19-58099895-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099895
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099895
    reference: chr 19
allele count: 3
allele frequency: 2.687160745955823e-5
allele num: 111642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-54C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.34-12C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.16-12C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1484C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.486-12C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.16-12C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.73-12C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-93-12C>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2865
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

19-58099897-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099897
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099897
    reference: chr 19
allele count: 1
allele frequency: 8.949506882170792e-6
allele num: 111738
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.73-10A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1482A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.16-10A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.34-10A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.486-10A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-52A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-93-10A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.16-10A>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2901
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-58099904-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099904
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099902
    reference: chr 19
allele count: 1
allele frequency: 8.935751943526047e-6
allele num: 111910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.34-2_34-1delAG
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-93-2_-93-1delAG
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.16-2_16-1delAG
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.16-2_16-1delAG
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.73-2_73-1delAG
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-44_34-43delAG
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1474_34-1473delAG
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.486-2_486-1delAG
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
hgvs: c.73-2_73-1delAG
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: CAG
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

19-58099907-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099907
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099907
    reference: chr 19
allele count: 1
allele frequency: 8.918538073239034e-6
allele num: 112126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.16G>T
  hgvsp: ENSP00000472088.1:p.Gly6Cys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-93G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.34G>T
  hgvsp: ENSP00000438487.1:p.Gly12Cys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-42G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1472G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.16G>T
  hgvsp: ENSP00000470019.1:p.Gly6Cys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.73G>T
  hgvsp: ENSP00000472867.1:p.Gly25Cys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.486G>T
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4957
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly25Cys
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ

19-58099910-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099910
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099910
    reference: chr 19
allele count: 1
allele frequency: 8.902341315766046e-6
allele num: 112330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.37T>C
  hgvsp: ENSP00000438487.1:p.Cys13Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-90T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.19T>C
  hgvsp: ENSP00000470019.1:p.Cys7Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.489T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.76T>C
  hgvsp: ENSP00000472867.1:p.Cys26Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.19T>C
  hgvsp: ENSP00000472088.1:p.Cys7Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-39T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1469T>C
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys26Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

19-58099927-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099927
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099927
    reference: chr 19
allele count: 1
allele frequency: 8.789199831247363e-6
allele num: 113776
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.36C>T
  hgvsp: ENST00000597219.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.93C>T
  hgvsp: ENST00000597850.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-22C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.54C>T
  hgvsp: ENST00000536878.2:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1452C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.36C>T
  hgvsp: ENST00000600053.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.506C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-73C>T
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp31Asp
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-58099928-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099928
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099928
    reference: chr 19
allele count: 5
allele frequency: 4.385503280356454e-5
allele num: 114012
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.37A>G
  hgvsp: ENSP00000470019.1:p.Ile13Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-21A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-72A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.507A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.37A>G
  hgvsp: ENSP00000472088.1:p.Ile13Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1451A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.55A>G
  hgvsp: ENSP00000438487.1:p.Ile19Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.94A>G
  hgvsp: ENSP00000472867.1:p.Ile32Val
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile32Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

19-58099930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099930
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099930
    reference: chr 19
allele count: 1
allele frequency: 8.751816001820377e-6
allele num: 114262
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.96C>T
  hgvsp: ENST00000597850.1:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1449C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-19C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.39C>T
  hgvsp: ENST00000600053.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.57C>T
  hgvsp: ENST00000536878.2:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.39C>T
  hgvsp: ENST00000597219.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.509C>T
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3323
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile32Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP

19-58099931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099931
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099931
    reference: chr 19
allele count: 2
allele frequency: 1.746267353531826e-5
allele num: 114530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.510G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.40G>A
  hgvsp: ENSP00000472088.1:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.97G>A
  hgvsp: ENSP00000472867.1:p.Ala33Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-69G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.58G>A
  hgvsp: ENSP00000438487.1:p.Ala20Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.40G>A
  hgvsp: ENSP00000470019.1:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-18G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1448G>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4949
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala33Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum

19-58099937-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099937
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099937
    reference: chr 19
allele count: 5
allele frequency: 4.327505625757313e-5
allele num: 115540
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.34-12T>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.516T>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.46T>G
  hgvsp: ENSP00000470019.1:p.Tyr16Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-63T>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.46T>G
  hgvsp: ENSP00000472088.1:p.Tyr16Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.103T>G
  hgvsp: ENSP00000472867.1:p.Tyr35Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.64T>G
  hgvsp: ENSP00000438487.1:p.Tyr22Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1442T>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4949
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Tyr35Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

19-58099950-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099950
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099950
    reference: chr 19
allele count: 1
allele frequency: 8.541752084187508e-6
allele num: 117072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.59A>T
  hgvsp: ENSP00000472088.1:p.Asp20Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.116A>T
  hgvsp: ENSP00000472867.1:p.Asp39Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.59A>T
  hgvsp: ENSP00000470019.1:p.Asp20Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.35A>T
  hgvsp: ENSP00000469971.1:p.Asp12Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.77A>T
  hgvsp: ENSP00000438487.1:p.Asp26Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-50A>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.529A>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1429A>T
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46283
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp39Val
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

19-58099951-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099951
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099951
    reference: chr 19
allele count: 6
allele frequency: 5.121988697478274e-5
allele num: 117142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.530C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.78C>T
  hgvsp: ENST00000536878.2:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.117C>T
  hgvsp: ENST00000597850.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.60C>T
  hgvsp: ENST00000600053.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.60C>T
  hgvsp: ENST00000597219.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-49C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1428C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.36C>T
  hgvsp: ENST00000598689.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
hgvs: c.36C>T
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-58099952-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099952
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099952
    reference: chr 19
allele count: 4
allele frequency: 3.407445267910384e-5
allele num: 117390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.531G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.37G>A
  hgvsp: ENSP00000469971.1:p.Glu13Lys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.79G>A
  hgvsp: ENSP00000438487.1:p.Glu27Lys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1427G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.61G>A
  hgvsp: ENSP00000470019.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.61G>A
  hgvsp: ENSP00000472088.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.118G>A
  hgvsp: ENSP00000472867.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-48G>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu40Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-58099965-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099965
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099965
    reference: chr 19
allele count: 2
allele frequency: 1.692534231504832e-5
allele num: 118166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.92T>C
  hgvsp: ENSP00000438487.1:p.Leu31Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.74T>C
  hgvsp: ENSP00000472088.1:p.Leu25Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-35T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1414T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.131T>C
  hgvsp: ENSP00000472867.1:p.Leu44Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.74T>C
  hgvsp: ENSP00000470019.1:p.Leu25Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.544T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.50T>C
  hgvsp: ENSP00000469971.1:p.Leu17Pro
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4938
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu44Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

