19-43523072-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523072
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523072
    reference: chr 19
allele count: 4
allele frequency: 3.297446127973885e-5
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.559C>A
  hgvsp: ENSP00000384995.1:p.Leu187Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.193C>A
  hgvsp: ENSP00000385427.1:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.193C>A
  hgvsp: ENSP00000304913.6:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2875C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2875C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*410C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.128C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.283C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.295C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.559C>A
  hgvsp: ENSP00000319140.7:p.Leu187Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3550C>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40277
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu187Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

19-43523072-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523072
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523072
    reference: chr 19
allele count: 2
allele frequency: 1.648723063986942e-5
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.193C>T
  hgvsp: ENSP00000304913.6:p.Leu65Phe
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2875C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*410C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.559C>T
  hgvsp: ENSP00000319140.7:p.Leu187Phe
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.295C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.128C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2875C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.283C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.559C>T
  hgvsp: ENSP00000384995.1:p.Leu187Phe
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.193C>T
  hgvsp: ENSP00000385427.1:p.Leu65Phe
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3550C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40277
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu187Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

19-43523074-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523074
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523074
    reference: chr 19
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.293G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.191G>A
  hgvsp: ENSP00000385427.1:p.Ser64Asn
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.281G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*408G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3552G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.557G>A
  hgvsp: ENSP00000384995.1:p.Ser186Asn
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2877G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.191G>A
  hgvsp: ENSP00000304913.6:p.Ser64Asn
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.557G>A
  hgvsp: ENSP00000319140.7:p.Ser186Asn
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.126G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2877G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40275
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser186Asn
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

19-43523076-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523076
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523076
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.124G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2879G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.555G>C
  hgvsp: ENSP00000384995.1:p.Gln185His
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.279G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.189G>C
  hgvsp: ENSP00000304913.6:p.Gln63His
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.555G>C
  hgvsp: ENSP00000319140.7:p.Gln185His
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*406G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3554G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.189G>C
  hgvsp: ENSP00000385427.1:p.Gln63His
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.291G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2879G>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40275
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln185His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-43523080-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523080
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523080
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.275G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.551G>A
  hgvsp: ENSP00000384995.1:p.Gly184Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.551G>A
  hgvsp: ENSP00000319140.7:p.Gly184Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*402G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.185G>A
  hgvsp: ENSP00000304913.6:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.120G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.287G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.185G>A
  hgvsp: ENSP00000385427.1:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2883G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2883G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3558G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40274
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly184Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

19-43523087-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523087
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523087
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.178A>T
  hgvsp: ENSP00000304913.6:p.Met60Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.268A>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.113A>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.544A>T
  hgvsp: ENSP00000384995.1:p.Met182Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2890A>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3565A>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.178A>T
  hgvsp: ENSP00000385427.1:p.Met60Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.280A>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.544A>T
  hgvsp: ENSP00000319140.7:p.Met182Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*395A>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2890A>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40276
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met182Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

19-43523087-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523087
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523087
    reference: chr 19
allele count: 7
allele frequency: 5.770530723954297e-5
allele num: 121306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.544A>G
  hgvsp: ENSP00000319140.7:p.Met182Val
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.280A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.178A>G
  hgvsp: ENSP00000304913.6:p.Met60Val
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.113A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.178A>G
  hgvsp: ENSP00000385427.1:p.Met60Val
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*395A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3565A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.268A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.544A>G
  hgvsp: ENSP00000384995.1:p.Met182Val
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2890A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2890A>G
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40276
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met182Val
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-43523088-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523088
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523088
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.177G>T
  hgvsp: ENSP00000385427.1:p.Trp59Cys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3566G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2891G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*394G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.543G>T
  hgvsp: ENSP00000319140.7:p.Trp181Cys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.267G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.279G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.543G>T
  hgvsp: ENSP00000384995.1:p.Trp181Cys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2891G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.177G>T
  hgvsp: ENSP00000304913.6:p.Trp59Cys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.112G>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp181Cys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/19-43523089-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523089
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523089
    reference: chr 19
allele count: 5
allele frequency: 4.121807659967356e-5
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*393G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.278G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2892G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.542G>T
  hgvsp: ENSP00000384995.1:p.Trp181Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.176G>T
  hgvsp: ENSP00000385427.1:p.Trp59Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.176G>T
  hgvsp: ENSP00000304913.6:p.Trp59Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.266G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3567G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2892G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.542G>T
  hgvsp: ENSP00000319140.7:p.Trp181Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.111G>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40272
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp181Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-43523089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523089
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523089
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3567G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.176G>A
  hgvsp: ENSP00000304913.6:p.Trp59Ter
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.542G>A
  hgvsp: ENSP00000319140.7:p.Trp181Ter
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.111G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.266G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.176G>A
  hgvsp: ENSP00000385427.1:p.Trp59Ter
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*393G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.278G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.542G>A
  hgvsp: ENSP00000384995.1:p.Trp181Ter
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2892G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2892G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp181Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-43523093-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523093
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523093
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.538T>A
  hgvsp: ENSP00000384995.1:p.Trp180Arg
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.107T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2896T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3571T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.274T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.538T>A
  hgvsp: ENSP00000319140.7:p.Trp180Arg
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.172T>A
  hgvsp: ENSP00000304913.6:p.Trp58Arg
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*389T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.262T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.172T>A
  hgvsp: ENSP00000385427.1:p.Trp58Arg
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2896T>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp180Arg
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/19-43523105-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523105
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523105
    reference: chr 19
allele count: 7
allele frequency: 5.77062586559388e-5
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*377G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.262G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.160G>T
  hgvsp: ENSP00000385427.1:p.Ala54Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.526G>T
  hgvsp: ENSP00000319140.7:p.Ala176Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.526G>T
  hgvsp: ENSP00000384995.1:p.Ala176Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.160G>T
  hgvsp: ENSP00000304913.6:p.Ala54Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.95G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2908G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2908G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.250G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3583G>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40270
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala176Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

