849981e6

VQSLOD
type: SiteQuality
SIO_000300: 3.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.02e-1

GenotypeDepth
all individuals: 10806
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21568
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7106
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1990
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.624e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.081e0

DP
type: SiteQuality
SIO_000300: 2.851536e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.154e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.002e1

FS
type: SiteQuality
SIO_000300: 7.48e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeDepth
all individuals: 1147
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21567
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 21893
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.463054187192118e-4
allele num: 16240
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.85207e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.363e0

VQSLOD
type: SiteQuality
SIO_000300: 8.29e-1

QD
type: SiteQuality
SIO_000300: 2.206e1

FS
type: SiteQuality
SIO_000300: 1.423e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.63e-1

MQ
type: SiteQuality
SIO_000300: 5.85e1

GenotypeDepth
all individuals: 1380
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2448
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21864
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21568
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 7098
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.228652168571078e-4
allele num: 16278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.096e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

DP
type: SiteQuality
SIO_000300: 2.853435e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.496e0

QD
type: SiteQuality
SIO_000300: 2.5e1

GenotypeDepth
all individuals: 6129
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 1417
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1456
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4219
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7119
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21568
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21927
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2890
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.00817111271329e-5
allele num: 66576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 1.934e0

MQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

DP
type: SiteQuality
SIO_000300: 2.854845e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.77e-1

QD
type: SiteQuality
SIO_000300: 8.380000000000001e0

GenotypeDepth
all individuals: 6126
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 154
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2008
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21575
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2919
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22037
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7163
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2476
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.013881377321075e-5
allele num: 66564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.886280546469117e-4
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.593e0

DP
type: SiteQuality
SIO_000300: 2.858241e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -7.969e1

MQRankSum
type: SiteQuality
SIO_000300: -7.98e-1

FS
type: SiteQuality
SIO_000300: 1.26878e2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.727e0

MQ
type: SiteQuality
SIO_000300: 5.433e1

GenotypeDepth
all individuals: 1457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21581
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.008738476322033e-5
allele num: 66602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.884615384615385e-4
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.857959e6

VQSLOD
type: SiteQuality
SIO_000300: -5.364e1

QD
type: SiteQuality
SIO_000300: 3.31e0

MQ
type: SiteQuality
SIO_000300: 5.433e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.0405e2

MQRankSum
type: SiteQuality
SIO_000300: -4.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.797e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.786e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6125
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1447
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1658
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1520
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6983
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22061
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2016
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21582
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 888
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.858932e6

VQSLOD
type: SiteQuality
SIO_000300: -3.211e0

MQRankSum
type: SiteQuality
SIO_000300: -1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.047e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

QD
type: SiteQuality
SIO_000300: 2.642e1

FS
type: SiteQuality
SIO_000300: 2.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.021e0

GenotypeDepth
all individuals: 1070
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4222
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1657
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7194
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21580
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2931
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501665616278023e-5
allele num: 66642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.444e1

FS
type: SiteQuality
SIO_000300: 7.7196e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.051e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.439e0

MQRankSum
type: SiteQuality
SIO_000300: -2.309e0

VQSLOD
type: SiteQuality
SIO_000300: -3.703e1

QD
type: SiteQuality
SIO_000300: 4.86e0

DP
type: SiteQuality
SIO_000300: 2.859041e6

GenotypeDepth
all individuals: 1382
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1659
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1147
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21581
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22100
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2021
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7197
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQRankSum
type: SiteQuality
SIO_000300: -1.26e0

MQ
type: SiteQuality
SIO_000300: 5.846e1

DP
type: SiteQuality
SIO_000300: 2.859331e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.288e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.6508e1

VQSLOD
type: SiteQuality
SIO_000300: -1.883e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.574e0

GenotypeDepth
all individuals: 2350
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1506
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1661
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21585
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7222
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.535e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.172e1

FS
type: SiteQuality
SIO_000300: 4.251e0

DP
type: SiteQuality
SIO_000300: 2.861244e6

MQRankSum
type: SiteQuality
SIO_000300: -3.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.902e0

GenotypeDepth
all individuals: 4212
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6400
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1430
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1058
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1489
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10982
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7219
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2025
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21647
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

QD
type: SiteQuality
SIO_000300: 1.596e1

DP
type: SiteQuality
SIO_000300: 2.893464e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.81e0

GenotypeDepth
all individuals: 1137
bin: 8.75e1
variant carriers: 23

GenotypeDepth
all individuals: 10982
bin: 3.25e1
variant carriers: 3

GenotypeDepth
all individuals: 1430
bin: 5.25e1
variant carriers: 5

GenotypeDepth
all individuals: 1368
bin: 7.25e1
variant carriers: 20

GenotypeDepth
all individuals: 4212
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 1489
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21647
bin: 9.75e1
variant carriers: 579

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7219
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2025
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 37
allele frequency: 2.245690701626608e-3
allele num: 16476
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 2.691272587466359e-3
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 23
allele frequency: 1.986526170323026e-3
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.058361052313275e-3
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 488
allele frequency: 7.317000029987705e-3
allele num: 66694
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.893464e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 1.596e1