19-58099974-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099974
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099974
    reference: chr 19
allele count: 2
allele frequency: 1.690788583795482e-5
allele num: 118288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1405C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.83C>T
  hgvsp: ENSP00000470019.1:p.Ala28Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.59C>T
  hgvsp: ENSP00000469971.1:p.Ala20Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.101C>T
  hgvsp: ENSP00000438487.1:p.Ala34Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.140C>T
  hgvsp: ENSP00000472867.1:p.Ala47Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.83C>T
  hgvsp: ENSP00000472088.1:p.Ala28Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.553C>T
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala47Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

19-58099976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099976
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099976
    reference: chr 19
allele count: 7
allele frequency: 5.917559936428499e-5
allele num: 118292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.555C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.61C>T
  hgvsp: ENSP00000469971.1:p.Gln21Ter
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.85C>T
  hgvsp: ENSP00000472088.1:p.Gln29Ter
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1403C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.85C>T
  hgvsp: ENSP00000470019.1:p.Gln29Ter
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.142C>T
  hgvsp: ENSP00000472867.1:p.Gln48Ter
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.103C>T
  hgvsp: ENSP00000438487.1:p.Gln35Ter
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln48Ter
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

19-58099978-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58099978
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58099978
    reference: chr 19
allele count: 1
allele frequency: 8.454943605526151e-6
allele num: 118274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.105G>A
  hgvsp: ENST00000536878.2:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.87G>A
  hgvsp: ENST00000600053.1:c.87G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171649
  ensembl transcript: ENST00000598726
  gene symbol: ZIK1
  hgvsc: ENST00000598726.1:n.557G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.144G>A
  hgvsp: ENST00000597850.1:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.63G>A
  hgvsp: ENST00000598689.1:c.63G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1401G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000470019
  ensembl transcript: ENST00000597219
  gene symbol: ZIK1
  hgvsc: ENST00000597219.1:c.87G>A
  hgvsp: ENST00000597219.1:c.87G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3979
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln48Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

19-58100003-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100003
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100003
    reference: chr 19
allele count: 1
allele frequency: 8.548469823901522e-6
allele num: 116980
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.169C>G
  hgvsp: ENSP00000472867.1:p.Leu57Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.112C>G
  hgvsp: ENSP00000472088.1:p.Leu38Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.130C>G
  hgvsp: ENSP00000438487.1:p.Leu44Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1376C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.4C>G
  hgvsp: ENSP00000468937.1:p.Leu2Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.88C>G
  hgvsp: ENSP00000469971.1:p.Leu30Val
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3027
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu57Val
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

19-58100013-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100013
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100013
    reference: chr 19
allele count: 1
allele frequency: 8.604371020478403e-6
allele num: 116220
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.179T>C
  hgvsp: ENSP00000472867.1:p.Phe60Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.122T>C
  hgvsp: ENSP00000472088.1:p.Phe41Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.98T>C
  hgvsp: ENSP00000469971.1:p.Phe33Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.14T>C
  hgvsp: ENSP00000468937.1:p.Phe5Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.140T>C
  hgvsp: ENSP00000438487.1:p.Phe47Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1366T>C
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe60Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/19-58100016-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100016
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100016
    reference: chr 19
allele count: 4
allele frequency: 3.45435075477564e-5
allele num: 115796
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.17C>A
  hgvsp: ENSP00000468937.1:p.Ala6Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.182C>A
  hgvsp: ENSP00000472867.1:p.Ala61Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.143C>A
  hgvsp: ENSP00000438487.1:p.Ala48Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.125C>A
  hgvsp: ENSP00000472088.1:p.Ala42Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.101C>A
  hgvsp: ENSP00000469971.1:p.Ala34Asp
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1363C>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala61Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD

19-58100019-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100019
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100019
    reference: chr 19
allele count: 17
allele frequency: 1.470868158300023e-4
allele num: 115578
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.128T>C
  hgvsp: ENSP00000472088.1:p.Leu43Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.146T>C
  hgvsp: ENSP00000438487.1:p.Leu49Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1360T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.20T>C
  hgvsp: ENSP00000468937.1:p.Leu7Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.104T>C
  hgvsp: ENSP00000469971.1:p.Leu35Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.185T>C
  hgvsp: ENSP00000472867.1:p.Leu62Pro
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu62Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-58100020-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100020
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100020
    reference: chr 19
allele count: 18
allele frequency: 1.558819454066787e-4
allele num: 115472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.105T>C
  hgvsp: ENST00000598689.1:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.147T>C
  hgvsp: ENST00000536878.2:c.147T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1359T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.129T>C
  hgvsp: ENST00000600053.1:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.186T>C
  hgvsp: ENST00000597850.1:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.21T>C
  hgvsp: ENST00000599456.1:c.21T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu62Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-58100029-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100029
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100029
    reference: chr 19
allele count: 1
allele frequency: 8.732556717955883e-6
allele num: 114514
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.114A>C
  hgvsp: ENST00000598689.1:c.114A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.30A>C
  hgvsp: ENST00000599456.1:c.30A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.195A>C
  hgvsp: ENST00000597850.1:c.195A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.138A>C
  hgvsp: ENST00000600053.1:c.138A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1350A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.156A>C
  hgvsp: ENST00000536878.2:c.156A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46271
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser65Ser
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/19-58100044-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100044
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100044
    reference: chr 19
allele count: 1
allele frequency: 8.836732529779788e-6
allele num: 113164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.160+11A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.34+11A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.118+11A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.199+11A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.142+11A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1335A>C
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46264
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2967
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-58100051-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100051
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100051
    reference: chr 19
allele count: 1
allele frequency: 8.868393047179851e-6
allele num: 112760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.142+18A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.160+18A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.118+18A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.34+18A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.199+18A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1328A>C
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2639
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-58100058-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100058
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100058
    reference: chr 19
allele count: 1
allele frequency: 8.914880718895982e-6
allele num: 112172
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.199+25T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1321T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.160+25T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.142+25T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.34+25T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.118+25T>C
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1976
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