19-43523105-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523105
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523105
    reference: chr 19
allele count: 7
allele frequency: 5.77062586559388e-5
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.250G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*377G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2908G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.526G>A
  hgvsp: ENSP00000384995.1:p.Ala176Thr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.160G>A
  hgvsp: ENSP00000385427.1:p.Ala54Thr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.526G>A
  hgvsp: ENSP00000319140.7:p.Ala176Thr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.160G>A
  hgvsp: ENSP00000304913.6:p.Ala54Thr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3583G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.95G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2908G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.262G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40270
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala176Thr
num of homozygotes: 1
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

19-43523106-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523106
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523106
    reference: chr 19
allele count: 13
allele frequency: 1.071687660753149e-4
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.249C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2909C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.94C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.159C>T
  hgvsp: ENST00000306322.7:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*376C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.159C>T
  hgvsp: ENST00000403486.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3584C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.525C>T
  hgvsp: ENST00000320078.7:c.525C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.525C>T
  hgvsp: ENST00000401740.1:c.525C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2909C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.261C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40267
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp175Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

19-43523109-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523109
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523109
    reference: chr 19
allele count: 5
allele frequency: 4.121875618281343e-5
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.156G>A
  hgvsp: ENST00000403486.1:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.156G>A
  hgvsp: ENST00000306322.7:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.522G>A
  hgvsp: ENST00000320078.7:c.522G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.522G>A
  hgvsp: ENST00000401740.1:c.522G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.258G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.246G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3587G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.91G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*373G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2912G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2912G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40263
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro174Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

19-43523110-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523110
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523110
    reference: chr 19
allele count: 3
allele frequency: 2.473125370968806e-5
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*372C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.521C>T
  hgvsp: ENSP00000384995.1:p.Pro174Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.90C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.155C>T
  hgvsp: ENSP00000304913.6:p.Pro52Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2913C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.245C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2913C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.521C>T
  hgvsp: ENSP00000319140.7:p.Pro174Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.155C>T
  hgvsp: ENSP00000385427.1:p.Pro52Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3588C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.257C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40261
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro174Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-43523115-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523115
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523115
    reference: chr 19
allele count: 2
allele frequency: 1.648750247312537e-5
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.240G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.150G>T
  hgvsp: ENSP00000304913.6:p.Glu50Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.85G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3593G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2918G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.516G>T
  hgvsp: ENSP00000384995.1:p.Glu172Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.516G>T
  hgvsp: ENSP00000319140.7:p.Glu172Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.150G>T
  hgvsp: ENSP00000385427.1:p.Glu50Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2918G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.252G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*367G>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40260
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu172Asp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

19-43523117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523117
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523117
    reference: chr 19
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*365G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.250G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2920G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.148G>A
  hgvsp: ENSP00000304913.6:p.Glu50Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.514G>A
  hgvsp: ENSP00000319140.7:p.Glu172Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.514G>A
  hgvsp: ENSP00000384995.1:p.Glu172Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.238G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.148G>A
  hgvsp: ENSP00000385427.1:p.Glu50Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3595G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2920G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.83G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu172Lys
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

19-43523118-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523118
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523118
    reference: chr 19
allele count: 7
allele frequency: 5.77062586559388e-5
allele num: 121304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.147T>C
  hgvsp: ENST00000403486.1:c.147T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.513T>C
  hgvsp: ENST00000401740.1:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.513T>C
  hgvsp: ENST00000320078.7:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3596T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*364T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.249T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.147T>C
  hgvsp: ENST00000306322.7:c.147T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.237T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.82T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2921T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2921T>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40259
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro171Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

19-43523118-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523118
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523117
    reference: chr 19
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.146delC
  hgvsp: ENSP00000304913.6:p.Pro49LeufsTer12
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.512delC
  hgvsp: ENSP00000384995.1:p.Pro171LeufsTer12
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.248delC
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2922delC
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3597delC
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.146delC
  hgvsp: ENSP00000385427.1:p.Pro49LeufsTer12
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.81delC
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.512delC
  hgvsp: ENSP00000319140.7:p.Pro171LeufsTer12
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*363delC
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.236delC
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2922delC
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro171LeufsTer12
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: AG
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-43523119-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523119
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523119
    reference: chr 19
allele count: 13
allele frequency: 1.071705330497436e-4
allele num: 121302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2922C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3597C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.146C>G
  hgvsp: ENSP00000385427.1:p.Pro49Arg
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.146C>G
  hgvsp: ENSP00000304913.6:p.Pro49Arg
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.236C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.512C>G
  hgvsp: ENSP00000384995.1:p.Pro171Arg
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.512C>G
  hgvsp: ENSP00000319140.7:p.Pro171Arg
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2922C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*363C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.248C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.81C>G
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40261
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro171Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

19-43523123-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523123
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523123
    reference: chr 19
allele count: 7
allele frequency: 5.77062586559388e-5
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2926A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.142A>G
  hgvsp: ENSP00000304913.6:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.508A>G
  hgvsp: ENSP00000384995.1:p.Asn170Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.232A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.244A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*359A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.142A>G
  hgvsp: ENSP00000385427.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.508A>G
  hgvsp: ENSP00000319140.7:p.Asn170Asp
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.77A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3601A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2926A>G
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40261
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn170Asp
num of homozygotes: 1
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

19-43523127-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523127
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523127
    reference: chr 19
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.138C>T
  hgvsp: ENST00000403486.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2930C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2930C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.504C>T
  hgvsp: ENST00000401740.1:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.240C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.138C>T
  hgvsp: ENST00000306322.7:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*355C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.228C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.504C>T
  hgvsp: ENST00000320078.7:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.73C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3605C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr168Thr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-43523128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523128
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523128
    reference: chr 19
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.503C>T
  hgvsp: ENSP00000384995.1:p.Thr168Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.227C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.72C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2931C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.503C>T
  hgvsp: ENSP00000319140.7:p.Thr168Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.137C>T
  hgvsp: ENSP00000385427.1:p.Thr46Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2931C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.239C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.137C>T
  hgvsp: ENSP00000304913.6:p.Thr46Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*354C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3606C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr168Ile
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