VQSLOD
type: SiteQuality
SIO_000300: 4.81e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeDepth
all individuals: 1642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1367
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1483
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21639
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2494
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2939
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22138
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 6.543e0

QD
type: SiteQuality
SIO_000300: 1.27e1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.635e0

DP
type: SiteQuality
SIO_000300: 2.893235e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 10608
bin: 3.25e1
variant carriers: 137

GenotypeDepth
all individuals: 15426
bin: 2.75e1
variant carriers: 67

GenotypeDepth
all individuals: 484
bin: 7.25e1
variant carriers: 399

GenotypeQuality
all individuals: 21054
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 6851
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1789
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2303
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2676
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 24112
bin: 9.75e1
variant carriers: 21060

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1033
bin: 9.25e1
variant carriers: 6

European (Finnish)
type: Population
allele count: 1912
allele frequency: 2.892586989409985e-1
allele num: 6610
num of homozygotes: 294

Latino
type: Population
allele count: 1690
allele frequency: 1.460169345083809e-1
allele num: 11574
num of homozygotes: 125

East Asian
type: Population
allele count: 1088
allele frequency: 1.258385380522785e-1
allele num: 8646
num of homozygotes: 70

African
type: Population
allele count: 423
allele frequency: 4.066525668140742e-2
allele num: 10402
num of homozygotes: 11

Other
type: Population
allele count: 171
allele frequency: 1.883259911894273e-1
allele num: 908
num of homozygotes: 13

European (Non-Finnish)
type: Population
allele count: 15984
allele frequency: 2.39597073989687e-1
allele num: 66712
num of homozygotes: 1988

South Asian
type: Population
allele count: 2558
allele frequency: 1.551431344007763e-1
allele num: 16488
num of homozygotes: 233

BaseQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.63e-2

QD
type: SiteQuality
SIO_000300: 1.487e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.57e0

DP
type: SiteQuality
SIO_000300: 4.059922e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeDepth
all individuals: 84
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16498
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10486
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5533
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3645
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30659
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.885e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.467e0

FS
type: SiteQuality
SIO_000300: 1.853e0

VQSLOD
type: SiteQuality
SIO_000300: -3.962e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.921709e6

QD
type: SiteQuality
SIO_000300: 1.057e1

GenotypeDepth
all individuals: 1638
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10494
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4290
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30678
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5534
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.85e-1

MQ
type: SiteQuality
SIO_000300: 5.91e1

QD
type: SiteQuality
SIO_000300: 1.383e1

FS
type: SiteQuality
SIO_000300: 1.694e0

DP
type: SiteQuality
SIO_000300: 1.921904e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.825e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.03e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.65e-1

GenotypeDepth
all individuals: 16499
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 112
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30721
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5528
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.922292e6

VQSLOD
type: SiteQuality
SIO_000300: -9.527e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

MQ
type: SiteQuality
SIO_000300: 5.872e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

GenotypeDepth
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6506
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30745
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1768
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5523
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3645
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.48e-1

QD
type: SiteQuality
SIO_000300: 2.721e1

VQSLOD
type: SiteQuality
SIO_000300: -2.569e0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.747e0

MQ
type: SiteQuality
SIO_000300: 5.993e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.664e0

DP
type: SiteQuality
SIO_000300: 1.922372e6

GenotypeDepth
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3647
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5521
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1768
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.246e0

MQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.106e0

DP
type: SiteQuality
SIO_000300: 1.922011e6

VQSLOD
type: SiteQuality
SIO_000300: 5.03e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

QD
type: SiteQuality
SIO_000300: 1.565e1

GenotypeDepth
all individuals: 303
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 865
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1768
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10498
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3647
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.453e0

FS
type: SiteQuality
SIO_000300: 1.2647e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.341e0

DP
type: SiteQuality
SIO_000300: 1.921943e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

QD
type: SiteQuality
SIO_000300: 1.056e1

VQSLOD
type: SiteQuality
SIO_000300: -2.176e0

MQ
type: SiteQuality
SIO_000300: 5.846e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.594e0

GenotypeDepth
all individuals: 865
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16500
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10498
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5517
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.708e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

DP
type: SiteQuality
SIO_000300: 1.921824e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.23e-1

FS
type: SiteQuality
SIO_000300: 4.279e0

QD
type: SiteQuality
SIO_000300: 1.206e1

GenotypeDepth
all individuals: 152
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10498
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5517
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.708e0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

QD
type: SiteQuality
SIO_000300: 1.206e1

FS
type: SiteQuality
SIO_000300: 4.279e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 1.921824e6

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 71
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 152
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6498
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5507
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1273
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30779
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2916
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4278
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997871511227029e-5
allele num: 66714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

VQSLOD
type: SiteQuality
SIO_000300: -1.33e0

FS
type: SiteQuality
SIO_000300: 4.859e0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e0

DP
type: SiteQuality
SIO_000300: 1.920827e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.543e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

GenotypeDepth
all individuals: 1634
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 152
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 481
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10476
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30754
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5503
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0