19-58100062-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100062
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100062
    reference: chr 19
allele count: 1
allele frequency: 8.922198429693077e-6
allele num: 112080
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.160+29C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.142+29C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.118+29C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1317C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.34+29C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.199+29C>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

19-58100066-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100066
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100066
    reference: chr 19
allele count: 1
allele frequency: 8.931123178050872e-6
allele num: 111968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.142+33T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1313T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.34+33T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.118+33T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.199+33T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.160+33T>C
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/19-58100071-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100071
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100071
    reference: chr 19
allele count: 1
allele frequency: 8.944863859172063e-6
allele num: 111796
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.142+38C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.160+38C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.34+38C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.199+38C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.118+38C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1308C>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4916
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

19-58100073-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100073
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100073
    reference: chr 19
allele count: 197
allele frequency: 1.763052855787646e-3
allele num: 111738
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.199+40A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.160+40A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.142+40A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.34+40A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1306A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.118+40A>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 7.5e0
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6174
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4916
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 46297
  bin: 9.75e1
  variant carriers: 201
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 9.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 2
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-58100078-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58100078
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58100078
    reference: chr 19
allele count: 1
allele frequency: 8.969897025582147e-6
allele num: 111484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.34+45C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.160+45C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.199+45C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-1301C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.118+45C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.142+45C>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4909
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7046
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

19-58101329-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101329
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101329
    reference: chr 19
allele count: 2
allele frequency: 1.813729935612587e-5
allele num: 110270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-50T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143-50T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119-50T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35-50T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200-50T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161-50T>C
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10883
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14625
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4326
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2406
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4813
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1778
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

19-58101330-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101330
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101330
    reference: chr 19
allele count: 1
allele frequency: 9.081497357284268e-6
allele num: 110114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119-49G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-49G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35-49G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161-49G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200-49G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143-49G>T
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13920
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4792
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4525
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

19-58101333-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101333
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101333
    reference: chr 19
allele count: 1
allele frequency: 9.065361254645998e-6
allele num: 110310
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200-46C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-46C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119-46C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143-46C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161-46C>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35-46C>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5265
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2687
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4438
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

19-58101346-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101346
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101346
    reference: chr 19
allele count: 2
allele frequency: 1.788173023621766e-5
allele num: 111846
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161-33A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119-33A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35-33A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-33A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200-33A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143-33A>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10892
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2007
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29937
  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4714
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2552
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 358
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

19-58101347-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101347
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101347
    reference: chr 19
allele count: 1
allele frequency: 8.931920898908519e-6
allele num: 111958
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35-32T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161-32T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143-32T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-32T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200-32T>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119-32T>C
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28313
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 452
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genotype quality: GenotypeQuality
  all individuals: 1770
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 120
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 136
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genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-58101357-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101357
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101357
    reference: chr 19
allele count: 1
allele frequency: 8.800802633200148e-6
allele num: 113626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119-22A>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35-22A>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161-22A>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200-22A>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-22A>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143-22A>T
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 612
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  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

19-58101359-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101359
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101359
    reference: chr 19
allele count: 1
allele frequency: 8.768237934904602e-6
allele num: 114048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35-20C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119-20C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200-20C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161-20C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143-20C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-20C>T
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

19-58101363-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101363
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101363
    reference: chr 19
allele count: 4
allele frequency: 3.460506964270265e-5
allele num: 115590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119-16G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200-16G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34-16G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143-16G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35-16G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161-16G>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13019
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37700
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6655
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD

19-58101379-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101379
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101379
    reference: chr 19
allele count: 1
allele frequency: 8.420201748033883e-6
allele num: 118762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.119G>T
  hgvsp: ENSP00000469971.1:p.Gly40Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.35G>T
  hgvsp: ENSP00000468937.1:p.Gly12Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.34G>T
  hgvsp: ENSP00000303820.4:p.Val12Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.200G>T
  hgvsp: ENSP00000472867.1:p.Gly67Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.143G>T
  hgvsp: ENSP00000472088.1:p.Gly48Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.161G>T
  hgvsp: ENSP00000438487.1:p.Gly54Val
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7050
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly67Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-58101386-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101386
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101386
    reference: chr 19
allele count: 1
allele frequency: 8.367640660039494e-6
allele num: 119508
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.150C>G
  hgvsp: ENST00000600053.1:c.150C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.168C>G
  hgvsp: ENST00000536878.2:c.168C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.42C>G
  hgvsp: ENST00000599456.1:c.42C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.41C>G
  hgvsp: ENSP00000303820.4:p.Ala14Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.207C>G
  hgvsp: ENST00000597850.1:c.207C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.126C>G
  hgvsp: ENST00000598689.1:c.126C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala14Gly
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ

19-58101389-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101389
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101389
    reference: chr 19
allele count: 8
allele frequency: 6.66911200773617e-5
allele num: 119956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.129T>A
  hgvsp: ENSP00000469971.1:p.His43Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.45T>A
  hgvsp: ENSP00000468937.1:p.His15Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.171T>A
  hgvsp: ENSP00000438487.1:p.His57Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.44T>A
  hgvsp: ENSP00000303820.4:p.Met15Lys
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.153T>A
  hgvsp: ENSP00000472088.1:p.His51Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.210T>A
  hgvsp: ENSP00000472867.1:p.His70Gln
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7238
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2588
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2729
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His70Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

19-58101389-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101389
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101389
    reference: chr 19
allele count: 1
allele frequency: 8.336390009670212e-6
allele num: 119956
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.129T>C
  hgvsp: ENST00000598689.1:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.45T>C
  hgvsp: ENST00000599456.1:c.45T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.44T>C
  hgvsp: ENSP00000303820.4:p.Met15Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.153T>C
  hgvsp: ENST00000600053.1:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.210T>C
  hgvsp: ENST00000597850.1:c.210T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.171T>C
  hgvsp: ENST00000536878.2:c.171T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41189
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met15Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