19-43523129-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523129
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523129
    reference: chr 19
allele count: 31
allele frequency: 2.555605018878502e-4
allele num: 121302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.238A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3607A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.502A>G
  hgvsp: ENSP00000384995.1:p.Thr168Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.71A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.136A>G
  hgvsp: ENSP00000304913.6:p.Thr46Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*353A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2932A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.226A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2932A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.136A>G
  hgvsp: ENSP00000385427.1:p.Thr46Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.502A>G
  hgvsp: ENSP00000319140.7:p.Thr168Ala
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40258
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr168Ala
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-43523129-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523129
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523129
    reference: chr 19
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.71A>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.238A>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.502A>C
  hgvsp: ENSP00000384995.1:p.Thr168Pro
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.502A>C
  hgvsp: ENSP00000319140.7:p.Thr168Pro
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.136A>C
  hgvsp: ENSP00000304913.6:p.Thr46Pro
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*353A>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2932A>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.136A>C
  hgvsp: ENSP00000385427.1:p.Thr46Pro
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.226A>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3607A>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2932A>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr168Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ

19-43523138-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523138
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523138
    reference: chr 19
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2941G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.127G>C
  hgvsp: ENSP00000385427.1:p.Val43Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.229G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3616G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.62G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*344G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.493G>C
  hgvsp: ENSP00000384995.1:p.Val165Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.493G>C
  hgvsp: ENSP00000319140.7:p.Val165Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.127G>C
  hgvsp: ENSP00000304913.6:p.Val43Leu
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2941G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.217G>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40251
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val165Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

19-43523139-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523139
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523139
    reference: chr 19
allele count: 2
allele frequency: 1.649022129876983e-5
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.126T>C
  hgvsp: ENST00000306322.7:c.126T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3617T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.228T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.492T>C
  hgvsp: ENST00000320078.7:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*343T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.492T>C
  hgvsp: ENST00000401740.1:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.216T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.126T>C
  hgvsp: ENST00000403486.1:c.126T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2942T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.61T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2942T>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40251
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr164Thr
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

19-43523140-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523140
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523140
    reference: chr 19
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2943C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.125C>T
  hgvsp: ENSP00000385427.1:p.Thr42Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3618C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.491C>T
  hgvsp: ENSP00000384995.1:p.Thr164Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.491C>T
  hgvsp: ENSP00000319140.7:p.Thr164Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*342C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.60C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.227C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2943C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.125C>T
  hgvsp: ENSP00000304913.6:p.Thr42Ile
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.215C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr164Ile
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

19-43523141-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523141
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523141
    reference: chr 19
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*341A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.226A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.490A>G
  hgvsp: ENSP00000319140.7:p.Thr164Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3619A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.124A>G
  hgvsp: ENSP00000385427.1:p.Thr42Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.490A>G
  hgvsp: ENSP00000384995.1:p.Thr164Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.214A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.124A>G
  hgvsp: ENSP00000304913.6:p.Thr42Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2944A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.59A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2944A>G
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr164Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-43523142-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523142
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523142
    reference: chr 19
allele count: 5
allele frequency: 4.122895261968765e-5
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*340G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3620G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.123G>A
  hgvsp: ENST00000306322.7:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2945G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.58G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.123G>A
  hgvsp: ENST00000403486.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.225G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.489G>A
  hgvsp: ENST00000401740.1:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.489G>A
  hgvsp: ENST00000320078.7:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.213G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2945G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40250
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu163Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

19-43523146-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523146
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523146
    reference: chr 19
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.485T>C
  hgvsp: ENSP00000384995.1:p.Met162Thr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*336T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.54T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.485T>C
  hgvsp: ENSP00000319140.7:p.Met162Thr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3624T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.119T>C
  hgvsp: ENSP00000304913.6:p.Met40Thr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.221T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2949T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.209T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.119T>C
  hgvsp: ENSP00000385427.1:p.Met40Thr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2949T>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40248
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met162Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

19-43523148-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523148
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523148
    reference: chr 19
allele count: 3
allele frequency: 2.474145182839329e-5
allele num: 121254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.117C>A
  hgvsp: ENST00000403486.1:c.117C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.207C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.117C>A
  hgvsp: ENST00000306322.7:c.117C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.219C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.52C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.483C>A
  hgvsp: ENST00000401740.1:c.483C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3626C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.483C>A
  hgvsp: ENST00000320078.7:c.483C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*334C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2951C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2951C>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40248
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala161Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

19-43523149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523149
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523149
    reference: chr 19
allele count: 45
allele frequency: 3.711217774258993e-4
allele num: 121254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.116C>T
  hgvsp: ENSP00000304913.6:p.Ala39Val
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.206C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2952C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2952C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.482C>T
  hgvsp: ENSP00000384995.1:p.Ala161Val
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.116C>T
  hgvsp: ENSP00000385427.1:p.Ala39Val
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.218C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.482C>T
  hgvsp: ENSP00000319140.7:p.Ala161Val
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*333C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3627C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.51C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40252
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala161Val
num of homozygotes: 3
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-43523150-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523150
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523150
    reference: chr 19
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2953G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.205G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.115G>T
  hgvsp: ENSP00000385427.1:p.Ala39Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.481G>T
  hgvsp: ENSP00000384995.1:p.Ala161Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*332G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.481G>T
  hgvsp: ENSP00000319140.7:p.Ala161Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.217G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3628G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.115G>T
  hgvsp: ENSP00000304913.6:p.Ala39Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2953G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.50G>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala161Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-43523155-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523155
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523155
    reference: chr 19
allele count: 5
allele frequency: 4.124731892426992e-5
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.476G>A
  hgvsp: ENSP00000384995.1:p.Arg159Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.476G>A
  hgvsp: ENSP00000319140.7:p.Arg159Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.212G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.110G>A
  hgvsp: ENSP00000304913.6:p.Arg37Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.110G>A
  hgvsp: ENSP00000385427.1:p.Arg37Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3633G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.45G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*327G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.200G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2958G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2958G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40239
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg159Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

19-43523156-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523156
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523156
    reference: chr 19
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.109A>G
  hgvsp: ENSP00000304913.6:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2959A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.211A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.44A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*326A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.199A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2959A>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.109A>G
  hgvsp: ENSP00000385427.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.475A>G
  hgvsp: ENSP00000319140.7:p.Arg159Gly
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.475A>G
  hgvsp: ENSP00000384995.1:p.Arg159Gly
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3634A>G
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg159Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-43523158-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523158
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523158
    reference: chr 19
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.107C>A
  hgvsp: ENSP00000304913.6:p.Pro36His
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.107C>A
  hgvsp: ENSP00000385427.1:p.Pro36His
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*324C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.473C>A
  hgvsp: ENSP00000384995.1:p.Pro158His
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2961C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.473C>A
  hgvsp: ENSP00000319140.7:p.Pro158His
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.197C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3636C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.209C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.42C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2961C>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro158His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

19-43523159-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523159
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523159
    reference: chr 19
allele count: 2
allele frequency: 1.650246711883427e-5
allele num: 121194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.106C>T
  hgvsp: ENSP00000385427.1:p.Pro36Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*323C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.208C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3637C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.106C>T
  hgvsp: ENSP00000304913.6:p.Pro36Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.41C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2962C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2962C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.472C>T
  hgvsp: ENSP00000384995.1:p.Pro158Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.472C>T
  hgvsp: ENSP00000319140.7:p.Pro158Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.196C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro158Ser
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

19-43523160-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523160
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523160
    reference: chr 19
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.207C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.40C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.195C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*322C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.105C>A
  hgvsp: ENSP00000304913.6:p.Asn35Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.471C>A
  hgvsp: ENSP00000319140.7:p.Asn157Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3638C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.471C>A
  hgvsp: ENSP00000384995.1:p.Asn157Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2963C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2963C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.105C>A
  hgvsp: ENSP00000385427.1:p.Asn35Lys
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn157Lys
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

19-43523166-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523166
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523166
    reference: chr 19
allele count: 3
allele frequency: 2.476800634060962e-5
allele num: 121124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.99C>T
  hgvsp: ENST00000403486.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*316C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.189C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.465C>T
  hgvsp: ENST00000320078.7:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.34C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3644C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2969C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.465C>T
  hgvsp: ENST00000401740.1:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.99C>T
  hgvsp: ENST00000306322.7:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.201C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2969C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn155Asn
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

19-43523166-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523166
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523166
    reference: chr 19
allele count: 5
allele frequency: 4.128001056768271e-5
allele num: 121124
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.465C>A
  hgvsp: ENSP00000384995.1:p.Asn155Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2969C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2969C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.465C>A
  hgvsp: ENSP00000319140.7:p.Asn155Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.189C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.34C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.99C>A
  hgvsp: ENSP00000304913.6:p.Asn33Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.99C>A
  hgvsp: ENSP00000385427.1:p.Asn33Lys
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*316C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.201C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3644C>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn155Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

19-43523170-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523170
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523170
    reference: chr 19
allele count: 3
allele frequency: 2.477864411259416e-5
allele num: 121072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*312G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.95G>A
  hgvsp: ENSP00000385427.1:p.Ser32Asn
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.95G>A
  hgvsp: ENSP00000304913.6:p.Ser32Asn
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2973G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.30G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.461G>A
  hgvsp: ENSP00000319140.7:p.Ser154Asn
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2973G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.461G>A
  hgvsp: ENSP00000384995.1:p.Ser154Asn
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.197G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.185G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3648G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser154Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-43523172-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523172
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523172
    reference: chr 19
allele count: 2
allele frequency: 1.652237129072764e-5
allele num: 121048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.195C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.459C>T
  hgvsp: ENST00000401740.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.93C>T
  hgvsp: ENST00000403486.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.93C>T
  hgvsp: ENST00000306322.7:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2975C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2975C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3650C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.183C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.28C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*310C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.459C>T
  hgvsp: ENST00000320078.7:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser153Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-43523177-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523177
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523177
    reference: chr 19
allele count: 1
allele frequency: 8.267605866693123e-6
allele num: 120954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.88T>G
  hgvsp: ENSP00000385427.1:p.Ser30Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.178T>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3655T>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.88T>G
  hgvsp: ENSP00000304913.6:p.Ser30Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.454T>G
  hgvsp: ENSP00000384995.1:p.Ser152Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.454T>G
  hgvsp: ENSP00000319140.7:p.Ser152Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.190T>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*305T>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.23T>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2980T>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2980T>G
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser152Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

19-43523182-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523182
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523182
    reference: chr 19
allele count: 1
allele frequency: 8.288437629506838e-6
allele num: 120650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3660C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2985C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.449C>A
  hgvsp: ENSP00000384995.1:p.Ser150Tyr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.18C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.83C>A
  hgvsp: ENSP00000385427.1:p.Ser28Tyr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.185C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.449C>A
  hgvsp: ENSP00000319140.7:p.Ser150Tyr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.83C>A
  hgvsp: ENSP00000304913.6:p.Ser28Tyr
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.173C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2985C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*300C>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser150Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

19-43523186-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523186
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523186
    reference: chr 19
allele count: 1
allele frequency: 8.29228651508367e-6
allele num: 120594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3664C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2989C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.169C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.445C>T
  hgvsp: ENSP00000384995.1:p.Pro149Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.445C>T
  hgvsp: ENSP00000319140.7:p.Pro149Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.181C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.14C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.79C>T
  hgvsp: ENSP00000304913.6:p.Pro27Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.79C>T
  hgvsp: ENSP00000385427.1:p.Pro27Ser
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*296C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2989C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro149Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

19-43523187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523187
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523187
    reference: chr 19
allele count: 3
allele frequency: 2.489667878305034e-5
allele num: 120498
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2990G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.13G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.78G>A
  hgvsp: ENST00000403486.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2990G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.180G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3665G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.78G>A
  hgvsp: ENST00000306322.7:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.444G>A
  hgvsp: ENST00000320078.7:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*295G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.444G>A
  hgvsp: ENST00000401740.1:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.168G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Lys148Lys
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-43523190-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523190
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523190
    reference: chr 19
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3668C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.75C>T
  hgvsp: ENST00000306322.7:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2993C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.177C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.441C>T
  hgvsp: ENST00000401740.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.10C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.165C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.441C>T
  hgvsp: ENST00000320078.7:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*292C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2993C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.75C>T
  hgvsp: ENST00000403486.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro147Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-43523192-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523192
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523192
    reference: chr 19
allele count: 1
allele frequency: 8.313104778372627e-6
allele num: 120292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.163C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.8C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.73C>G
  hgvsp: ENSP00000385427.1:p.Pro25Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2995C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.439C>G
  hgvsp: ENSP00000319140.7:p.Pro147Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3670C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.439C>G
  hgvsp: ENSP00000384995.1:p.Pro147Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.73C>G
  hgvsp: ENSP00000304913.6:p.Pro25Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*290C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2995C>G
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.175C>G
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro147Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