19-58101399-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101399
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101399
    reference: chr 19
allele count: 3
allele frequency: 2.48752093663455e-5
allele num: 120602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.55G>A
  hgvsp: ENSP00000468937.1:p.Asp19Asn
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.139G>A
  hgvsp: ENSP00000469971.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.54G>A
  hgvsp: ENST00000307468.4:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.220G>A
  hgvsp: ENSP00000472867.1:p.Asp74Asn
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.163G>A
  hgvsp: ENSP00000472088.1:p.Asp55Asn
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.181G>A
  hgvsp: ENSP00000438487.1:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp74Asn
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/19-58101408-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101408
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101408
    reference: chr 19
allele count: 13
allele frequency: 1.074522250876149e-4
allele num: 120984
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.172A>C
  hgvsp: ENSP00000472088.1:p.Thr58Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.63A>C
  hgvsp: ENSP00000303820.4:p.Arg21Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.229A>C
  hgvsp: ENSP00000472867.1:p.Thr77Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.148A>C
  hgvsp: ENSP00000469971.1:p.Thr50Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.64A>C
  hgvsp: ENSP00000468937.1:p.Thr22Pro
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.190A>C
  hgvsp: ENSP00000438487.1:p.Thr64Pro
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2433
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr77Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum

19-58101412-C-CACATGAAGATATGTGATCATATCACTTGCTACTCAGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101412
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101449
    reference: chr 19
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: CACATGAAGATATGTGATCATATCACTTGCTACTCAGT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsp: ENSP00000469971.1:p.Ser52HisfsTer5
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsp: ENSP00000472867.1:p.Ser79HisfsTer5
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsp: ENSP00000303820.4:p.Leu23HisfsTer423
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsp: ENSP00000468937.1:p.Ser24HisfsTer5
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsp: ENSP00000438487.1:p.Ser66HisfsTer5
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsp: ENSP00000472088.1:p.Ser60HisfsTer5
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41937
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2599
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser79HisfsTer5
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

19-58101415-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101415
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101415
    reference: chr 19
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.71C>T
  hgvsp: ENSP00000468937.1:p.Ser24Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.179C>T
  hgvsp: ENSP00000472088.1:p.Ser60Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.236C>T
  hgvsp: ENSP00000472867.1:p.Ser79Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.155C>T
  hgvsp: ENSP00000469971.1:p.Ser52Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.197C>T
  hgvsp: ENSP00000438487.1:p.Ser66Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.70C>T
  hgvsp: ENST00000307468.4:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41983
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser79Phe
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-58101421-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101421
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101421
    reference: chr 19
allele count: 24
allele frequency: 1.979512050279606e-4
allele num: 121242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.77A>G
  hgvsp: ENSP00000468937.1:p.Gln26Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.242A>G
  hgvsp: ENSP00000472867.1:p.Gln81Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.76A>G
  hgvsp: ENSP00000303820.4:p.Arg26Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.161A>G
  hgvsp: ENSP00000469971.1:p.Gln54Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.203A>G
  hgvsp: ENSP00000438487.1:p.Gln68Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.185A>G
  hgvsp: ENSP00000472088.1:p.Gln62Arg
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42105
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 9.75e1
  variant carriers: 24
hgvs: p.Gln81Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

19-58101424-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101424
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101424
    reference: chr 19
allele count: 3
allele frequency: 2.473737157181259e-5
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.206A>G
  hgvsp: ENSP00000438487.1:p.Asn69Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.188A>G
  hgvsp: ENSP00000472088.1:p.Asn63Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.79A>G
  hgvsp: ENSP00000303820.4:p.Met27Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.164A>G
  hgvsp: ENSP00000469971.1:p.Asn55Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.245A>G
  hgvsp: ENSP00000472867.1:p.Asn82Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.80A>G
  hgvsp: ENSP00000468937.1:p.Asn27Ser
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42101
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn82Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-58101425-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101425
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101425
    reference: chr 19
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.81T>C
  hgvsp: ENST00000599456.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.207T>C
  hgvsp: ENST00000536878.2:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.189T>C
  hgvsp: ENST00000600053.1:c.189T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.165T>C
  hgvsp: ENST00000598689.1:c.165T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.246T>C
  hgvsp: ENST00000597850.1:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.80T>C
  hgvsp: ENSP00000303820.4:p.Met27Thr
  variant of: http://identifiers.org/hgnc/33104
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42146
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met27Thr
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

19-58101432-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101432
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101432
    reference: chr 19
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.88G>A
  hgvsp: ENSP00000468937.1:p.Val30Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.87G>A
  hgvsp: ENST00000307468.4:c.87G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.172G>A
  hgvsp: ENSP00000469971.1:p.Val58Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.253G>A
  hgvsp: ENSP00000472867.1:p.Val85Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.214G>A
  hgvsp: ENSP00000438487.1:p.Val72Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.196G>A
  hgvsp: ENSP00000472088.1:p.Val66Ile
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42189
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val85Ile
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-58101433-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101433
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101433
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.254T>C
  hgvsp: ENSP00000472867.1:p.Val85Ala
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.215T>C
  hgvsp: ENSP00000438487.1:p.Val72Ala
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.89T>C
  hgvsp: ENSP00000468937.1:p.Val30Ala
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.88T>C
  hgvsp: ENSP00000303820.4:p.Ter30GlnextTer24
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.197T>C
  hgvsp: ENSP00000472088.1:p.Val66Ala
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.173T>C
  hgvsp: ENSP00000469971.1:p.Val58Ala
  variant of: http://identifiers.org/hgnc/33104
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42210
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ter30GlnextTer24
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

19-58101440-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101440
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101440
    reference: chr 19
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.204G>C
  hgvsp: ENST00000600053.1:c.204G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.96G>C
  hgvsp: ENST00000599456.1:c.96G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*5G>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.222G>C
  hgvsp: ENST00000536878.2:c.222G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.261G>C
  hgvsp: ENST00000597850.1:c.261G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.180G>C
  hgvsp: ENST00000598689.1:c.180G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val87Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

19-58101479-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101479
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101479
    reference: chr 19
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.135A>G
  hgvsp: ENST00000599456.1:c.135A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.300A>G
  hgvsp: ENST00000597850.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.219A>G
  hgvsp: ENST00000598689.1:c.219A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.243A>G
  hgvsp: ENST00000600053.1:c.243A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.261A>G
  hgvsp: ENST00000536878.2:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*44A>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42351
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2460
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln100Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