19-43523196-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523196
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523196
    reference: chr 19
allele count: 1
allele frequency: 8.333333333333334e-6
allele num: 120000
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.435G>A
  hgvsp: ENST00000401740.1:c.435G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*286G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.69G>A
  hgvsp: ENST00000306322.7:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595312
  gene symbol: PSG11
  hgvsc: ENST00000595312.1:n.4G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.435G>A
  hgvsp: ENST00000320078.7:c.435G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.69G>A
  hgvsp: ENST00000403486.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-2999G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.159G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3674G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.171G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-2999G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu145Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

19-43523200-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523200
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523200
    reference: chr 19
allele count: 1
allele frequency: 8.347663488989432e-6
allele num: 119794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3003T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431T>C
  hgvsp: ENSP00000319140.7:p.Leu144Pro
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431T>C
  hgvsp: ENSP00000384995.1:p.Leu144Pro
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65T>C
  hgvsp: ENSP00000304913.6:p.Val22Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65T>C
  hgvsp: ENSP00000385427.1:p.Val22Ala
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3678T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3003T>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu144Pro
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

19-43523203-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523203
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523203
    reference: chr 19
allele count: 1
allele frequency: 8.354916868577158e-6
allele num: 119690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-3C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-3C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-3C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-3C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-3C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-3C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3681C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-3C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3006C>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3006C>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
hgvs: c.431-3C>T
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-43523203-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523203
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523203
    reference: chr 19
allele count: 1
allele frequency: 8.354916868577158e-6
allele num: 119690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-3C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3681C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3006C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-3C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-3C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-3C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-3C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-3C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-3C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3006C>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.25e1
  variant carriers: 0
hgvs: c.431-3C>A
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

19-43523205-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523205
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523205
    reference: chr 19
allele count: 1
allele frequency: 8.367500627562547e-6
allele num: 119510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-5C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3008C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3683C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-5C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3008C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-5C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-5C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-5C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-5C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-5C>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40236
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
hgvs: c.431-5C>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-43523206-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523206
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523206
    reference: chr 19
allele count: 2
allele frequency: 1.675406704977633e-5
allele num: 119374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-6G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3009G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-6G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-6G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-6G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3009G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-6G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-6G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-6G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3684G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40236
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 6.75e1
  variant carriers: 0
hgvs: c.431-6G>A
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

19-43523213-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523213
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523211
    reference: chr 19
allele count: 25
allele frequency: 2.098829692563427e-4
allele num: 119114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-15_65-14delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-15_155-14delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3018_521-3017delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-15_431-14delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-15_*282-14delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-15_167-14delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-15_65-14delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3693_521-3692delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3018_431-3017delCT
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-15_431-14delCT
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40236
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52091
  bin: 9.75e1
  variant carriers: 23
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: CAG
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-43523216-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523216
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523216
    reference: chr 19
allele count: 2
allele frequency: 1.681491819542298e-5
allele num: 118942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3694T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-16T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-16T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-16T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-16T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-16T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3019T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-16T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-16T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3019T>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40236
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP

19-43523221-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523221
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523221
    reference: chr 19
allele count: 1
allele frequency: 8.417225009258947e-6
allele num: 118804
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3699T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-21T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-21T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-21T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-21T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3024T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-21T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3024T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-21T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-21T>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 40227
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-43523223-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523223
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523223
    reference: chr 19
allele count: 1
allele frequency: 8.423464402439436e-6
allele num: 118716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3026T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-23T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3026T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-23T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3701T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-23T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-23T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-23T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-23T>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-23T>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40227
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-43523229-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523229
    reference: chr 19
allele count: 1059
allele frequency: 8.964548132597434e-3
allele num: 118132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3032G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-29G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-29G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3032G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-29G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-29G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-29G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-29G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3707G>T
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-29G>T
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 3.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 2.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 40229
  bin: 9.75e1
  variant carriers: 743
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 76
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-43523231-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523231
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523231
    reference: chr 19
allele count: 1
allele frequency: 8.464247020585048e-6
allele num: 118144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-31C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-31C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3034C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-31C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-31C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-31C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3034C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-3709C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-31C>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*282-31C>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40046
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

19-43523805-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523805
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523805
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 6
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-605G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-605G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-605G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-605G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3608G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-4283G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-605G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-605G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3608G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-43523884-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523884
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523884
    reference: chr 19
allele count: 1
allele frequency: 1.0e-1
allele num: 10
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-684G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-684G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-684G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.323-20G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3687G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-4362G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-684G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3687G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-684G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-684G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

19-43523892-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523892
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523892
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-4370T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3695T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-692T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3695T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-692T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-692T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-692T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-692T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-692T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.323-28T>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 7.5e0
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

19-43523906-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43523906
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43523906
    reference: chr 19
allele count: 28
allele frequency: 6.363636363636364e-1
allele num: 44
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.155-706T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.65-706T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.65-706T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.167-706T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.323-42T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.431-706T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.431-3709T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.521-4384T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.431-706T>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.521-3709T>C
  variant of: http://identifiers.org/hgnc/9516
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 2.5e0
  variant carriers: 352
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 12
num of homozygotes: 7
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

19-43528801-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43528801
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43528801
    reference: chr 19
allele count: 1
allele frequency: 8.462814393554721e-6
allele num: 118164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.520+42G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000599245
  gene symbol: PSG11
  hgvsc: ENST00000599245.1:n.554G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.64+1660G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.166+1660G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.154+42G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.430+42G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.430+42G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.520+42G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.322+42G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.430+42G>A
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.64+1660G>A
  variant of: http://identifiers.org/hgnc/9516
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47013
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