19-58101479-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101479
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101479
    reference: chr 19
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*44A>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.243A>T
  hgvsp: ENSP00000472088.1:p.Gln81His
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.261A>T
  hgvsp: ENSP00000438487.1:p.Gln87His
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.219A>T
  hgvsp: ENSP00000469971.1:p.Gln73His
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.300A>T
  hgvsp: ENSP00000472867.1:p.Gln100His
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.135A>T
  hgvsp: ENSP00000468937.1:p.Gln45His
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42351
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln100His
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

19-58101483-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101483
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101483
    reference: chr 19
allele count: 4
allele frequency: 3.294838635277837e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.304T>G
  hgvsp: ENSP00000472867.1:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*48T>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.139T>G
  hgvsp: ENSP00000468937.1:p.Cys47Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.247T>G
  hgvsp: ENSP00000472088.1:p.Cys83Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.265T>G
  hgvsp: ENSP00000438487.1:p.Cys89Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.223T>G
  hgvsp: ENSP00000469971.1:p.Cys75Gly
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42349
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2628
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Cys102Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

19-58101484-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101484
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101484
    reference: chr 19
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.305G>A
  hgvsp: ENSP00000472867.1:p.Cys102Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.224G>A
  hgvsp: ENSP00000469971.1:p.Cys75Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.266G>A
  hgvsp: ENSP00000438487.1:p.Cys89Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.248G>A
  hgvsp: ENSP00000472088.1:p.Cys83Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.140G>A
  hgvsp: ENSP00000468937.1:p.Cys47Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*49G>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys102Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

19-58101484-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101484
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101484
    reference: chr 19
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*49G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.224G>T
  hgvsp: ENSP00000469971.1:p.Cys75Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.266G>T
  hgvsp: ENSP00000438487.1:p.Cys89Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.140G>T
  hgvsp: ENSP00000468937.1:p.Cys47Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.305G>T
  hgvsp: ENSP00000472867.1:p.Cys102Phe
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.248G>T
  hgvsp: ENSP00000472088.1:p.Cys83Phe
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys102Phe
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

19-58101491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101491
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101491
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.255G>A
  hgvsp: ENSP00000472088.1:p.Met85Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.147G>A
  hgvsp: ENSP00000468937.1:p.Met49Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.231G>A
  hgvsp: ENSP00000469971.1:p.Met77Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.273G>A
  hgvsp: ENSP00000438487.1:p.Met91Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.312G>A
  hgvsp: ENSP00000472867.1:p.Met104Ile
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*56G>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7500
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42352
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met104Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-58101510-GAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101510
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101508
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.253_254delAT
  hgvsp: ENSP00000469971.1:p.Ile85PhefsTer5
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.169_170delAT
  hgvsp: ENSP00000468937.1:p.Ile57PhefsTer5
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.295_296delAT
  hgvsp: ENSP00000438487.1:p.Ile99PhefsTer5
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*78_*79delAT
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.334_335delAT
  hgvsp: ENSP00000472867.1:p.Ile112PhefsTer5
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.277_278delAT
  hgvsp: ENSP00000472088.1:p.Ile93PhefsTer5
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42359
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile112PhefsTer5
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
reference allele: GAT
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

19-58101511-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101511
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101511
    reference: chr 19
allele count: 22
allele frequency: 1.812131396000132e-4
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*76A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.251A>G
  hgvsp: ENSP00000469971.1:p.Asp84Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.167A>G
  hgvsp: ENSP00000468937.1:p.Asp56Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.275A>G
  hgvsp: ENSP00000472088.1:p.Asp92Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.332A>G
  hgvsp: ENSP00000472867.1:p.Asp111Gly
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.293A>G
  hgvsp: ENSP00000438487.1:p.Asp98Gly
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp111Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD

19-58101513-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101513
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101513
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.295A>G
  hgvsp: ENSP00000438487.1:p.Ile99Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.334A>G
  hgvsp: ENSP00000472867.1:p.Ile112Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.169A>G
  hgvsp: ENSP00000468937.1:p.Ile57Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.253A>G
  hgvsp: ENSP00000469971.1:p.Ile85Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.277A>G
  hgvsp: ENSP00000472088.1:p.Ile93Val
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*78A>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile112Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

19-58101525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101525
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101525
    reference: chr 19
allele count: 4
allele frequency: 3.294784356363876e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.346G>A
  hgvsp: ENSP00000472867.1:p.Ala116Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*90G>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.181G>A
  hgvsp: ENSP00000468937.1:p.Ala61Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.307G>A
  hgvsp: ENSP00000438487.1:p.Ala103Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.289G>A
  hgvsp: ENSP00000472088.1:p.Ala97Thr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.265G>A
  hgvsp: ENSP00000469971.1:p.Ala89Thr
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala116Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

19-58101528-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101528
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101528
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.310G>T
  hgvsp: ENSP00000438487.1:p.Asp104Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.268G>T
  hgvsp: ENSP00000469971.1:p.Asp90Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.349G>T
  hgvsp: ENSP00000472867.1:p.Asp117Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*93G>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.184G>T
  hgvsp: ENSP00000468937.1:p.Asp62Tyr
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.292G>T
  hgvsp: ENSP00000472088.1:p.Asp98Tyr
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42335
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp117Tyr
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-58101538-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101538
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101538
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.278G>C
  hgvsp: ENSP00000469971.1:p.Gly93Ala
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.320G>C
  hgvsp: ENSP00000438487.1:p.Gly107Ala
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*103G>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.302G>C
  hgvsp: ENSP00000472088.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.194G>C
  hgvsp: ENSP00000468937.1:p.Gly65Ala
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.359G>C
  hgvsp: ENSP00000472867.1:p.Gly120Ala
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2736
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7502
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly120Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

19-58101540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101540
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101540
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.361C>T
  hgvsp: ENSP00000472867.1:p.Gln121Ter
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.304C>T
  hgvsp: ENSP00000472088.1:p.Gln102Ter
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.196C>T
  hgvsp: ENSP00000468937.1:p.Gln66Ter
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.322C>T
  hgvsp: ENSP00000438487.1:p.Gln108Ter
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*105C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.280C>T
  hgvsp: ENSP00000469971.1:p.Gln94Ter
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln121Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-58101558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101558
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101558
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.298G>A
  hgvsp: ENSP00000469971.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.379G>A
  hgvsp: ENSP00000472867.1:p.Gly127Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.214G>A
  hgvsp: ENSP00000468937.1:p.Gly72Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472088
  ensembl transcript: ENST00000600053
  gene symbol: ZIK1
  hgvsc: ENST00000600053.1:c.322G>A
  hgvsp: ENSP00000472088.1:p.Gly108Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.340G>A
  hgvsp: ENSP00000438487.1:p.Gly114Arg
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*123G>A
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42339
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly127Arg
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