19-43528802-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43528802
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43528802
    reference: chr 19
allele count: 1
allele frequency: 8.462671157524161e-6
allele num: 118166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000304913
  ensembl transcript: ENST00000306322
  gene symbol: PSG11
  hgvsc: ENST00000306322.7:c.64+1659G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000385427
  ensembl transcript: ENST00000403486
  gene symbol: PSG11
  hgvsc: ENST00000403486.1:c.64+1659G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000595138
  gene symbol: PSG11
  hgvsc: ENST00000595138.1:n.520+41G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472717
  ensembl transcript: ENST00000593983
  gene symbol: PSG11
  hgvsc: ENST00000593983.1:c.322+41G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000319140
  ensembl transcript: ENST00000320078
  gene symbol: PSG11
  hgvsc: ENST00000320078.7:c.430+41G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000597093
  gene symbol: PSG11
  hgvsc: ENST00000597093.1:n.154+41G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000599245
  gene symbol: PSG11
  hgvsc: ENST00000599245.1:n.553G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000472372
  ensembl transcript: ENST00000598133
  gene symbol: PSG11
  hgvsc: ENST00000598133.1:c.430+41G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl protein: ENSP00000384995
  ensembl transcript: ENST00000401740
  gene symbol: PSG11
  hgvsc: ENST00000401740.1:c.430+41G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000488205
  gene symbol: PSG11
  hgvsc: ENST00000488205.1:n.166+1659G>C
  variant of: http://identifiers.org/hgnc/9516
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243130
  ensembl transcript: ENST00000594655
  gene symbol: PSG11
  hgvsc: ENST00000594655.1:n.520+41G>C
  variant of: http://identifiers.org/hgnc/9516
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47013
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52110
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.428363283147159e-4
allele num: 16472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.701e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

VQSLOD
type: SiteQuality
SIO_000300: -2.858e-1

DP
type: SiteQuality
SIO_000300: 6.352303e6

MQ
type: SiteQuality
SIO_000300: 5.558e1

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52110
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.924557351809084e-4
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

DP
type: SiteQuality
SIO_000300: 6.352303e6

MQ
type: SiteQuality
SIO_000300: 5.558e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.858e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.701e0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52107
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.471e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.344e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e0

FS
type: SiteQuality
SIO_000300: 2.342e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

MQ
type: SiteQuality
SIO_000300: 5.681e1

DP
type: SiteQuality
SIO_000300: 6.351416e6

QD
type: SiteQuality
SIO_000300: 1.353e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.815e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52108
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.329e1

MQRankSum
type: SiteQuality
SIO_000300: -5.03e-1

MQ
type: SiteQuality
SIO_000300: 5.856e1

VQSLOD
type: SiteQuality
SIO_000300: -8.189e-1

FS
type: SiteQuality
SIO_000300: 7.335e0

DP
type: SiteQuality
SIO_000300: 6.351185e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.345e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52108
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 5.578e1

FS
type: SiteQuality
SIO_000300: 8.678000000000001e0

QD
type: SiteQuality
SIO_000300: 1.136e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.474e0

DP
type: SiteQuality
SIO_000300: 6.351001e6

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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African
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European (Non-Finnish)
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East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ReadPosRankSum
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SIO_000300: 4.6e-1

BaseQRankSum
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MQ
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FS
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DP
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QD
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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allele frequency: 8.646031471554557e-5
allele num: 11566
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South Asian
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European (Finnish)
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Other
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African
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allele frequency: 9.622786759045419e-5
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European (Non-Finnish)
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allele frequency: 7.495577609210566e-5
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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QD
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MQ
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ReadPosRankSum
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SIO_000300: 4.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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East Asian
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Latino
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European (Non-Finnish)
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MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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DP
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MQ
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66706
num of homozygotes: 0

South Asian
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African
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Latino
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Other
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East Asian
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European (Finnish)
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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DP
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MQ
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -3.4e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

African
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Latino
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East Asian
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European (Finnish)
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Other
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South Asian
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DP
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FS
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MQRankSum
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10392
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East Asian
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Latino
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Other
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South Asian
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European (Non-Finnish)
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European (Finnish)
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QD
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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Other
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South Asian
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MQ
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ClippingRankSum
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InbreedingCoeff
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DP
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FS
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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MQRankSum
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FS
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DP
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BaseQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 3.035454103933948e-4
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Latino
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East Asian
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European (Non-Finnish)
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allele frequency: 5.996462087368453e-5
allele num: 66706
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Other
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66706
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East Asian
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African
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Latino
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Other
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European (Finnish)
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South Asian
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FS
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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African
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European (Finnish)
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FS
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QD
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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African
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Latino
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ReadPosRankSum
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QD
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MQ
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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BaseQRankSum
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MQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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Other
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MQ
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MQRankSum
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QD
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ClippingRankSum
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FS
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DP
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52101
bin: 9.75e1
variant carriers: 13

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.798992564164068e-4
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

QD
type: SiteQuality
SIO_000300: 1.392e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.112e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.18e0

DP
type: SiteQuality
SIO_000300: 6.344867e6

MQ
type: SiteQuality
SIO_000300: 5.562e1

VQSLOD
type: SiteQuality
SIO_000300: -2.34e-2

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 5

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070908207867897e-5
allele num: 16472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.994693131052679e-5
allele num: 66706
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.533e0

MQRankSum
type: SiteQuality
SIO_000300: -6.765e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.539999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.474e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 5.08e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.26e-2

FS
type: SiteQuality
SIO_000300: 5.18e0

DP
type: SiteQuality
SIO_000300: 6.343007e6

QD
type: SiteQuality
SIO_000300: 1.405e1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.536e1

QD
type: SiteQuality
SIO_000300: 1.455e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 6.342306e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

FS
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.652e0

VQSLOD
type: SiteQuality
SIO_000300: -1.794e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.75e-1

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52098
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.062e1

MQ
type: SiteQuality
SIO_000300: 5.526e1

VQSLOD
type: SiteQuality
SIO_000300: -1.034e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.975e0

QD
type: SiteQuality
SIO_000300: 1.336e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.99e-1

DP
type: SiteQuality
SIO_000300: 6.342171e6

GenotypeQuality
all individuals: 6133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52098
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 31
allele frequency: 2.680269756181913e-3
allele num: 11566
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.75e-1

DP
type: SiteQuality
SIO_000300: 6.342607e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.68e-2

MQ
type: SiteQuality
SIO_000300: 5.491e1

VQSLOD
type: SiteQuality
SIO_000300: -4.446e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 1.595e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.595e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.41e0

VQSLOD
type: SiteQuality
SIO_000300: -4.446e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.68e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.75e-1

DP
type: SiteQuality
SIO_000300: 6.342607e6

MQ
type: SiteQuality
SIO_000300: 5.491e1

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 304
bin: 7.25e1
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 52098
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.718e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 4.12e-2

ClippingRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.443e1

MQRankSum
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BaseQRankSum
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SIO_000300: -1.13e-1

QD
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FS
type: SiteQuality
SIO_000300: 2.462e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 52098
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6114
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215066828675577e-4
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 1.6e0

MQRankSum
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SIO_000300: 2.83e0

InbreedingCoeff
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FS
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BaseQRankSum
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SIO_000300: -3.87e-1

DP
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SIO_000300: 6.337168e6

ClippingRankSum
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SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.627e1

QD
type: SiteQuality
SIO_000300: 1.44e1

VQSLOD
type: SiteQuality
SIO_000300: -1.968e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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MQRankSum
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FS
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QD
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16458
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66698
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African
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allele frequency: 0.0e0
allele num: 10392
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Latino
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allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

Other
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ReadPosRankSum
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SIO_000300: 1.77e0

InbreedingCoeff
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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FS
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SIO_000300: 3.201e0

BaseQRankSum
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SIO_000300: 9.449999999999999e0

DP
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QD
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SIO_000300: 1.429e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.458412588621823e-4
allele num: 11566
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 9.5e-3

MQRankSum
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FS
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VQSLOD
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SIO_000300: -2.009e0

ClippingRankSum
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SIO_000300: 3.4e-1

ReadPosRankSum
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SIO_000300: -1.69e-1

QD
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SIO_000300: 1.057e1

MQ
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SIO_000300: 5.059e1

DP
type: SiteQuality
SIO_000300: 6.336486e6

BaseQRankSum
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SIO_000300: -7.415e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10392
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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MQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.498695378340282e-5
allele num: 66686
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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South Asian
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African
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QD
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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Other
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South Asian
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MQ
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VQSLOD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.626416840157298e-4
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.177e1

QD
type: SiteQuality
SIO_000300: 1.35e1

VQSLOD
type: SiteQuality
SIO_000300: -1.227e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.076e0

DP
type: SiteQuality
SIO_000300: 6.330101e6

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

GenotypeQuality
all individuals: 52096
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6025
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

FS
type: SiteQuality
SIO_000300: 4.029e0

DP
type: SiteQuality
SIO_000300: 6.329236e6

MQ
type: SiteQuality
SIO_000300: 5.002e1

QD
type: SiteQuality
SIO_000300: 1.344e1

VQSLOD
type: SiteQuality
SIO_000300: -2.822e0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.678e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.416e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

GenotypeQuality
all individuals: 86
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 300
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6015
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52096
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 3.484e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

MQ
type: SiteQuality
SIO_000300: 4.709e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

DP
type: SiteQuality
SIO_000300: 6.328959e6

VQSLOD
type: SiteQuality
SIO_000300: -1.789e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.817e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.77e-1

QD
type: SiteQuality
SIO_000300: 4.39e0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52097
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5985
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093845216331505e-5
allele num: 16410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

DP
type: SiteQuality
SIO_000300: 6.328565e6

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -9.407e-1

MQ
type: SiteQuality
SIO_000300: 5.639e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

FS
type: SiteQuality
SIO_000300: 1.376e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
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variant carriers: 0

GenotypeQuality
all individuals: 5987
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 299
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variant carriers: 0

GenotypeQuality
all individuals: 202
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 52096
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.916e1

VQSLOD
type: SiteQuality
SIO_000300: -1.501e0

DP
type: SiteQuality
SIO_000300: 6.328455e6

FS
type: SiteQuality
SIO_000300: 2.649e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.686e0

MQRankSum
type: SiteQuality
SIO_000300: -1.438e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.95e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 176
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5890
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.469812630117973e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.326806e6

MQ
type: SiteQuality
SIO_000300: 4.773e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.79e0

VQSLOD
type: SiteQuality
SIO_000300: -2.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e-1

FS
type: SiteQuality
SIO_000300: 5.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

QD
type: SiteQuality
SIO_000300: 1.171e1

GenotypeQuality
all individuals: 52097
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.812319538017325e-4
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.773e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.79e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

FS
type: SiteQuality
SIO_000300: 5.37e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.81e-1

DP
type: SiteQuality
SIO_000300: 6.326806e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.502746675472038e-5
allele num: 66626
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
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BaseQRankSum
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SIO_000300: -8.515000000000001e0

VQSLOD
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MQ
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SIO_000300: 4.645e1

MQRankSum
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SIO_000300: 6.55e-1

InbreedingCoeff
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SIO_000300: 1.11e-2

ClippingRankSum
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SIO_000300: 2.1e-2

FS
type: SiteQuality
SIO_000300: 2.477e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

DP
type: SiteQuality
SIO_000300: 6.325377e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.131207847946045e-5
allele num: 16310
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
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VQSLOD
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ClippingRankSum
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DP
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -7.017e0

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

QD
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SIO_000300: 1.419e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 9.599999999999999e-3

DP
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VQSLOD
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MQ
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SIO_000300: 4.527e1

QD
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ReadPosRankSum
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SIO_000300: 2.22e-1

MQRankSum
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FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -1.553e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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East Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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MQ
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SIO_000300: 4.297e1

MQRankSum
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ClippingRankSum
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SIO_000300: -1.15e-1