19-58101569-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101569
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101569
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.351A>G
  hgvsp: ENST00000536878.2:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.390A>G
  hgvsp: ENST00000597850.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.225A>G
  hgvsp: ENST00000599456.1:c.225A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.309A>G
  hgvsp: ENST00000598689.1:c.309A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*134A>G
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1567
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr130Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-58101571-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101571
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101571
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.392A>G
  hgvsp: ENSP00000472867.1:p.Asn131Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.353A>G
  hgvsp: ENSP00000438487.1:p.Asn118Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.227A>G
  hgvsp: ENSP00000468937.1:p.Asn76Ser
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*136A>G
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.311A>G
  hgvsp: ENSP00000469971.1:p.Asn104Ser
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn131Ser
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-58101578-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101578
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101578
    reference: chr 19
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.399C>A
  hgvsp: ENSP00000472867.1:p.His133Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.360C>A
  hgvsp: ENSP00000438487.1:p.His120Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*143C>A
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.318C>A
  hgvsp: ENSP00000469971.1:p.His106Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.234C>A
  hgvsp: ENSP00000468937.1:p.His78Gln
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42353
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2736
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His133Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

19-58101578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101578
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101578
    reference: chr 19
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.234C>T
  hgvsp: ENST00000599456.1:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.360C>T
  hgvsp: ENST00000536878.2:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*143C>T
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.399C>T
  hgvsp: ENST00000597850.1:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000469971
  ensembl transcript: ENST00000598689
  gene symbol: ZIK1
  hgvsc: ENST00000598689.1:c.318C>T
  hgvsp: ENST00000598689.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2447
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7489
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His133His
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/19-58101588-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101588
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 58101588
    reference: chr 19
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000472867
  ensembl transcript: ENST00000597850
  gene symbol: ZIK1
  hgvsc: ENST00000597850.1:c.409A>C
  hgvsp: ENSP00000472867.1:p.Lys137Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000438487
  ensembl transcript: ENST00000536878
  gene symbol: ZIK1
  hgvsc: ENST00000536878.2:c.370A>C
  hgvsp: ENSP00000438487.1:p.Lys124Gln
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000303820
  ensembl transcript: ENST00000307468
  gene symbol: ZIK1
  hgvsc: ENST00000307468.4:c.*153A>C
  variant of: http://identifiers.org/hgnc/33104
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000171649
  ensembl protein: ENSP00000468937
  ensembl transcript: ENST00000599456
  gene symbol: ZIK1
  hgvsc: ENST00000599456.1:c.244A>C
  hgvsp: ENSP00000468937.1:p.Lys82Gln
  variant of: http://identifiers.org/hgnc/33104
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42352
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys137Gln
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/19-58101595-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58101595
    reference: chr 19
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
canonical: true
consequence: frameshift
filter: PASS
hgvs: p.His139GlnfsTer7
num of homozygotes: 0
reference allele: AC

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46287
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1696
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.503035964502569e-4
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.193e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.302e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

FS
type: SiteQuality
SIO_000300: 2.474e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 3.439985e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.763718023823472e-5
allele num: 10242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.440302e6

FS
type: SiteQuality
SIO_000300: 1.386e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.169e1

MQRankSum
type: SiteQuality
SIO_000300: 5.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64308
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9888
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e0

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

QD
type: SiteQuality
SIO_000300: 1.719e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.624e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

DP
type: SiteQuality
SIO_000300: 3.443072e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55337392817199e-5
allele num: 64376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.12e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e0

VQSLOD
type: SiteQuality
SIO_000300: -7.224e-1

FS
type: SiteQuality
SIO_000300: 3.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 3.444255e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552553951249806e-5
allele num: 64410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 3.445789e6

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

FS
type: SiteQuality
SIO_000300: 4.225e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.011e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.977e0

QD
type: SiteQuality
SIO_000300: 1.414e1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

QD
type: SiteQuality
SIO_000300: 1.34e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.312e0

DP
type: SiteQuality
SIO_000300: 3.458784e6

VQSLOD
type: SiteQuality
SIO_000300: 4.78e-1

FS
type: SiteQuality
SIO_000300: 8.157e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.175317256924075e-5
allele num: 64774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 1.263e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64838
num of homozygotes: 0

Other
type: Population
allele count: 0
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Latino
type: Population
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allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.07e1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

DP
type: SiteQuality
SIO_000300: 3.462094e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 1.736111111111111e-4
allele num: 11520
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.918e0

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.464026e6

FS
type: SiteQuality
SIO_000300: 2.49e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65136
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.788376939106274e-4
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.471853e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.568e1

MQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.33e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.484677e6

FS
type: SiteQuality
SIO_000300: 8.359e0

MQRankSum
type: SiteQuality
SIO_000300: -1.295e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.266e-1

MQ
type: SiteQuality
SIO_000300: 5.99e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.247e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
all individuals: 686
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.57763671875e-5
allele num: 65536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.471886959081543e-4
allele num: 13588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.5e-1

DP
type: SiteQuality
SIO_000300: 3.485606e6

QD
type: SiteQuality
SIO_000300: 1.34e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.99e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.55e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.04989630352568e-5
allele num: 65576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.451589490492089e-4
allele num: 13778
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.586e0

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

FS
type: SiteQuality
SIO_000300: 1.238e0

DP
type: SiteQuality
SIO_000300: 3.487051e6

QD
type: SiteQuality
SIO_000300: 1.331e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 46280
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variant carriers: 2

GenotypeQuality
all individuals: 4013
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520635017183176e-5
allele num: 65762
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.968e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.82e0

QD
type: SiteQuality
SIO_000300: 1.428e1

VQSLOD
type: SiteQuality
SIO_000300: -2.495e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.936e0