FS
type: SiteQuality
SIO_000300: 6.211e0

QD
type: SiteQuality
SIO_000300: 1.139e1

BaseQRankSum
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SIO_000300: -6.734e0

DP
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SIO_000300: 6.313453e6

ReadPosRankSum
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SIO_000300: 1.24e0

VQSLOD
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SIO_000300: -2.348e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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BaseQRankSum
type: SiteQuality
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

South Asian
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African
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allele count: 2
allele frequency: 1.926782273603083e-4
allele num: 10380
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
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InbreedingCoeff
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FS
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MQRankSum
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QD
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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allele num: 66438
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South Asian
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African
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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QD
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Other
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African
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European (Finnish)
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506750241080039e-5
allele num: 66368
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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ClippingRankSum
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DP
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MQRankSum
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BaseQRankSum
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SIO_000300: -8.113e0

FS
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InbreedingCoeff
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QD
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.027e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.656237929702588e-5
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66318
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
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SIO_000300: 9.279999999999999e0

MQ
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SIO_000300: 3.892e1

FS
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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SIO_000300: -4.74e-1

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 15378
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQ
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QD
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MQRankSum
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

ClippingRankSum
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SIO_000300: -4.84e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15378
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66284
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 7.46e0

VQSLOD
type: SiteQuality
SIO_000300: -1.548e0

DP
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SIO_000300: 6.28483e6

BaseQRankSum
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ClippingRankSum
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SIO_000300: -4.84e-1

MQRankSum
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FS
type: SiteQuality
SIO_000300: 1.428e0

ReadPosRankSum
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SIO_000300: 8.54e-1

MQ
type: SiteQuality
SIO_000300: 5.188e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15260
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509798592867711e-5
allele num: 66234
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.044e1

MQRankSum
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SIO_000300: -2.741e0

FS
type: SiteQuality
SIO_000300: 4.674e0

VQSLOD
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QD
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DP
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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SIO_000300: 3.783e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
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East Asian
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allele count: 2
allele frequency: 2.321262766945218e-4
allele num: 8616
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -1.075e1

FS
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DP
type: SiteQuality
SIO_000300: 6.276915e6

QD
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 3.956e1

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 22
allele frequency: 3.326277592984578e-4
allele num: 66140
num of homozygotes: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

African
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Other
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allele num: 890
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South Asian
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DP
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SIO_000300: 6.267279e6

BaseQRankSum
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VQSLOD
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SIO_000300: 3.97e0

MQRankSum
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FS
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QD
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MQ
type: SiteQuality
SIO_000300: 3.827e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.47e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.51372952680815e-5
allele num: 66062
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Other
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QD
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SIO_000300: 9.6e0

InbreedingCoeff
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MQRankSum
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SIO_000300: -1.511e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

FS
type: SiteQuality
SIO_000300: 7.033e0

VQSLOD
type: SiteQuality
SIO_000300: -3.392e0

MQ
type: SiteQuality
SIO_000300: 3.645e1

DP
type: SiteQuality
SIO_000300: 6.263165e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14790
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -3.247e0

MQRankSum
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SIO_000300: -1.449e0

DP
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SIO_000300: 6.256131e6

MQ
type: SiteQuality
SIO_000300: 3.754e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 3.658e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e0

QD
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SIO_000300: 1.616e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.668e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14736
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66034
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MQRankSum
type: SiteQuality
SIO_000300: -1.735e0

MQ
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SIO_000300: 3.85e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.74e0

FS
type: SiteQuality
SIO_000300: 6.113e0

QD
type: SiteQuality
SIO_000300: 1.444e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.885e0

DP
type: SiteQuality
SIO_000300: 6.25341e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 968

GenotypeQuality
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GenotypeQuality
all individuals: 45
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GenotypeQuality
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variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 989
allele frequency: 9.633742450808494e-2
allele num: 10266
num of homozygotes: 76

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.972925393067444e-4
allele num: 65892
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.394116826990102e-4
allele num: 14346
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.272727272727273e-3
allele num: 880
num of homozygotes: 0

Latino
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allele count: 53
allele frequency: 4.593517074016294e-3
allele num: 11538
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

DP
type: SiteQuality
SIO_000300: 6.246975e6

FS
type: SiteQuality
SIO_000300: 7.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.452e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.239e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.517496737382015e-5
allele num: 65898
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
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SIO_000300: 6.216959e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.206e0

MQRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

MQ
type: SiteQuality
SIO_000300: 4.066e1

FS
type: SiteQuality
SIO_000300: 3.656e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

QD
type: SiteQuality
SIO_000300: 1.297e1

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 2
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East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
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Other
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allele num: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
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MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 4.241e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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East Asian
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allele frequency: NaN
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African
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allele frequency: 2.5e-1
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Other
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allele num: 0
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QD
type: SiteQuality
SIO_000300: 1.408e1

MQ
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
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Other
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allele num: 0
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South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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Latino
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allele count: 0
allele frequency: NaN
allele num: 0
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East Asian
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allele count: 0
allele frequency: NaN
allele num: 0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 3.7e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 103

GenotypeQuality
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South Asian
type: Population
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allele frequency: NaN
allele num: 0
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Latino
type: Population
allele count: 2
allele frequency: 1.0e0
allele num: 2
num of homozygotes: 1

European (Finnish)
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allele frequency: NaN
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African
type: Population
allele count: 9
allele frequency: 6.428571428571429e-1
allele num: 14
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 6.071428571428571e-1
allele num: 28
num of homozygotes: 4

East Asian
type: Population
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allele num: 0
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Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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MQ
type: SiteQuality
SIO_000300: 4.85e1

FS
type: SiteQuality
SIO_000300: 2.461e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.632e-1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 5.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

QD
type: SiteQuality
SIO_000300: 2.391e1

GenotypeQuality
all individuals: 1509
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53413
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.591957811470006e-5
allele num: 15170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65436
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.895e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.864e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e0

MQ
type: SiteQuality
SIO_000300: 3.672e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.126e0

DP
type: SiteQuality
SIO_000300: 8.209203e6

VQSLOD
type: SiteQuality
SIO_000300: -3.332e0

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1546
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53413
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.25e1
variant carriers: 0