DP
type: SiteQuality
SIO_000300: 3.493358e6

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 53
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GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.040068097525384e-5
allele num: 65788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.687e-1

DP
type: SiteQuality
SIO_000300: 3.494064e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.783e0

QD
type: SiteQuality
SIO_000300: 1.534e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.568e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

FS
type: SiteQuality
SIO_000300: 5.02e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.750241080038572e-4
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14432
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.628e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.85e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.494005e6

QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14418
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.847e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.811e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.27e-1

DP
type: SiteQuality
SIO_000300: 3.492685e6

QD
type: SiteQuality
SIO_000300: 1.347e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.53e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
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Other
type: Population
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allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65440
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

DP
type: SiteQuality
SIO_000300: 3.47358e6

MQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

FS
type: SiteQuality
SIO_000300: 1.705e0

VQSLOD
type: SiteQuality
SIO_000300: 7.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.35e-1

QD
type: SiteQuality
SIO_000300: 1.508e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.924e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1693
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65302
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.71962328238382e-5
allele num: 12954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e-1

FS
type: SiteQuality
SIO_000300: 3.567e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 3.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

QD
type: SiteQuality
SIO_000300: 1.567e1

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3490
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 322
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46276
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 309
bin: 3.25e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534118802160039e-5
allele num: 65184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.892659826361483e-5
allele num: 12670
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.176470588235294e-3
allele num: 850
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.459642e6

MQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.239e0

VQSLOD
type: SiteQuality
SIO_000300: -9.205e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
SIO_000300: 2.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

QD
type: SiteQuality
SIO_000300: 6.29e0

GenotypeQuality
all individuals: 669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46276
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 6
allele frequency: 5.207429265752473e-4
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.688929832642407e-4
allele num: 65130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.456981e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.53e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

GenotypeQuality
all individuals: 426
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46272
bin: 9.75e1
variant carriers: 17

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.645373596593109e-3
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65096
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 3.455704e6

QD
type: SiteQuality
SIO_000300: 1.2e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.951e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

GenotypeQuality
all individuals: 1693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3417
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.695559433779329e-5
allele num: 10314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.348e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.245e0

FS
type: SiteQuality
SIO_000300: 2.232e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.14e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e0

DP
type: SiteQuality
SIO_000300: 3.448243e6

VQSLOD
type: SiteQuality
SIO_000300: -3.197e-1

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.731413001167769e-5
allele num: 10276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.16e1

MQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

FS
type: SiteQuality
SIO_000300: 6.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 3.439999e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e0

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46263
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.44e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

FS
type: SiteQuality
SIO_000300: 3.818e0

DP
type: SiteQuality
SIO_000300: 3.436919e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

GenotypeQuality
all individuals: 153
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46257
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554339716488436e-5
allele num: 64336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

QD
type: SiteQuality
SIO_000300: 1.341e1

MQRankSum
type: SiteQuality
SIO_000300: -5.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 5.545e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

DP
type: SiteQuality
SIO_000300: 3.432899e6

VQSLOD
type: SiteQuality
SIO_000300: 4.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

GenotypeQuality
all individuals: 1302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46256
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555016483174721e-5
allele num: 64308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.249e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.355e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.432344e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

QD
type: SiteQuality
SIO_000300: 2.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

GenotypeQuality
all individuals: 1303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1925
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46254
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555597038143239e-5
allele num: 64284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.29e-1

DP
type: SiteQuality
SIO_000300: 3.430868e6

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

QD
type: SiteQuality
SIO_000300: 1.344e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46248
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 984
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.01461038961039e-4
allele num: 9856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64230
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.561e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.025e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 3.4289e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

QD
type: SiteQuality
SIO_000300: 1.385e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1497
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 956
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 656
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1688
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 7

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 49
allele frequency: 7.630734730744074e-4
allele num: 64214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 138
allele frequency: 1.406154473201549e-2
allele num: 9814
num of homozygotes: 2

Other
type: Population
allele count: 2
allele frequency: 2.5e-3
allele num: 800
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.962576153176675e-4
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.452e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.19e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.65e-2

QD
type: SiteQuality
SIO_000300: 1.442e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

DP
type: SiteQuality
SIO_000300: 3.427692e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

GenotypeQuality
all individuals: 644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558409175913228e-5
allele num: 64168
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.111e0

DP
type: SiteQuality
SIO_000300: 3.422783e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 6.12e0

VQSLOD
type: SiteQuality
SIO_000300: 3.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.349e0

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 1532
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62530
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.424242424242424e-4
allele num: 8250
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.557e1

VQSLOD
type: SiteQuality
SIO_000300: 8.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

FS
type: SiteQuality
SIO_000300: 8.369999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.72e-1

DP
type: SiteQuality
SIO_000300: 1.245179e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1036
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variant carriers: 0

GenotypeQuality
all individuals: 4341
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.21447656060238e-4
allele num: 8234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.117e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

DP
type: SiteQuality
SIO_000300: 1.248648e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.265e1

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17087
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variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598005688900252e-5
allele num: 62578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8238
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.67e-1

DP
type: SiteQuality
SIO_000300: 1.26231e6

VQSLOD
type: SiteQuality
SIO_000300: -4.528e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.79e-1

QD
type: SiteQuality
SIO_000300: 9.109999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2248
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GenotypeQuality
all individuals: 3003
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12018
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9956
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.395209580838323e-4
allele num: 8350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 6.86e0

VQSLOD
type: SiteQuality
SIO_000300: -1.353e0

QD
type: SiteQuality
SIO_000300: 1.057e1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-2

MQ
type: SiteQuality
SIO_000300: 5.87e1

DP
type: SiteQuality
SIO_000300: 1.364719e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.19e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63288
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.294625082946251e-5
allele num: 12056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.759e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.351e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

FS
type: SiteQuality
SIO_000300: 3.617e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.370999e6

MQ
type: SiteQuality
SIO_000300: 5.919e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 289
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GenotypeQuality
all individuals: 2711
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.928514694201747e-5
allele num: 10072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63998
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

QD
type: SiteQuality
SIO_000300: 1.061e1

DP
type: SiteQuality
SIO_000300: 1.429586e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.684e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 612
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.178967224711153e-4
allele num: 8482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12760
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.441486e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.413e0

QD
type: SiteQuality
SIO_000300: 9.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.809e0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.68e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1515
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

Latino
type: Population
allele count: 0
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allele num: 11246
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.223539875481767e-4
allele num: 13492
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544401544401544e-5
allele num: 64750
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 862
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.88e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.46977e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.078e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-5
allele num: 65860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
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allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.891e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.399e0

ReadPosRankSum
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SIO_000300: -1.6e0

VQSLOD
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SIO_000300: 8.4e-1

QD
type: SiteQuality
SIO_000300: 1.235e1

GenotypeQuality
all individuals: 202
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2558
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40739
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.448284756254837e-5
allele num: 15508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66074
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.705e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.527178e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 1.699e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.486e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41189
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2406
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.208386200229593e-4
allele num: 66204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

QD
type: SiteQuality
SIO_000300: 1.177e1

FS
type: SiteQuality
SIO_000300: 2.872e0

DP
type: SiteQuality
SIO_000300: 1.53189e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

GenotypeQuality
all individuals: 2588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2729
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2406
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.334726973267453e-5
allele num: 15786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.07e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

FS
type: SiteQuality
SIO_000300: 2.872e0

MQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

DP
type: SiteQuality
SIO_000300: 1.53189e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7327
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 640
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.857355126300148e-4
allele num: 16152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.403e1

MQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.74e-1

FS
type: SiteQuality
SIO_000300: 3.441e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.233e0

DP
type: SiteQuality
SIO_000300: 1.542174e6

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7396
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2729
bin: 9.75e1
variant carriers: 13

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.155179052753177e-3
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

QD
type: SiteQuality
SIO_000300: 1.362e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

DP
type: SiteQuality
SIO_000300: 1.548544e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

FS
type: SiteQuality
SIO_000300: 5.53e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7415
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502087902184036e-5
allele num: 66574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.547e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.33e-1

DP
type: SiteQuality
SIO_000300: 1.551035e6

MQ
type: SiteQuality
SIO_000300: 5.576e1

FS
type: SiteQuality
SIO_000300: 5.9163e1

VQSLOD
type: SiteQuality
SIO_000300: -7.268e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2606
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2728
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501817198810561e-5
allele num: 66586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.131e1

FS
type: SiteQuality
SIO_000300: 2.692e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.213e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.945e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.21e-1

DP
type: SiteQuality
SIO_000300: 1.551794e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.626e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.301518698601357e-4
allele num: 66636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

DP
type: SiteQuality
SIO_000300: 1.554488e6

QD
type: SiteQuality
SIO_000300: 1.18e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.817e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7449
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2729
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.50112528132033e-5
allele num: 66650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.55e-2

MQ
type: SiteQuality
SIO_000300: 5.897e1

QD
type: SiteQuality
SIO_000300: 1.272e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

DP
type: SiteQuality
SIO_000300: 1.554499e6

FS
type: SiteQuality
SIO_000300: 1.257e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.11e-2

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2726
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7450
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.46e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.192e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 1.7466e1

DP
type: SiteQuality
SIO_000300: 1.554595e6

VQSLOD
type: SiteQuality
SIO_000300: -3.203e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 2449
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

VQSLOD
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

BaseQRankSum
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SIO_000300: -2.972e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.27e-1

DP
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SIO_000300: 1.555756e6

QD
type: SiteQuality
SIO_000300: 1.422e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 4.91e-1

MQ
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ClippingRankSum
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SIO_000300: -6.0e-1

MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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FS
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
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African
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allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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FS
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: -5.7e-1

DP
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SIO_000300: 1.557117e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
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QD
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SIO_000300: 1.576e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.117e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 8.179999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.117e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.45e-1

DP
type: SiteQuality
SIO_000300: 1.559073e6

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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VQSLOD
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SIO_000300: 2.59e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e-2

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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FS
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele num: 6614
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South Asian
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Other
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East Asian
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allele num: 8654
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ClippingRankSum
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MQRankSum
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MQ
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FS
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ReadPosRankSum
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VQSLOD
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
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allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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African
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Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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FS
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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Other
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East Asian
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African
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QD
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BaseQRankSum
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DP
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ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 22
allele frequency: 1.332687181972377e-3
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

FS
type: SiteQuality
SIO_000300: 1.127e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

DP
type: SiteQuality
SIO_000300: 1.560671e6

QD
type: SiteQuality
SIO_000300: 1.359e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

GenotypeQuality
all individuals: 1573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2458
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7506
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.34e0

QD
type: SiteQuality
SIO_000300: 1.631e1

MQRankSum
type: SiteQuality
SIO_000300: -2.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

VQSLOD
type: SiteQuality
SIO_000300: 7.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.27e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.559252e6

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7506
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2738
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.952e0

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.07e-1

FS
type: SiteQuality
SIO_000300: 5.3e-1

QD
type: SiteQuality
SIO_000300: 1.364e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.559299e6

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7504
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.137e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.559116e6

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

MQ
type: SiteQuality
SIO_000300: 5.982e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeQuality
all individuals: 646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42344
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2449
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.559057e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.281e1

FS
type: SiteQuality
SIO_000300: 3.9e0

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42343
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.248e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.146e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

DP
type: SiteQuality
SIO_000300: 1.559002e6

QD
type: SiteQuality
SIO_000300: 6.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 2455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2622
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7501
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 1.336e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

FS
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.63e-1

DP
type: SiteQuality
SIO_000300: 1.5589e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.306e0

GenotypeQuality
all individuals: 7498
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2618
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.926e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 1.372e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

DP
type: SiteQuality
SIO_000300: 1.558656e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.74e-1

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2450
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1567
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42344
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.558693e6

FS
type: SiteQuality
SIO_000300: 3.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.55e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 4.44e0

VQSLOD
type: SiteQuality
SIO_000300: -2.306e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.769e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7489
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2447
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.141e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

FS
type: SiteQuality
SIO_000300: 2.527e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 1.558573e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.941e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42353
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.558573e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

FS
type: SiteQuality
SIO_000300: 2.527e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.941e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
all individuals: 2613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7480
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.616e0

QD
type: SiteQuality
SIO_000300: 1.721e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: 7.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.590000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 1.558413e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1